KEGG   Sander lucioperca (pikeperch): 116041539
Entry
116041539         CDS       T07345                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04010  MAPK signaling pathway
sluc04020  Calcium signaling pathway
sluc04218  Cellular senescence
sluc04260  Cardiac muscle contraction
sluc04261  Adrenergic signaling in cardiomyocytes
sluc04270  Vascular smooth muscle contraction
sluc04530  Tight junction
sluc04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    116041539 (cacna1da)
   04020 Calcium signaling pathway
    116041539 (cacna1da)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116041539 (cacna1da)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116041539 (cacna1da)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    116041539 (cacna1da)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    116041539 (cacna1da)
   04261 Adrenergic signaling in cardiomyocytes
    116041539 (cacna1da)
   04270 Vascular smooth muscle contraction
    116041539 (cacna1da)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sluc04040]
    116041539 (cacna1da)
Ion channels [BR:sluc04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   116041539 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel FAM176
Other DBs
NCBI-GeneID: 116041539
NCBI-ProteinID: XP_031143321
Ensembl: ENSSLUG00000020736
LinkDB
Position
6:complement(3413717..3476874)
AA seq 2126 aa
MSANGPAPDPAPEAPPASTPAPAAAPAPAPVAPPAPPALPAPASTTIPAGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYVP
FPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLELLTKEEKVESEAEGEGIHPSMQGHGGKPGGFDVKALRAFRVLRPLRLVSGVPS
LQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYIPGSDVIAEEEPAP
CAISGHGRQCPINGSVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDA
MGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLK
GYLDWITQAEDIDPDNEDEADEGTKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPPSET
ESVNTENQNGEEEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVII
LVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFD
CFVVCGGITETILVELEVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIA
SLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM
YDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKGD
KKEDEKDDKDEEEEIDDTAAEEEDPEVPSGPRPVISDLIKKEKITPIPEGSAFFIFSTTN
PFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMFTFE
IILKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLR
AINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNSD
ECKGTYILYKEGDVNQPTIHKRLWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAIDS
NRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQR
QCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSALF
NYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVNKLV
EPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYV
ALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVA
MNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVV
PPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPAQNNTAIALQAGLRTLHDIGP
EIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQV
QPPPHYAHMEQPVGRLSRANAMSHPNHHHHHNHHHHRHHNSYGKSPKSTNINLNNANVSS
LPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQGQRRRYYETYVRSHGVDGPHPTIRR
EEEFDEDRFSGEYYSGEEFYEDDSMLSGDRYPNSDTEYETPKGYHHPDSYYDDDEQPLYR
DSRRSPKRRLLPATPQGILPPAACNRRPSFNFECLRRQGSQDELPHQRTALPLHLMQHQV
MAVAGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDHPHRESAASSHVSL
RKSSWYTDDPEFSQRMYSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDPK
FVAATKHEIADACEMTIDEMESAASHLLNGGMAPSVNGVNVFPLLTSRDYELQDTAASYS
DEEPETEPRAPYEEDLADEMICITTL
NT seq 6381 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcctgccccagacccagccccagaggcccctcccgcctcaacccct
gcccctgctgcggccccagccccagcccctgttgcaccacccgcacctcctgccctgcct
gctccagcgtctactaccatcccggcaggtgcgttggcacagaagaagcggcagcagtat
gccaaaagcaagaaacagggcagtaatgccaacagcaggccaccgagggctctgttctgc
ctcaaactcaacaaccccatacgcagggcctgcatcagcctggtggagtggaagccattt
gatatatttatattaattgctatttttgccaactgtatggccttagctgtctatgttccc
ttccctgcagatgattccaactccacaaaccatgacctggaaaccgttgagtatgccttc
ctcatcattttcacaattgagacctttctgaagattattgcttacggcttggtgatgcac
cagaatgcgtacgtgagaaacggttggaacatgctggatttcgtcattgtcgtcatagga
ctcttcagtgttgtcttggagcttttgaccaaagaagagaaggtagaaagcgaagcagaa
ggagaaggtatccatccgtcaatgcaaggacatggaggaaaaccaggtggattcgatgtt
aaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagt
ttacaggtggtgttgaactccatcattaaagccatggtacctctccttcacattgccctc
ctggtcttatttgtcatcatcatctatgcgattatcggcctggagcttttcattggtaaa
atgcacgcaacctgctatattcctggctcagatgtgatagcagaagaggaaccagctcca
tgtgcgatctcagggcatgggcgccaatgccccatcaatggcagcgtgtgcagggaaggc
tggcatggtcccaacggtggcatcaccaactttgacaacttcctgtttgccatgctgaca
gtgtttcagtgtatcaccatggagggctggacggacgtgctatactggatgaatgatgct
atgggccttgagcttccatgggtgtactttgtcagtcttgtgatcttcggctcctttttc
gttcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagagaaggct
aaagcccgtggagacttccagaagctgcgtgagaagcagcagctggaggaggatctgaaa
ggttacttggattggatcactcaggccgaagacatcgaccccgacaacgaggatgaggcc
gatgaggggaccaagcgcaaccgggtgactctggctgaccttactgagaagaagaaagga
aggtttgggtggttcagccagtcgtccgacactcatgcgagcgttccacccagcgaaaca
gaatctgtgaacactgagaatcaaaacggggaggaggagaagacaccatgctgcggacct
ctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgccgttggaacaggttc
tgtcgcaggaagtgccggttggctgtcaaatcggtgcctttctattggctggtcatcatt
ctggtgttcctcaacacgctcaccatatcatcagagcattacaaccagccaatgtggctc
acacaagtacaggatgtggccaacaaggtgctgctagccctgttcacatgtgaaatgttg
gtgaagatgtacagtctcgggctacaggcctattttgtatcactgttcaaccgctttgac
tgctttgtggtgtgtggaggaatcactgaaaccattctggtcgagctggaagtcatgtct
cctctcggtatctctgtgttccgctgcgtccgcctgctgaggatcttcaaggtcacacgt
cactggcagtctttaagtaacctcgtggcgtctctgctcaactccatgaagtccatcgct
tccctgctgctgctgctcttcctcttcatcatcatcttctcgctgctgggcatgcaggtg
ttcggtggaaagttcaactttgacgagacccagaccaagaggagtacatttgacaacttt
ccccaagcccttctcactgtgtttcagatcctgaccggagaagactggaacgctgttatg
tacgatgggatcatggcgtatggaggcccttcctcttctgggatgatcgtgtgcttttac
ttcatcatcctcttcatctgtggaaactatatccttctgaatgtcttcttggctatcgct
gtggacaacttggcagatgcagagtctctcaacacagacgaaggagacaagaaaggggac
aaaaaggaggatgaaaaagatgacaaggatgaagaagaggagattgatgacactgcggca
gaggaggaggatccagaagttccatcggggcctcggccggttatctctgacctaataaag
aaggagaagatcactcctatcccagagggaagcgccttcttcatctttagcaccacaaac
ccgttccgtgtgttttgccacaaactcatcaaccaccacatattcaccaacctcatcctg
gtgttcatcatgctcagctccgtgtcactcgctgctgaggatccgatccgaaacttctca
gctcgcaatattgtcctaggctatgcagattatgtcttcactagtatgtttacatttgag
atcatattgaagatgacaacatatggagcctttctacataaaggggcattctgtaggaat
tacttcaacctcctggacctgttggtggtgggagtttcccttgtctcctttggcattcag
tcctcggccatctctgtggtgaagattcttagggtcctgcgtgttcttcgaccccttcgg
gccatcaaccgggccaaaggcctaaagcacgtggtgcagtgcgtgtttgtggccatcaga
actatcggtaacatcatgatcgtcaccactctgctccagttcatgttcgcctgtataggg
gtgcagctatttaagggaaaattctatcgctgcacggatgaagccaagtccaactcagat
gagtgcaagggcacctacatcctgtataaggaaggagatgtgaaccagccaaccatccac
aaacgactgtggcacaacagcgacttcaacttcgacaacgtcctcatggctatgatggct
ctgttcaccgtgtccacttttgaaggctggccttctttactgtacaaggcaatcgactcc
aacagggagaacctgggtcccatttacaactaccgtgtggagatttccatcttcttcatc
atctacatcattatcattgctttcttcatgatgaacatctttgtaggttttgtgatcgtc
acatttcaggaacaaggagagaaagagtacaaaaactgtgaactcgacaagaaccagcgt
cagtgtgtggagtacgctcttaaggcacgtccgctgaggaggtacatccctaagaacccg
taccagtacaagttctggtatgtggtgaactccactggctttgagtacatcatgtttgtg
ctcattatgctcaacacgctctgcctggctgtacagcactacggacagtcagcgctcttc
aactatgtaatggacattcttaatatggtcttcactgctgtcttcactgtggaaatggtt
ctcaaactcatcgctttcaaacccaggcactatttcgctgatgcttggaacacatttgat
gccttaattgttgttggtagcgtcgtcgatattgctatcactgaagttaataaacttgta
gagccaacggagactcctcaggtggatgagcaggggaacacggaggacagcgctcgcatc
tccatcaccttctttcgtctgtttcgagtcatgcggctggtcaagctcctcagcagaggg
gagggcattcgcactctgctctggactttcatcaaatccttccaggctctgccatatgtt
gctcttctgatagccatgctgttcttcatctacgctgtcatcggcatgcaggtgtttgga
aaggttgccatggtggacggcacacacatcaacagaaacaacaacttccagaccttccct
caggctgtgctccttctcttcaggtgtgccactggagaggcgtggcaggagatcatgttg
gcctgtatgccagggaaactgtgtgacccagagtccgattacaaccctggggaggagatg
acgtgtggcagcggatttgcaataatttacttcatcaccttttacatgctctgcgccttt
ttgattatcaatttgtttgtggccgtcatcatggacaactttgactatctcacacgtgat
tggtccattcttggtccacaccacctcgatgaattcaagagaatttggtcagagtacgac
ccggaagctaagggcagaattaaacatctggatgttgtgacacttcttcgtcgaatccag
cctcctctcggcttcggcaaactgtgccctcacagagtggcttgcaagaggctggtagcc
atgaacatgcctctgaacagtgacggcacagtcatgtttaacgccactttgtttgcactg
gtgcgcactgccctgaagatcaaaaccgaaggtaatctagagcaggccaacgaagagctg
cgagctgtcatcaagaaaatctggaagagaaccagcatgaagcttctggatcaagtggtg
cctcctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgctcacccggcg
cagaacaacacagctatcgcattacaggctggccttcgcacgctgcatgatattgggccc
gaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttattcca
gaggaagacgaggaaatttataggcgtaatggtggactcttcggcaaccatctcatgaac
ggtggtcatcggcgatccaacggccaccagaccaacgccacacagcgacctctgcaggtg
cagcctccacctcactacgcccacatggagcaaccggtgggacgcctgtctcgagccaac
gcaatgtcccaccccaaccaccatcaccaccacaaccatcatcaccaccgccaccacaac
tcctacggaaagtcgcccaaatccaccaacatcaacctcaacaatgccaacgtgtccagt
ctgcccaacggaggacaccatcgttactatgaacatgcacctcccaatggctacccaggt
cttcgcagctcctactacgactacgacaagccccggacaccccagggtcaaagaaggcgc
tactatgagacctatgttaggtcccacggagtcgatggaccccaccccaccatccgcagg
gaggaggagtttgatgaagaccgcttctctggggagtattacagcggggaggagttttat
gaagacgacagtatgctgtcaggggacaggtatccgaacagtgacacggagtatgagact
cccaaaggttaccatcaccccgacagttactatgacgatgacgagcagcctctctaccgc
gactcacggaggtcaccaaagagacggttgcttcctgccacacctcaaggtatcttaccc
cctgcagcatgtaacaggaggccatccttcaactttgagtgtctgcgcagacaaggtagc
caggacgagcttccacatcagcgtactgctctaccactgcaccttatgcagcaccaggta
atggctgtagcaggcctggactccagcagagcccaccgcctctccccgacccgctccacc
cgctcctgggccactccccccgccactccggccagtaaagaccagtcaccatactacacc
cctctcatccgtgtggaccacccgcacagggagagtgctgctagcagccacgtgtctctg
cgcaagagctcctggtacacagatgacccagagttctcccagaggatgtactcacctgtc
cacctgcaggtgccacctgagtaccacaaccagtaccaccagaagagaggcagcgccacc
agccttgtggaagcggtgttgatatcagaaggccttgggagatatgccaaggatcccaag
ttcgtcgctgccacaaagcacgaaatagcagatgcatgtgagatgacaatagatgagatg
gagagtgcagccagccacctgctgaatggagggatggccccgagcgtcaacggggtcaac
gtgttcccccttctgacttcaagggactatgaactgcaggacactgcagccagctacagc
gacgaggagccagagacagaaccgagagctccttatgaggaggacctggcagacgagatg
atctgcatcacgactttatag

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