Sander lucioperca (pikeperch): 116041705
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Entry
116041705 CDS
T07345
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116041705 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116041705 (irf6)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116041705 (irf6)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116041705 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116041705
NCBI-ProteinID:
XP_031143594
Ensembl:
ENSSLUG00000004790
UniProt:
A0A8C9XJQ4
LinkDB
All DBs
Position
6:2673369..2678194
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AA seq
492 aa
AA seq
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MSVTPRRVRLKPWLVAQVDSGRYPGLVWIDREAMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDVCEIPQPL
SNQGSSDAGSWTPHEEDGGEEDIPDTPESLPPYPSNGTSPSPLIMWSPRSSEPSMQPSSC
PPSNGVWPKEEPVKIWPKEEPVDVEMHPTPLIDMPSAPLPDHSMQPPPLPDAMFASPEMW
ISSLPMTDLEVQFLYRGKEMCPTANVSNPQGCRLFYGDLGPMVNQEELFGPVNLEQLRFP
TTEHITNDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLI
ERQRKVKLFCLESFLSGVITHQRSQTSTPPHFEINLCFGEEWPDGRPKERKLIMVQIVPV
VARMISEMFSGDNTRSFDSGSVRLQISIPDIKDNIVTHLKQLYCLLQTHQGQDGWALPPS
SGLNIVQALQAQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcacccctcgacgtgtccgtctgaagccctggctggtcgctcaggtggacagc
ggccgatacccgggtctggtgtggattgaccgtgaggccatgcgcttcaggatcccatgg
aaacacgctacacgacacacaccccagcacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagttccaagagggagttgatgaaccggatcctgcgaagtggaaa
gctcagctcagatgtgccctgaacaaaagtcgagaatttaacctagtctatgatggcacc
aaagaggtccccatgaatcctttgaagatctatgatgtctgcgaaatcccacagcccctc
agcaaccaaggctcttcagacgctggttcatggactccgcatgaggaagatggtggagag
gaagatattccagatacaccagagtctctccctccatacccatccaatggcaccagtcct
tctcctctcattatgtggtctcccaggagctcagagccctccatgcagccttccagttgt
cccccttctaatggggtctggcccaaagaggagcctgttaaaatctggcctaaagaggag
cctgtggatgtggagatgcaccccacacccctgattgacatgccttctgctcctctgcct
gatcactcaatgcagccccctcctctacccgacgccatgtttgcctctccagaaatgtgg
atcagttccctcccgatgacagacctggaggtacaattcctgtacagagggaaggagatg
tgtcccaccgcaaatgtcagtaacccgcagggctgcaggctgttctacggagacctcggc
cctatggtcaaccaggaggagctgttcgggccagttaacctggaacagctgcgctttccg
accacagagcacattaccaacgacaagcaaagggttttcactaaccgcctgctggacgtg
atggacagaggcctaatcctggaggtcagtggtcacgatatctatgcagtgcgtctctgc
cagtgcaaggtgtactggtctggtccttgtgctccaaatccaaatgctccaaatcttata
gagcgccagaggaaggtcaaactcttttgcttggagtcttttctcagtggagtgataacc
caccagcgcagccagacatcaacccctcctcactttgaaatcaacttgtgttttggagag
gagtggcccgatgggaggcccaaagagaggaaacttatcatggttcagattgttccagtg
gtggcccgtatgataagcgagatgttttctggagacaacacgcgatccttcgacagcggc
agtgttcgcctgcagatctcaatcccagatatcaaagacaacatagtgacccacctaaag
cagctgtactgcctgctgcagacccaccagggccaggacggctgggcattgcctcccagc
tcaggcctgaacatcgtccaggctctgcaggcacagtga
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