Sander lucioperca (pikeperch): 116041734
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Entry
116041734 CDS
T07345
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116041734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116041734
Transporters [BR:
sluc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116041734
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116041734
NCBI-ProteinID:
XP_031143640
Ensembl:
ENSSLUG00000014859
LinkDB
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Position
6:4308031..4318521
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AA seq
614 aa
AA seq
DB search
MDQRQNSQVKLNVMALGTRPGHTQPKRQERDQWGSKIEFILAVAGHIVGLGNVWRFPFLC
YKNGGGVFFIPYVLFLFTCGIPLFFLETSLGQYTSQGGITCWRKICPLFEGLGYGSQVVV
LYTGVYYIVILAWTFLYLFSSFRSELPWASCNNSWNTDGCFEHGHNQTSSLHMYGNGTSS
VVEFWERRILGLSGGIEKIGNVRWDLALCLLLAWMLCYFCVWNGVKSTGKVVYFTATFPY
VMLVVLLVRGLTLPGAKDGIMFYLYPDPSRLTDPEVWMDAGSQIFYSYGVCTGVLTSLGS
YNKYSNNCYRDCVYLCLLNSLTSFVAGFAIFSVLGFMAKEQGVDISMVAESGPGLAFIAY
PRAVALMPLPQLWAIFFFIMILFLGLDSEFVLQEALVTTISDMYPDFFQSNCRRKLLLLA
ISVGSFFAGLMMVMEGGLYIFQLFDYYACSGMTLLLFAVLESVCIGWVYGADRQYDNIKD
MIGYRPWPFMKYCWQYFTPAICTCTFLFSLVKYTPLKFNNTYEYPWWGYAIGGFFTLSST
LMVPLWMLYAVSVTPGTLRQRLKVLCTPASDLPTAMLKKTLNTEAFQTFTGLYTLCTTEG
PNDKGKRAPRSTII
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagacaaaactcacaggtgaaactgaatgtgatggctcttgggaccagacca
ggacatactcaacccaaacgtcaggagagggaccagtggggcagtaagattgagttcatc
ctggcagtggccggacacattgttggtctgggaaacgtctggaggtttccattcctttgc
tacaaaaatggaggaggggttttcttcataccttatgttttgtttttgtttacctgtggt
atcccactcttcttcttggagacatctttgggccagtacaccagtcagggtggaataaca
tgttggaggaaaatctgccctctttttgaaggcttaggttatggaagccaagtggttgtt
ttgtacactggggtgtattacatcgttatactggcttggacgtttctctacctgttttca
tccttcaggtctgagcttccatgggccagttgtaacaacagctggaacacagatggctgc
tttgagcatggtcacaatcaaacatcctctctgcacatgtatggaaatggcacgtcttcg
gttgtagaattttgggagaggagaatcttgggcttgtcaggtggcattgagaaaattggc
aatgtgcgttgggacctggccctttgtcttcttcttgcctggatgttgtgttacttctgt
gtctggaatggagtaaagtccacaggaaaggtggtctacttcactgccacatttccgtat
gttatgctggtggtgctccttgttcgtggtcttacattaccaggggccaaagacggaatc
atgttctacctctacccagacccatcccgcctcactgatccggaggtatggatggatgct
ggcagccaaattttctactcctatggagtttgcacaggtgttctgacatcattaggaagt
tacaacaagtacagcaacaactgctacagagactgtgtttacctgtgcctgttaaacagt
ttaaccagctttgtagctggcttcgccatcttttctgtgcttggttttatggcaaaggag
caaggtgtggatatatcaatggtggctgaatcaggtccaggtttggcattcattgcttat
cctcgtgctgtggcactaatgccacttccccagctctgggctattttcttcttcattatg
atcctcttcttaggattagatagtgagtttgtattacaagaggcattggtcacaaccatc
tcggacatgtatccagacttctttcaaagcaattgtcgccgtaaactccttcttcttgcc
atttctgttggaagtttctttgctggccttatgatggtcatggagggaggcctttatatc
ttccagctgtttgactactacgcctgcagtgggatgacactcctactctttgctgttctt
gagtctgtctgtattggatgggtctatggtgcagatcgtcagtatgataatataaaggac
atgattggatatcgaccgtggccttttatgaaatattgttggcagtacttcacaccagct
atctgtacttgcacatttctcttctctttggtcaaatatactccactcaaattcaacaac
acttatgaatacccctggtggggctatgccattggaggatttttcactctctcttcaaca
cttatggttcctttgtggatgctgtatgctgtaagtgtcactccaggaacactgagacag
agactgaaagttctgtgcactccagcaagtgacttacctactgcaatgctaaagaagaca
ttaaatacagaagcatttcagactttcacaggcttatacacactgtgcacgacagaaggt
cccaatgacaaaggcaaaagagctccgcgatcaaccattatctaa
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