Sander lucioperca (pikeperch): 116041849
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Entry
116041849 CDS
T07345
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116041849 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116041849 (xrcc4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116041849 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
DUF3859
bZIP_2
PH_4
MUCL1
Motif
Other DBs
NCBI-GeneID:
116041849
NCBI-ProteinID:
XP_031143787
Ensembl:
ENSSLUG00000014383
LinkDB
All DBs
Position
14:10462165..10503190
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AA seq
336 aa
AA seq
DB search
MHVSVREVHVSSEPDSSFFLRVDWKGRGLGSGFQVLLTDGQDAWRGDVSEAAVCQEAEEL
EMQPERYIQDLEQALTETESSGTYSFTLTPSPPDRRSALTLAYEKVQKDISFRLGSVLLK
AVPEPAEAVREFLIHSLQQGNKLEHLNQKLDEENQRLRQEQQRITAELKRYVEGKEALET
ELYSRFVLVLNEKKAKIRSLQEAVTHLQETSSEGKKKEDSVKSDRTASQEEDDYAGSTDE
EPEEVKSTAAASTSSTRGRSSASPLDDSLKDIPDVAPCRKRRFRQLETPDAEPQSSQRKR
HRTDPQGGSSKQQIPPQRSTNAAAPNCEVEDLFDDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgtcggtgcgggaagtccacgtctcatctgagccggactcttccttcttcctg
cgggtggactggaaggggcggggcttaggttcgggcttccaggtgctgctgactgacgga
caggacgcttggagaggggacgtgagcgaggcagcagtgtgccaggaggcggaggagctg
gagatgcagccggagaggtacatccaggacctggagcaggcgctcaccgagactgaaagc
tccggcacgtacagcttcacgctgacgccgtctccacccgaccgccgctccgcgctcaca
ctggcgtacgagaaggttcagaaggacatctctttccggttgggttcggttctgctgaag
gccgtcccggagccggcggaggcagtgagagagttcctgatccacagcctgcagcaggga
aacaaactggagcaccttaaccaaaaactggacgaggagaaccaaagactgagacaagaa
cagcaacgcatcactgcagaactgaagcgttacgtcgagggtaaagaagccctggaaaca
gagctgtactctcggtttgttttggtcctgaatgagaagaaagctaagatccgaagtcta
caggaagctgtcacacacctgcaggaaaccagttcggagggtaagaaaaaggaggattca
gtcaaatcggaccggacggccagtcaggaagaggatgactacgcaggaagtaccgatgag
gagccggaggaagtgaagtcgactgcagcagcttccacgtcatcgacccggggacgctct
tctgcgagcccattggacgacagccttaaggacatcccagacgtggccccctgtcgcaag
cggcgcttccgccaactcgagacgccggacgccgagccacagagctcccagaggaagaga
cacaggaccgacccccaaggaggatccagtaagcagcagattcccccgcagcgctctaca
aatgctgctgcaccaaattgtgaagtcgaggatctgtttgatgacttttga
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