Sander lucioperca (pikeperch): 116042056
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Entry
116042056 CDS
T07345
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116042056 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116042056 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116042056 (samm50l)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
116042056 (samm50l)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116042056 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
116042056
NCBI-ProteinID:
XP_031144042
Ensembl:
ENSSLUG00000008699
LinkDB
All DBs
Position
20:1570843..1586740
Genome browser
AA seq
470 aa
AA seq
DB search
MGTVHAKSLDPLPMHGRDLGVNPDDLMEPPEPEQESKQEILENKDVVVQHVNIQGLGRTK
EDLLGYEISEVFHAKNLIDVMKKSHIARQRLLRLGVFKEVEVLIDTSEGSDALPNGLDVT
FEVTEVKRLTGSYNTMVGNNEGSMVLGLKLPNMFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGHFERNLTLNMYKVTGQFPWSSLKETDRGVSAELNFPLGMTNHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTLSIDSRNSAIFPSRGALFRLNQELAGYTGGDASFLKED
FELQLNKRLFWDSVLSASLWGGMLCPIGGQPSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQKLA
ECIRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccatgctaagagtctggatcctctcccgatgcatggccgggacttgggc
gtcaaccctgatgacttgatggagcctccagaaccggagcaggagtctaagcaggagatc
ctcgaaaacaaagatgtggtggtccaacatgttaacatccagggtcttggaagaactaaa
gaggatctgctcggctatgagatctctgaggttttccacgccaaaaacctcattgatgtg
atgaaaaagtctcacatcgccagacagaggctgctccgcctgggagtcttcaaagaggtg
gaggtccttatcgatacgtctgaaggttccgatgctcttcccaacggtctggatgtaacg
tttgaggtgacggaggtaaagaggctgacaggaagctacaacaccatggttggcaacaat
gaaggaagcatggtgctgggtctgaagttgcccaacatgttcggtcgagctgagaaactc
accttccagttctcctatgggaccaaggagacgtcctatggcctgtccttcttcaagccc
cagcccggacactttgaacgcaacctcacactcaacatgtacaaagtcaccggtcagttc
ccatggagctccttgaaagagaccgacagaggcgtttctgcagaattaaattttcctctc
gggatgaccaaccacacgttgaagtgggagggtgtgtggagggagctgggctgcctggca
cgcagtgcgtccttcgccgtgcgagaggagagcggacactcgctgaaatctgccctctcg
cacactctgtccatcgattcaaggaattctgccattttccccagcaggggtgccttattc
cggctcaaccaggaactggctggctacacaggaggagacgccagcttcttgaaagaggat
tttgagctgcagctcaacaagcggctcttctgggactcggtcttgtctgcttctctgtgg
ggtgggatgctttgtccaatcggaggacagccgtcctgcatcgccgacaggttctacctc
ggaggtcccaccagtgttcgaggatttgggatgtacagcatcggaccacagagtgaaggt
gactacctgggtggagaggcgtactgggccgggggtctgcacctctacaccccactgccc
ttcagaccgggcaagggcggctttggagaccttttcagaacgcacttcttcctcaacgcc
ggcaatctctgcaacctcaactatggcgaaggtccgcgggcacaccttcagaagctagcc
gagtgtattcgctggtcgtacggagcgggcatcgtgctgcgactcggcaacatcgccaga
ctggagctcaactactgtgtgcccatgggagttcagagtggagacaggatatgtgacggt
gtccagttcggagcaggaatacgcttcctgtga
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