Sander lucioperca (pikeperch): 116042278
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Entry
116042278 CDS
T07345
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116042278 (fxr2)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116042278 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
116042278 (fxr2)
mRNA cycle factors
Stress granule specific factors
116042278 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
DUF150_C
Motif
Other DBs
NCBI-GeneID:
116042278
NCBI-ProteinID:
XP_031144259
Ensembl:
ENSSLUG00000002637
LinkDB
All DBs
Position
17:complement(15130118..15148103)
Genome browser
AA seq
675 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
SSRNSFHKVPIPVPEDLRDICENDNIHKEFRKAIGANCIFYSAQTHELIVLSTNETTVKR
ATLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGESPEAVKQAREYLEFTEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRTGGPGVEREKGYMTDD
SSNSLHTSRTYGGRGRGRRPSNSQYSGYGTNSELSNASESEDLGERDQRPRGIGGDERGS
RRGGRGRGSNPGRGRGGPASKPSNSISSVLRDPDSNPYSLLEGEGELADADISEGMGGDR
RRRSRRRRNDQEPSVMDAAAESDGQAGPSENGLDEEARPQRRNRSRRRRNRGNRPEGGSA
SRDRQPGESVTVADYISRAESQSRQNLPQKENHAGPEPKENGTSATKDERTPSKGSPSKG
KTSASETLTLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggttcgaatggggccttctacaagggttacatc
aaagatgtccacgaagactcgctcacaattgtttttgaaaacaactggcagccagagaga
cagttgcccttcagcgacgtgcggttgcctcctccggccgactaccacaaggaaattggt
gaaggagaggaggtggaggtttactcgagggccaacgaacaggagccatgtggctggtgg
ctggcccgggtccgaatgatgaagggagagttctacgtgattgaatacgcggcatgcgat
gccacatacaacgagattgtcacagcagagcgcatcaggcccctcaatccaaacagccct
tcctctcgaaactccttccacaaggtccccatccctgtcccagaagacctgagggacatc
tgcgaaaatgacaacattcacaaagagttcaggaaagctatcggagccaactgcatcttc
tacagtgcccaaacacacgaactcattgtgctgtctacaaatgaaaccacagtaaagcgt
gcaactcttctgagcgacatgcatttccgcagcatccgtaccaagcttatgctaatgtcc
cgcaacgaagaagccaccaaacatttggagacaagtaagcagttagcgtcagcataccag
gaggaggtgagggtcagggaggacctgatgggcctagccatcggctcccatggtgccaac
atccagcaggcacggaaggtacccggtgtcacagcgatcgagttggaggaggaaagctgc
acgttcaggatctacggagagtccccagaggcagtaaaacaggctagagagtatcttgag
ttcacagaagactactttcaggtacccaggaacctcgtaggcaaagtcatcggcaagaac
ggcaaagtcattcaggagattgtggacaagtcgggcgtggtccgcgtcaggattgaggga
gacaacgacaaaaagcttccccgtgaggaggtaggcaggcagggggcaggcagggacgac
actgccagcagcaaagagggcatggttcccttcgtgttcgtgggaactaaagagaacatc
agcaatgctcaggctctgttggagtaccacgtgtcctatctccaggaagtggagcagctg
cgcctagagcgtctccagattgacgagcagctccgtcagattggggttgggtaccgtgcg
cctcctagtcgaactgggggccctggtgttgaacgggagaaaggctacatgacagatgac
agcagcaactcactccacacctctcgcacctacggaggccgcggcagagggcgtaggccc
tccaacagccagtactctggatatggcacaaactctgaactgtccaatgcttctgagtcc
gaggatcttggcgagcgagaccagaggccccgtggcataggcggcgatgagagaggctcc
cgacgggggggcaggggccgaggctctaacccaggacgaggccgcggagggccagcatcc
aagccttccaactccatcagctcagtgctgagggacccagacagtaacccgtactccctg
ctggagggtgagggagagctggccgacgcagacatcagcgaaggcatgggaggagatcgc
cgccgacgctcccgccgacgccgcaacgaccaggagcccagcgtgatggacgccgctgcg
gagtcggacggccaggccggccccagcgagaacggactggatgaagaggcacgacctcag
cgccgcaaccgaagccgccgccgccgtaaccgcggcaaccgcccagagggaggttcagca
agccgtgacagacagccaggtgaaagtgtgactgttgctgactacatatcccgtgccgag
tcccagagcagacagaacctgccccagaaggaaaaccacgctggccccgagcccaaggag
aacgggaccagcgccacaaaggacgagcgaacgccctccaagggttcccccagcaaaggc
aagacctcggccagcgagaccctgaccttggtcaacggggtctcgtaa
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