Sander lucioperca (pikeperch): 116042375
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Entry
116042375 CDS
T07345
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116042375 (gigyf1a)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116042375 (gigyf1a)
Surveillance factors
Other surveillance factors
116042375 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
116042375
NCBI-ProteinID:
XP_031144395
Ensembl:
ENSSLUG00000022993
LinkDB
All DBs
Position
9:complement(28571756..28597995)
Genome browser
AA seq
1132 aa
AA seq
DB search
MTAETLNFGPECTQNIFWLFEQKLFEDIILDSNKRLRALSSGGSVTSPPPSPAMPKYKLA
EYRYGREEMLALYIKDNKVPEDMQDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSV
AVLRLMGKGVGGAAPAGVVRGRGATRGGRGRGRGEGGFYQRSIEEAEVGFGRSVREIHRS
QSWDDRGERRFEKPLRREVGRPGFEETVGPVVPGRKEYTRADSDNWRILREEQEEEEGVE
PGTNWRLAGARRDVSSLMAVNSLSDGGPRSAGWREHTGPGESRRRKFDFDFRDSEGHGGG
RRRAGSEGQEDDRDGLPEWCTDEEDGEMGTFDSSGAFMTMKKGGKETILEDEFEFKGIEE
EEEEEENFADIERNSAEGDKDNESKECGSAVGDGETKPASPSSSPPALPNCTPPALEPRP
SNAGPAADSPQLNNSHPVKASSMPSDVSDMAPLGGSKAQLSPSAPTSSSLPPPPPSSAAP
LHPPPGGDAEDDEGMKHLQQEAERMVASLQDTSLEEECFTQALQQQQESRNTAAALPLSH
EAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRV
PFAPGPSPPPLLVRQPPPTQRPQPTRGPAGTVSQSSANVEDGEGRMQRRGKLDRQVTGNL
DQDRLKKQQELAAAALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVPDTGSMWDMHTSA
SQPSGGEASLWDITMNPSTQGPTLEQLQKLQQERRDAELRAKREEEEQRKRREEKRRQQE
EQKRRDEEELFRRKQCRQQQELIMKLLQQAPQQQGPGASGSGWSGAPSSGLSKSGKPPAL
ALLEMQQEAERLLKQQQQQRQQQRDRHSGMSMGSSSMGGQWVDGVGMWGGPGGMEGKGGS
GSSSGSMGMWDEAVKNQTGLRGNSNNNMGLKNSRSSPSLSDQYMMRRKRTEEEEKLLKLL
QGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDT
VEAKEFAKQFLERRAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPSTLQSMFQAN
HMGKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNTGECLSLNEMEMVEDY
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatgtacacaaaatatcttttggttgttt
gaacaaaagctatttgaagacatcatcttggactctaacaaaaggctccgtgcactgtcc
agtggggggagtgtgacgtccccccctccttcccccgccatgccaaagtacaagttggcc
gagtaccgctacggccgagaggagatgttagcactttatatcaaagacaacaaggtccca
gaggacatgcaggataaggagtttgctgctattctgcaagatgagcccatgcagccactg
gcactggtgcctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtg
gcggtgctgaggctcatgggaaaaggggtgggcggggctgccccagctggagtggtccga
ggacgaggggccacacgaggtggtcgaggacgaggtcgtggtgaaggtggattctaccaa
agaagtattgaagaagcggaggtgggttttggacgcagtgtccgagagatacaccgcagc
cagagctgggatgaccggggtgagcgtcgatttgagaagccgctgcggcgggaggtgggg
cgtcctggctttgaagaaactgtaggtcccgtggttccaggaaggaaggagtacacaagg
gctgacagcgataactggcgcatcctccgggaggagcaggaggaggaggagggggtggag
ccgggcaccaactggagactcgctggagcccgcagggatgtatcctcactgatggcggtc
aactctttgtcagatggtggtcctcgctcagcaggctggcgagagcatactggtccaggt
gagagtcgtcgtcggaagtttgatttcgatttccgggactctgagggccatggtggtggc
cgccggcgtgcaggcagtgagggacaagaggatgacagggacggcctgccagagtggtgt
acagacgaggaggatggggagatgggcacgtttgactcctctggagctttcatgactatg
aagaagggtggcaaggagacaatcctggaggatgagtttgagtttaaggggatagaggag
gaagaagaagaagaggagaacttcgctgacattgagaggaacagtgctgaaggagacaaa
gacaacgagagtaaagaatgtggctctgcagtaggggatggcgagacaaagccagcatcg
ccttcctcctctcctccagctctcccaaactgtacccctccagctctggagcctcggccc
agcaacgctggcccagcggcggacagccctcagctaaacaacagccaccctgtcaaggcc
agcagcatgcccagtgatgtgtcagacatggctccgctagggggctccaaggcccagctg
agccctagcgcccccacctcttccagtctgcctcccccacccccttcctctgctgctcct
ctccaccctccacctggaggagatgcagaggatgatgagggcatgaagcacctgcagcag
gaggcagagaggatggtggcatcactgcaggacacttctttggaggaggagtgtttcacc
caggcgttgcagcagcagcaggagagcaggaacacagcagctgctctgccgctgtcgcat
gaggccgccatgaagtggttctacaaggacccacagggagaaatccagggtccattcacc
acagtggagatgtgcgagtggttccaggctggctacttcaccatgacccttctggtgaag
cggggctgcgacgagggcttccaaccccttggcgacgtcatcaagatgtggggccgcgtg
cccttcgccccagggccctccccgccgcccctgctggtgagacagccaccaccaacgcag
cgcccgcagcccacccgagggcccgccgggactgtgagtcagagctcagccaacgtagag
gatggggaggggaggatgcagaggagagggaagcttgatagacaggttacgggaaacctg
gaccaggaccgtctgaaaaagcaacaggagctggcagcagcagctctttatcagcagctc
caacagcagcagctattccagctcattaacaggtgcagtgagcagggtatgatgccttcg
atgaacaggtcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagct
tcacagccgtcaggcggtgaagccagtctttgggacataacaatgaatccttctactcag
ggtccaactctcgaacagcttcaaaagctccagcaggagaggcgagacgctgaactcagg
gcgaagcgcgaggaggaggagcagcgtaagaggagggaggagaagaggaggcagcaggag
gagcaaaagaggagggatgaggaggagctcttcagacgcaagcaatgtcgtcagcagcag
gaactgatcatgaagttgctgcagcaggccccccagcagcagggtcctggggcaagcggc
tcaggctggagcggggctccctcctctgggttatccaaatcaggaaagcccccggctctg
gctctgctggaaatgcagcaggaggcggagaggctcctgaagcagcagcagcaacagaga
cagcagcagagagaccgccactccggcatgtcaatgggaagctcctccatgggagggcag
tgggtggatggtgttggcatgtggggcgggcctggaggtatggagggtaagggcggcagt
ggaagctcttcaggcagcatgggcatgtgggacgaggctgtgaagaaccaaaccggcctg
cgtggcaacagcaacaacaacatgggcttgaagaacagccgcagcagcccttcactcagt
gatcagtacatgatgcgtcgtaagcggacggaagaggaggagaagctgctgaagctgctg
cagggcatgaagcctcaggacggcttcactacctggtgtgaacagatgctgcacgctctc
aacacctctgccaacaactcctcctcctctctggatgttgccacaattgtggcatacctg
aaggaggtggagtctccctatgcagtactggacttcatccggtcctatctaggggacaca
gtggaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacagaaagccaac
caacagagacagcagcagcagttatcaaaggaagtggctggattgaacatgaacttccct
ctgcaggactcaatgcgaggtatgaatccaagcaccctgcagtccatgtttcaagctaac
cacatgggcaaggctggtctctatgacaaccaggggggaaagatgaagaagaaacagccc
atgatgctgcactctgaccccagcatcttagggtactcattccacaacacgggcgagtgt
ctgagcctgaatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
