Sander lucioperca (pikeperch): 116042389
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Entry
116042389 CDS
T07345
Symbol
chrnb1l
Name
(RefSeq) cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116042389 (chrnb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116042389 (chrnb1l)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116042389 (chrnb1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116042389
NCBI-ProteinID:
XP_031144426
Ensembl:
ENSSLUG00000001843
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Position
9:29216506..29242372
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AA seq
504 aa
AA seq
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MTVMIGQMKIRMIIHARMNAFIIVCSCLCLTYTGASETERRLHQKLFKNYNMKVRPARYW
EEKVMVRVGMTLSQLVSLNEKNEEMTTNVFMNLAWTDYRLAWNPEEYDDIEVLRIPPNKV
WRPDIYLINNNDGQFDVALYVNVLVYSDGTVNWLPPAIYRSSCSIEVSYFPFDWQNCSMV
FRSYTYDASEVELQYFLDDVGNEIQEIVIDENAFTENGEWAICHKPSRKNVKEDLYEDIT
FYLIIERKPLFYIINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLAD
KVPETSLGIPIIVNYVLFTMILVTFSVILSVVVLNLHHRTPSTHIMPNWVRKVFIHFLPK
YIGMTRPNPEEPLLKEESSDDLPIQSFNGRQPGGEYFFRKINPDLVLPWRGRCESTVQLQ
RLPNTDSYCLVLPPNLKSAISAVTYMAEQLKKQDTDDTMTGDWQFIALVVDRLFLWLFVI
ITTLGTLAMFLDASFNYTPENPFP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgattggacaaatgaagataaggatgatcattcatgcgaggatgaacgca
tttatcatcgtatgcagctgcctttgtctcacttacactggagcctcggaaacagagcgg
aggctccatcagaagctgtttaagaactacaacatgaaagtcagaccggctcgttactgg
gaggagaaggtgatggttcgagtggggatgaccctctctcagcttgtcagcttgaacgag
aagaacgaagaaatgacaaccaacgtgttcatgaatctggcgtggacagactacaggctg
gcatggaatccagaagaatatgacgacattgaagttttgaggattcctcccaacaaggtg
tggcgtccagacatctacctcataaacaataatgacggtcagttcgacgtagctctgtac
gtcaacgtcttggtttacagtgatgggacagtcaactggcttcccccagccatctaccgc
agctcctgctctatagaggtgtcgtacttcccatttgactggcagaactgcagcatggtt
ttccgctcgtacacctatgacgcctctgaggtggaactgcagtattttctggatgacgtg
ggcaacgagatccaggagatagttatagatgagaacgctttcactgaaaacggagaatgg
gccatctgtcacaaaccctccagaaagaacgttaaggaggacctttacgaggacatcacc
ttctacctcatcatagagagaaagcctcttttctacatcatcaacatcatcgtgccctgc
atcctcaccagcgtgttggctatatttgtcttctacctacctcctggagcaggagagaag
atgactctctccatttccgtcctcatcgctctgactgtcttcatgcttctgctggctgac
aaggtccccgagacctcccttggcattccaattattgtcaactatgtcttgttcaccatg
atcctggtcacgttctctgtcatcctaagcgtagtcgtccttaatctgcaccaccgaacg
cccagcacacacatcatgcccaactgggttcgaaaggtattcattcacttcttgcccaag
tacattggcatgacaaggccaaacccagaggaacctctgttgaaggaggagtctagtgat
gacttgcccatccaaagcttcaacggcaggcagcctggaggagagtacttctttcgaaag
atcaaccctgatctcgtcttaccttggagaggcaggtgtgagagcacagtgcagctccag
cggctcccaaacactgacagctactgtctggtcctccctcccaacctgaagtcagccatc
tctgcagtgacatacatggccgagcagctgaagaagcaggacacagacgacacgatgaca
ggagactggcagttcatcgccctcgtggtggaccgtctcttcctgtggttgtttgtcatc
atcaccaccctgggcaccctggccatgttcttggacgccagtttcaactatacgcccgag
aaccccttcccatag
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