Sander lucioperca (pikeperch): 116042500
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Entry
116042500 CDS
T07345
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116042500 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116042500 (lmo7a)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116042500 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
116042500
NCBI-ProteinID:
XP_031144579
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All DBs
Position
8:16139764..16188121
Genome browser
AA seq
1481 aa
AA seq
DB search
MEWRQQSTVSYDEAYLEAQRWIEAVTKKTFGSDDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLTACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IYWLGRRAQCERFYDGPYLNFKAFEGLLGTALYKALQESSSQKGSNVRDSGFGDSWYSER
EELFHLREGGGGGHRRDDSLDSLDSLGSRPQSISSETTLKGSSEGCCSDTEADSVFRMAE
NKDSLSYRRSLIITPKASSQFNQFLPTKDKASGYVPAPLRKKRAERNEDSRRSWANPTYT
EDEGTLTRQQQMQESIDGSKSTSDIQIDPTVIQQVRYEELQKYRERIKSTEDKWQDDLSK
WKNRRRSVNSDIVKKKEEREKIEEITYSGNRRSKTFKEMQEERENKGKNSIGGRLASLSY
LDDDNIFDTPVITPRTRTFPARSYTIDTPYYSSEPLEPSRKEAEPPAASPATGRAASPPT
SMEVDIVDSPAGRDATTTITSTITPTSRSFFHSSQSPAAAAAAAAPLQRSPVSERTGTVK
TEETTTTVSSSSSLQKVPEPRPSLLRTQTEVGAPSSGSLYKQKPKPSSMEPKPPGVSQVS
ASLPRSYQRSDSARLTSVITPRPFGTQSSRLTSLPRAATTDDSQKRVNGDATVSKKSSVP
SRYHQFMTSEDETRSQSSSAHSSEEEEEEEEEKEDKTTAKSITSTQSVSPVPPQIKSEAP
VSAAPAKETSQENYCEMRISLNQKPNSSRDFGFQAAWDSTGARITSIQLGSPAEMCQLQV
GDEVLTVNGHQVAEMSYPDWKSCMEEALQEGSLIMDIRHHGKNNWDRDQPSLPFKSHKTI
NLTSTDPILLGSPDKNTVSSSLDFTSRTSMEKLPSKEAPAHPVIDVASNGVNGGFREQSV
TMRNKESEPISLKNLKRRSEFFEKGGSGSSVSALVYLCGGSESAMPDIPVPSIIPSSSRW
SWDPEEERKRQEKWQKEQERLLQEKYKRDQEKLQEEWMKAQQEVAESVHQEEPGSLEVIR
HSISPLPSLSTVNQPTSPPWQEEERKRKEEQERQKQAEEQERQRQAEERRKREEEERELQ
RLQEERERKERQEEEERKMREEEELMWQRRREEERKEERRRQEAAEQQRRERERAFEQQQ
QWADGSHGFANVQSSLSFTDRTKSKSSPQLDEEEKPQRKGVYVQPGGMAHWLLEEQLRSA
RDKQAQSQRAASELETERRNILNAMRYREPERVTGSTLGDKRSQQSVSQAEQERQQILNE
MKKKTPLLMDKSWIRERSSTTSTIQESDVPPMRRGESLDNLDASYNSWRSSWTPRSNSHI
PNYTRPHSALSGSTSFYGGGLGAQRPGSSTLPSSSSMGSLRGGAGTPSSPWSRQSLSPSP
SSPSPTTSPEPTSSEAGAPEQRSRSVSGRKICTFCDTALGKGAAMIIESLGLCYHLGCFK
CIDCKSDLGGSEAGAEVRIRNKQLYCNTCYMRFKAGQPTSM
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtcagcagtccactgtcagctacgacgaagcctacttggaggcgcagaga
tggattgaggcagtaaccaagaaaacatttgggagcgacgacttccgatcagcgctggag
aatggggttctgttgtgtgatctgatcaacaagatcaagcctggtatcatcaagagggtt
aacagactgcccacacctattgctggactggacaaccttaacgtcttcctcacggcctgc
gggaagctcggactaaaggaagcacagctctttcacccaggagatcttcaggacttatcc
acaagagttacagtcaagcatcaagagaccaacaggaggctgaaaaatgtactgatcaca
atttactggcttggtagaagagctcagtgtgaacgtttctacgatggaccttacctgaat
tttaaggcatttgagggcttattgggaacagcgctatacaaggctctgcaggaatcgtcc
agtcagaaaggcagcaacgtcagagacagcggttttggagatagctggtactcagagcga
gaggagctcttccatctgagagaaggaggaggaggaggacacaggagagacgactccctt
gacagcttggactctttgggctcccgaccccagagcatctcatctgaaaccactcttaaa
ggaagcagcgagggttgttgtagtgacactgaagcagactctgtcttcaggatggctgag
aacaaggacagtttgagttaccgacggtcactaatcatcacacccaaggccagctcccag
tttaaccagttcctgcccactaaagacaaagcctcaggctacgtgcctgctccactaaga
aagaaacgggccgaacgcaatgaggacagccggcgcagctgggccaaccccacatacaca
gaggatgaaggcacactcaccagacagcagcaaatgcaagagagtatcgacgggagtaaa
tcaacaagcgatatccagatcgaccccaccgtcatccagcaggttcgttacgaagagctg
cagaagtatcgtgagcggataaagtcaactgaggataagtggcaggatgacctgagcaaa
tggaaaaaccggcgcaggagtgtcaactctgatatagtgaagaagaaagaggaacgggag
aagatagaggagatcacatacagcggcaacagaaggtctaagaccttcaaggagatgcaa
gaggagagagaaaataaaggaaagaacagcattggcggtcgtctcgcatctctgtcttac
ctggacgacgacaacatatttgatacacctgtcattaccccacgtacccggacctttcct
gccaggagctacactattgacactccttactattcctctgaaccgcttgagccttctcgg
aaagaggccgaaccccctgctgcctccccagcgactggcagggccgcttcccctcccacc
tcaatggaagttgacattgtggacagtcctgcaggcagagacgccacaaccaccatcact
tccaccatcactcccaccagccgcagctttttccacagctcccagtctccagcagcagca
gcagcagcagcagcacctttacagaggagtccagtctcagaacgcaccggcacagtcaag
acagaggagaccacaaccacagtctcctcttctagctccctacaaaaggtgcccgagcca
aggccctcattgttgcgcacacagactgaggtgggggccccctcctctggttctctgtac
aaacaaaaacccaagcccagctcaatggaacccaagcctcctggggtgtctcaggtttcc
gcatcccttcccaggagctaccagagatcggatagcgcacgtctgacctcagttatcaca
ccaaggcccttcgggacccagtcatcccgcctcacctcacttccccgagctgctacaacg
gacgactctcagaagcgtgtcaacggcgacgccactgtttctaagaagtcgtcggtgccg
agccgctatcaccagttcatgacctctgaggacgagactcgctctcagtccagctcagcc
cacagcagtgaggaggaagaggaggaggaggaggagaaagaagacaagaccacagcgaag
agcatcacctctactcagagtgtctcacctgtccctcctcagatcaagagtgaagctcca
gtcagtgctgctccagccaaagaaaccagccaggagaactactgtgagatgcggatcagc
ttgaaccagaagcccaacagcagcagagactttggcttccaggcggcctgggactcgaca
ggagctcgcatcacgtccatccagctaggcagcccggcagagatgtgccagcttcaggtc
ggagatgaggtgttaacggtaaacgggcaccaggtggcagaaatgagctacccagactgg
aagtcctgcatggaggaggctctgcaggagggcagtctaatcatggatatacgccatcat
ggcaagaacaactgggacagagatcaaccttccctgccatttaaaagccataagaccatc
aatctgaccagtacggatccgatacttctaggttcccctgacaaaaacactgtcagctcc
agcctggatttcacctcacgcacttccatggaaaagctgccatccaaagaggcccccgcc
catccagtcatcgacgtggcttcaaacggagttaatggaggtttccgtgaacagtcggtg
acgatgaggaacaaagagtcagaacccatatctttgaaaaacttaaaacggaggtcagag
ttttttgaaaaaggtggctcagggtccagtgtcagtgcgctggtctacctctgtggagga
tcagagtctgcaatgccagatatacctgttccttcaatcattccttcttccagccgctgg
tcctgggacccagaggaggagcgcaaaagacaagagaaatggcagaaggagcaggagcgc
ctcctacaggagaaatataagcgcgaccaggagaagttgcaggaggagtggatgaaggct
cagcaggaggttgccgagagcgtacaccaagaagagcctggcagcctggaggtgatcaga
cacagcatcagcccactcccgtccctctctaccgtcaaccagcccacctctcctccgtgg
caagaggaagagagaaagaggaaggaggagcaggagcgccagaagcaggcggaggagcag
gagcgccagaggcaggcggaggagaggaggaagagggaagaggaggagcgggagctgcag
cgtctccaggaggagagagagaggaaagaaaggcaggaggaggaggagaggaagatgagg
gaggaggaagagctgatgtggcagaggaggagagaggaggagaggaaggaggagaggagg
cggcaggaagctgcagagcaacagcgcagagagcgggagagagccttcgagcagcagcag
cagtgggctgatggctcccatggctttgccaatgtccagtcgtcactgtcctttacagac
aggacaaaatctaaatcatctccccagcttgatgaagaagaaaaacctcagagaaaaggt
gtgtatgtgcagccggggggcatggctcactggctgctggaagagcagctgaggagtgca
cgtgacaaacaggcccagagtcagcgggctgcatcagagctagagacggagaggagaaac
atcctcaatgccatgagatacagagagccggaaagagtgacgggcagtacattgggtgat
aaaaggagtcagcagtccgtgtcgcaggcagagcaggagcggcagcagatcctgaacgag
atgaagaagaagactccgttgctgatggacaaaagctggatccgcgagcgctcctccacc
accagcacgatccaggagtctgacgtgccacccatgcgcagaggtgagtctcttgacaac
ttggacgcctcatataattcctggcgctcatcatggacacccagaagcaactctcacatc
ccaaactacactcggcctcactctgccctctctggcagcacttccttttacggtggtggg
ttgggggcccagcggcccggctcctccactctgccttcctcctcctccatgggctccctc
cgaggtggcgcaggaaccccctcatccccttggtcccggcagtcgctatccccctcaccc
tcctctccgtcacccaccacctctccagagcccacatcttctgaggctggcgcccccgag
caacggagcaggtcagtgagtggcaggaaaatctgtacgttctgtgacaccgcactggga
aagggagcagccatgatcatcgagtcacttgggctctgttatcatttgggctgttttaag
tgtatcgactgtaagtcggacctgggaggatcggaagccggggctgaagtcagaatacga
aacaagcagctgtactgtaacacctgctacatgcgattcaaagctggccagccaacctct
atgtga
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integrated database retrieval system
