Sander lucioperca (pikeperch): 116042514
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Entry
116042514 CDS
T07345
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116042514 (pax1a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116042514 (pax1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
116042514
NCBI-ProteinID:
XP_031144558
Ensembl:
ENSSLUG00000023923
LinkDB
All DBs
Position
18:complement(16567161..16571995)
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AA seq
365 aa
AA seq
DB search
MEQNYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQASAQVGLSYNHIYPYSYPNTMSPTGTKMGSPPGVP
MTAGHMSISRGWPSAHTVSNILGIRAFMDPAAIAGAEGYPPKMEDWSSVNRAAFPAAHTV
NGIDKSAIDADIKYAQPSSTLSSYVSACAYSPTNQYGVYSGAAGGYVAPGHHHWQPQSPT
LSHPGGGMSMHAGEIHSPMTFKHQAREGDRKPPTPLSKQQQQQQQQQQHEDLNSVHGLSL
PTSSS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaactatggagaggtgaaccagttaggcggcgtgttcgtcaatgggcgaccc
ctgcccaatgccatacggttaagaatagtggagctggctcagctcgggatcagaccctgc
gatataagccggcaactccgagtctcccacggctgcgtgagcaagattttggcgaggtac
aacgagacgggctccatcttacccggtgccatcggtggaagcaaaccacgggtcacgacg
cctaacgtggtgaaaaatatcagggaatacaaacaaggcgaccccgggatctttgcctgg
gagatccgggacaggcttttggcagatggagtttgtgacaagtacaatgtgccgtcggtt
agctcgatcagcaggattttacgcaacaagattggaaatctctcccagcccaaccagtat
gagagcagtaagcaagcctccgcgcaggtcgggctctcctacaaccacatatacccctat
tcctacccaaacaccatgtcgcccactggcactaaaatgggcagccctcctggagtaccg
atgacggctggacatatgagcatatccaggggctggccttctgcacacaccgttagcaac
atcctcggtatacgggccttcatggatcctgcagccattgctggggcggagggatatcca
ccaaaaatggaggactggagtagcgtcaacagagcagctttccccgctgctcacacggtc
aacgggattgacaaatcagccatagacgccgacataaaatacgctcagccctcctcgaca
ctgtccagttatgtctcggcgtgtgcttactctcccaccaaccagtacggggtgtacagt
ggagcagcaggcggatacgtggccccgggtcaccaccactggcagccgcagagcccgacc
ctgtcccacccaggcggcgggatgagcatgcatgcaggggagatccactcgccgatgacc
ttcaagcatcaggcccgagaaggagacagaaaaccgcccactcccctgagcaagcagcag
cagcagcagcagcagcagcagcaacatgaagacttgaacagtgtgcatggactcagtctc
cctacctcatcatcataa
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