Sander lucioperca (pikeperch): 116042560
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Entry
116042560 CDS
T07345
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116042560
03036 Chromosome and associated proteins [BR:
sluc03036
]
116042560
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116042560
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116042560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
116042560
NCBI-ProteinID:
XP_031144639
Ensembl:
ENSSLUG00000025552
LinkDB
All DBs
Position
4:complement(6732508..6786290)
Genome browser
AA seq
1924 aa
AA seq
DB search
MEEKKKKKQEEKTKTDIAQKKASDLKPKVPEPAPTKPSPGPPHHLHPASPTLPLFSSSSS
SGNGKRASSSSQLPTQTPPQPQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPAGA
LSSLTLSCSSSSSSSSPSSYSTSSTITSSTSPNSTTSTASKHHPDISLQSGSVPQYETSH
WGASLPVDSSSSANSWDKVIIDESDTEAWPSISHSSDPSHPAAPECPLGSASSNADTSAV
TTTTSSSFLSMATGAAGQQAHYPSLKANNNMMTGPGSANTCGNRGWGSDGKQDGMNGGRV
GAPNNWGSPNFNLNLNPNANPSAWPVLGHEGGGGCGIGPNAVSNSQSLPPGINGNGNMGN
GSLGGADNGGGGWIGISANENDQQHPSANTSLSFKMEPSNLNTDRPNHTKQQQDHEPMSP
IHGLTGWGGQSPTESSQLNGDTTGSSVWGSVETKAADSPKDSGWDSTPSSGLSAWGRQGS
GGGSSGSGGWGDWGKSPGGGDASKGWDSVDAGSSGSGQEQQLSSWGQQPRTAPASDGSGD
SSESKSGDRDRSSSTDCTPLFPRQDLDPRVLSNTGWGQTPIRQHTVWEMEEANSDDGKRK
SSSDTIGGSSSNGGPSSVNGGIINPKICPSQRPGSGEKIDSEGSSSSSGWRAPPPQPIQT
GSGWGDPPQSLSKAPNGTTSGWGDPLPSSGPRNGGTPSWGSEDKSPSWDDGQKKSQPTSW
GDGPKSSHGWGNSNGGSNGSSTGEWGEAEVKKNGSSSSMWEGEGGNGGSGGWKESPRGGN
RGGGWDKPAPTVSNTSWGETPRANGPIQGSWGSSKPQESSSSSTGSGGGGSMGSWGGPGT
VKQNTSSWGNGSKQDQGMDPTGWEEPSPPSIRRKMEIDDGTSTWGDPGTYNKTVNMWDRK
NPNNNTGNSGPPPSKNGGGIIPNNNNNHSVGPGNNNHHHTHHMHHHPHHGQPPTHLQHHG
NNNGSSNNGPPHPSVGTQCRPPLANPGWGELPSVQPKSEPAWGEPAAPISSVDNGTSAWG
KPSGGVGGWGDSGHEPSGPYGRANGPTGSAPCKPGPKPMQDGWGNGGEEMGMSTGQWDTE
DGDMWNSPTSQESSSSCNSWGNGPKKGPSKGKMGKPDDAWIINRLIKQLTDMGFPRDPAE
EALKSNNMNLDQAMSALLEKKTDLDKRGMGMSDYSNGMNKPMVCRPSALSKDPSERTSFL
DKDGVLSDDAPPSPFLPSPNLKLPLANSSLSGQGLGQGNPGLAMQNLNNRQIPSGMFGSS
GAAQTRAMQQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTS
PINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQ
HQRQLYQALLMKQQQLPSHSSSSSAGLHPSGGPAGVHGSGKSNLDPYTGPHQAPGLADTL
HTKEPPSSSNAYSTYPLSGLNPNMNVNCMEVGGLSLKEPPQPQSRLSQWTHSNSMDSLSG
NSSNMENNLNKHGAISAASTLCPPGKPPQLEDSYSPYNLMSSSESPNSPLVPSDSWGQGK
NPNEKISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYL
LRDRNGATSPALPLQNGSLPPTSSDWPISGYSSSFSLSSSDGDGSGKLSDMKSTWSPGPI
SQSQASLSHELWKVPQGPRSNAAPSRPPPGLTNNKPSSTWGGNSLGLAQGWSASYSSEGT
TWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEA
AKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGANTTSWQANPGTNQNRMGGAAQ
SHSIGQWSSGGGGGKPSGGDLLWGGVPQYSSLWGPPNGEDARVIGSPTSINTLLPGDLLS
GESM
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaagacggacatcgctcagaaa
aaggcttctgatctgaaacccaaagtgccagagcctgctcccactaagcccagtcccggc
ccaccccaccacctccaccccgccagccctacgctgcccctcttctcctcctcttcttct
tctggcaatggcaaacgcgcctcctccagtagccaactcccgactcagactccccctcag
ccgcagtgccagttgtcctctgccagtgctcgttacccgcccagagaggtgcccccgcgc
ttccgccagcaggagcacaagcagctactgaagagaggccagccactgcctgcaggagcc
ctcagctctctcaccctctcctgttcctcttcttcctcctcctcttcgccttcatcttat
tctacttcttctacgattaccagcagcacatccccgaactctaccacgtccactgcgagc
aaacaccacccagacatatcccttcagagtggctcagttccccagtatgagacctctcat
tggggagcctctttgccagttgacagctcctccagtgccaatagctgggacaaagtgatt
attgacgaaagtgacacagaagcttggccctccatcagccacagtagtgaccccagccac
cccgcagcaccagaatgccccttgggctcagctagctctaacgcagacaccagtgctgtc
actaccactaccagtagtagttttctgagtatggccacaggtgccgcaggccagcaggcc
cactacccttctcttaaagctaacaataacatgatgacgggaccaggatcagccaacaca
tgtggtaatagaggctggggctcagatgggaaacaagatggtatgaatggtggcagagta
ggagcgcccaataactggggctctcccaattttaacttgaacctcaatcccaatgccaac
ccatcagcctggcctgttctgggacatgagggtggtgggggttgtggtattggccccaac
gctgtgtcaaactcccaatccctcccaccaggtattaatggcaatggaaacatgggaaat
ggaagcctgggaggtgcagataatggcgggggaggttggattggcataagtgctaacgaa
aatgatcaacagcacccttcagccaacacaagcttgtccttcaaaatggaaccttctaac
cttaacactgacagaccaaaccacactaagcagcagcaagatcatgagcctatgagccct
atccatgggttaactggctggggaggccagtcacccactgaatcatcccagctcaatggg
gacacaacaggcagctctgtatggggtagtgtagaaaccaaggcagctgactctcccaag
gactcaggctgggactcaactccctcttcaggtctttctgcctggggccgccaaggcagt
ggtggtgggagtagtggaagtggtggctggggtgactgggggaaatcccctggtggcgga
gatgcatctaaaggctgggactcagtagacgctggtagttctggttcaggccaagagcag
caacttagctcatggggccagcagcccagaacagccccagcaagcgacggtagtggggac
agcagcgaaagtaaatctggcgacagagacaggtcctccagcacggattgtacccctctg
ttcccccggcaggacctggaccctagggtgctgagtaacacaggttggggacagaccccc
atccggcagcacactgtatgggagatggaagaagccaattctgatgatgggaagcgcaaa
agcagctcagacaccatcggaggctccagctctaatggtggaccctcatccgtcaatgga
ggtatcatcaacccgaaaatttgccccagtcagaggcctgggtctggagaaaaaattgac
agtgaaggatcatcatcatcctcaggctggagagcccctccacctcagcctatccagact
ggatcaggatggggggaccccccacagtcactcagcaaagcaccaaatggcactaccagt
ggctggggtgaccctttgccttccagtggtcctagaaatggaggcacaccatcctggggt
tctgaggacaagtcacccagttgggatgatggccagaagaaaagtcagcctactagctgg
ggagatggccccaaaagctcccatggatggggcaacagtaatgggggctccaatggctcc
agcacaggggagtggggagaggcagaagtcaagaagaacggatcctccagcagcatgtgg
gaaggagaaggaggaaatggaggaagtggtggatggaaggaaagccccaggggaggaaat
agaggaggaggctgggataagcctgctcctactgtgagtaataccagctggggggagacc
ccacgtgccaatggcccaatacaaggatcatggggctcttccaagccccaggaaagcagc
agcagcagcactggtagcggaggaggtggaagcatgggttcatggggtggtcctggtact
gtgaagcagaacacatcaagctggggcaatggcagcaaacaggaccagggcatggatccc
accggctgggaagagccctcccctccctccatccgcaggaagatggagattgacgatgga
acgtccacctggggcgatcccggcacctacaacaagactgtcaatatgtgggatcgcaaa
aatcccaataataacacaggcaacagcggcccacctcccagtaagaatggtggagggatt
atccccaacaataacaacaatcactctgtcggccctggcaacaacaatcaccatcacact
caccacatgcaccaccatccccatcatggccagcccccaactcacctgcaacaccatgga
aacaacaatgggtcatccaataatggccccccacatccaagtgtggggacccagtgtaga
cctcccctcgccaacccaggttggggagagcttccgagtgttcaacccaagtcagagcct
gcttggggagagccagcagctccaatatcaagtgtggacaatggcacctctgcctggggc
aagccctcagggggagtaggaggatggggagatagtggccatgagccctctggaccctat
ggcagggccaacggacccaccggttctgcaccctgcaagccaggccccaaacctatgcaa
gatggctggggaaatggaggagaggagatgggcatgtctaccggccaatgggacactgag
gatggggacatgtggaacagccccacctcccaggagagcagctcttcttgcaactcctgg
ggcaatggacccaagaagggcccgagcaaggggaagatgggcaagccagatgatgcttgg
atcattaaccgtctgatcaaacagctcactgacatgggctttccgagagaccctgctgag
gaggctttgaagagcaacaacatgaaccttgaccaggccatgagcgctctgttggagaag
aagacggacctggacaagcggggcatgggcatgtctgattacagcaatggcatgaacaag
cccatggtgtgtcggccctctgcactctccaaagacccctctgaacgcacctcctttctt
gataaggatggtgttctgtcagatgatgcccccccatcaccgtttctgccttcccccaac
ctgaagctccccctggccaacagtagcctttctgggcagggtctgggacagggcaacccg
gggctggccatgcaaaacttgaacaacagacagatacccagtggaatgtttggcagtagt
ggagcagcacaaacccgggccatgcagcagcagcctcctcagccaccagtgccacctctc
agctcctcccagcctagtctacgtgctcaagtgcctcagtttctttcccctcaggtccaa
gcacagctcttgcagtttgcagcaaaaaatattggtctgaaccctgcacttttaacctca
ccaataaaccctcaacaaatgaccctcttgtaccaacttcagcaactgcaaatggcatac
cagcgtttacaaatccagcagcagatgatgcaggcgcaacgcaatgtttccggccccatt
agacagcaagagcagcaagttgcacgtacaatcaccaacatgcagcagcagatccagcag
caccagcgtcagctgtaccaagcgctgctgatgaaacagcagcaacttccctcccattcc
tcttcctcctccgctggtctgcatccctccggtggccccgctggagtccatggttccgga
aaatcaaacctggacccctacacaggcccacaccaggctccgggcctagccgacacactg
cacaccaaagagccgccgtcttcgtccaacgcctacagcacctaccctctctctggactg
aatccaaacatgaatgtaaactgcatggaggttgggggtttgtccctaaaggagccccct
cagccccaatcccgcctgtcccagtggacacactccaactccatggacagcctctctggc
aactcctcaaacatggagaacaacctcaataaacacggtgccatatctgctgcctctacc
ctgtgcccccctggtaagcccccccagctagaggactcatacagcccttacaatctaatg
tccagctctgagtcccccaacagccccctggtgccctcggacagctggggacagggcaag
aaccccaatgaaaagatctccaatgggaccaacattaactggcccccagagttctgccca
ggtgtgccatggaagggccttcagaacatcgaccctgagaatgaccccaacatgacccct
ggcagcgtccccagcggtcccaccatcaacaccaacatccatgacgtcaatcgatatctg
ctgcgggacaggaatggagccacttccccagctctgccacttcagaatggctctctgcct
ccaaccagcagtgactggcctatcagtggctactctagctctttcagtctgtcgtcctct
gatggagacggctcaggtaaactgtctgacatgaagtccacctggtccccagggcccatc
tcccagagccaagcctctctttcccatgagctgtggaaagtccctcaggggccgcgcagc
aacgcagccccttcccggcccccgccaggactcaccaacaacaagccctcttccacctgg
ggtggcaactctctgggcctggcccaaggctggagcgcctcctactcctctgagggaacc
acctggagtactgatagctccaacaggaccagcagctggctggtgctgaggaatctcacc
ccacaaattgatggttccactctgcgaaccctgtgcatgcagcacggtcccctgatcaca
ttccacctcaacctgacccaggggaacgctgtggtgcgctacagctccaaggacgaggct
gcaaaggcccagaagtctctgcacatgtgtgtgcttggaaacaccaccatcctggcagag
tttgccggtgaggaggaggtgaaccgcttctttgcacaaggccagtcgctgggggctaac
accactagctggcaggccaacccaggaaccaatcaaaaccggatgggcggggcagcacag
tcccactctattggccagtggagcagcggtggcggtggaggcaagcccagtggaggcgac
ctgctgtggggcggtgtgccccagtactccagcctgtgggggccgccaaacggagaggac
gcccgcgtgatcgggagcccaacttccattaacaccctgctgcctggagatctgctgagt
ggggagtccatgtag
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integrated database retrieval system
