Sander lucioperca (pikeperch): 116042575
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Entry
116042575 CDS
T07345
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116042575 (rfx1b)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Other basic domains
RF-X
116042575 (rfx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Spc42p
HHH_7
Motif
Other DBs
NCBI-GeneID:
116042575
NCBI-ProteinID:
XP_031144667
Ensembl:
ENSSLUG00000013210
LinkDB
All DBs
Position
4:12497720..12511904
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AA seq
834 aa
AA seq
DB search
MATSGYSEDLQPQQANAVTIATPSATTPSSAKTAHFLSEIPPTSGAIASANQSATVSKTG
QDALCSQAPPNSQKAVVLTTPTQHYVTQEIQHSGVQKSNGQSNSPQYIIVTVTEGSVHSN
DSLSDSSPPATAVPTQVVQPVQTTQQRSVLQAVSQAAKRIQINNLQSVDINQEVEHVYSG
QVQYVDGGGDATFTTSSIRSSNYPFSDSPLYSQTPPSSSSYYEATPSSEADITASVTSQP
VSVATAGANSGGAAAGGGGYVIQGGYVLGGAAAGGGGQSYSSPNSRAPPATVQWLCDNYE
GAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYY
GLRIKSGSPLLRLMDEQQHMAMRQQPFSQKNRIKPLQKSQGITNGTSGGMGQQQAAALCD
ISAQVQQYQQFLEASRPLPDFVDIDLQDGTLPDGILLEHLKAFQTLYREHCEAILDVMVN
LQFTLVETLWKSFWRFSQSSDTESLNLHNESEKRLPKSCLVVLCKYEPVLRWTKECDNLL
YQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIKVLCVGSFSQT
LRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVCQCEDRVVQRLEQD
FKMTLQQQNSLEQWATWLDGVVSEALKPYEHSPVVLPKAAKVFLLNWSFYSSMVIRDLTL
RSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTVKSRISPDLEKEEE
EDDEEEESEDEGGDLVLQSSSLRAVDDEKDSMEPPTKLPRTTFNLHSLTDSTPS
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcagaggaccttcagcctcagcaggccaatgcagtaaccata
gcaacaccttctgctaccacaccctcatccgcaaagacggcacacttcctgtccgagatc
ccaccaacctctggagccattgcatcggctaaccaatcagccactgtctcaaaaacagga
caggatgcactttgttctcaagcgccgcccaacagccagaaggcagtggttctgacgact
cccacgcagcactatgtaacccaagaaatccagcactctggggtccagaaaagtaatggt
cagagcaactcgccccagtacatcatagtaactgttacagagggctcagttcactccaat
gacagcctgtcagactctagcccacctgccactgctgttcctactcaggtggtccaacca
gtgcagaccacccaacagaggtcagtgttacaagcggtgtcgcaggcagccaagaggatt
cagatcaacaacctacagtctgtggacattaaccaggaggtggagcatgtgtactctggc
caggtgcagtatgtggacggaggaggagacgcgacttttaccacgtcctccattcgatcg
agcaactaccctttctccgactcgcccctctactcccagacccctccctcctcctcctcc
tactacgaggccacacccagctctgaggcagacatcactgcctctgtgacctcgcagcca
gtttctgtggcaacagcgggagccaatagtgggggagcggctgcgggcggagggggctat
gtcattcaaggaggttatgtgttaggaggagcagcagcaggtggaggaggacagagttac
tccagccctaactctcgtgccccacccgctactgtgcagtggctgtgtgataactacgag
ggggcggagggggtgagtttacctcgctgcaccctctactaccactacctgctgcactgc
caggagcagaaactagaacctgttaatgcagcatccttcggcaaactcatcaggtccgtc
ttcatggggctacgtacacggagattagggaccagagggaactctaagtaccactactat
ggactgaggatcaaatctggttccccgctgctcagactgatggatgaacagcagcacatg
gcgatgaggcagcagcctttctcacagaaaaacaggataaagccacttcagaagtcacag
gggatcaccaatgggacatcaggtgggatgggtcagcagcaggcggcggcactatgtgat
atttcggcgcaggtgcaacagtaccagcagtttctggaggcatcaaggccgctgccagac
tttgtggacattgatctgcaagatggaaccctgcccgatgggatccttttagaacacctc
aaggcctttcagactctctacagagaacactgtgaggccattctggacgtgatggtcaac
cttcagttcactctcgtggagacactttggaaatccttctggcggttcagccagagcagt
gacaccgagtcactcaacctgcacaatgagtctgagaagcgtctgcccaaatcgtgcctg
gtggtgctgtgtaagtatgagccagtgctgcgctggaccaaagagtgcgacaacctgctc
taccagactctggtggagatcctcatccctgatgtactgagacccatccccagtgcctta
actcaggccatccgcaactttgccaagagtctggagaactggttgacaggcgccatgatg
aacatcccagaagagatggttcgcataaaggtgctgtgtgtgggctccttctcccagacg
ctgcgccgctataccagcctgaaccaccttgcccaggcagcccgcgccgtcctccagaac
tccgcccagatcaaccaaatgctctcagacctcaacagggttgattttactaatgttcag
gagcaggcatcctgggtatgtcagtgtgaagaccgtgtggtacagcggctggagcaagac
tttaaaatgaccctgcagcagcaaaactctctggagcagtgggctacctggctggatggt
gttgtctctgaggccctgaagccctacgaacacagccctgttgtgctaccaaaggctgca
aaggttttcctgctcaactggtccttctatagctctatggtaatccgggacctgactttg
cgcagtgctgccagctttggctcctttcacctgatccgcttgctgtatgatgagtatatg
tactacctgatagaacacagggtggcccaggctaaaggagtgacacccattgcggtcatg
ggagaatttgccagcactgtcaagagccgaatctctccggacctggagaaagaagaagaa
gaggatgacgaggaagaggagagcgaggacgaggggggagatctcgtgctgcagtccagc
tctctgagagcggtcgatgacgagaaggactcgatggagccgcccaccaagctgcccagg
accactttcaatctgcactctctgaccgacagcaccccatcttag
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