Sander lucioperca (pikeperch): 116042605
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Entry
116042605 CDS
T07345
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116042605 (tmc6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116042605 (tmc6b)
03037 Cilium and associated proteins [BR:
sluc03037
]
116042605 (tmc6b)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116042605 (tmc6b)
Cilium and associated proteins [BR:
sluc03037
]
Other cilia and associated proteins
Stereociliary proteins
116042605 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
AIM39_C
Motif
Other DBs
NCBI-GeneID:
116042605
NCBI-ProteinID:
XP_035856715
LinkDB
All DBs
Position
4:complement(12832663..12850501)
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AA seq
836 aa
AA seq
DB search
MAQNVNFDLNHPLIEAGLESPVDEEGVHDSFSQLIAEQSQNGGLSDAIELQQLQRQLDEE
DRDNVACLSSPEHDFRERRQMRRDVEWQDNEEQADPLIGERWSSATMKVLSSMPSRTIGR
SRGAIISQYYNRTMQLRRRRQSRPAIRDFSRSARPSIRGYGMEVDSTDAEVSKRDRLVNN
LQNLSVSDRVRMLRGMPLSVAEKSELRSLALQKEKHTLSGSQIPCCSQLKYYIIIGARHS
WYSWLNFLHSLQLWQVALKTVSGRFGTGVLSYFLFLKTLLFFNFFLFLVTGAFMVLPQAV
HPPVLPAGRSSFSGLELLTGAGYFSDTVMYYGYYSNYTLRKSCRDDGGVQNVSLSNGTRL
DCVSKHLSYNMPLAYFFTIGVAFFITCIILVYSMSKSFGQSFRIDKSHSILAMKVLCSWD
FKVIKKTSVKLMSENISTQLKELLAEVNQKHVKNTACQKLWRLMVHGLAWTICIGSTTAC
VLAIYYFSGNMHKKLQQSSRIADNNLLLTEASLLALPVVVSLINLLLPGLFNLAAWMEDY
ESPSVRTYVAICRNLMLKVSVLGLLCYHWLGRVAADPEDIGLKCWESFVGQELYRFLLMD
FIFTLLDTLFGEFLWRLFSEKVLKRRRKPVFDIARNVLELIYGQTLAWLGVLFTPLLPAV
QIIKLFLLFYIKKSSVMMNCQAPRKPYRVSQMTTVFITLLCFPSFLGASVCVTITMWSIT
PSSSCGPFRELKTMFQAGKRWVEELEKDNPNLSVLARAHSYLVENPFFLFVGAGIFLIVI
YFHSQVVDGQRKIISLLQEQIENEGEDKKFLITRLQSIHEKKRTPARRLTSQDFSC
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaatgttaactttgacctgaaccaccctctcatagaagctggactggagagc
ccagtagatgaggaaggggttcatgactcgttcagccagctgatagcagagcagagtcag
aacggaggactctctgacgccatcgagctgcagcaactgcagagacaactggacgaggag
gatcgagacaatgttgcctgcctgtccagccctgaacatgactttagagaaaggaggcag
atgcgaagggacgtggaatggcaggataatgaagaacaggcagaccctctcataggtgaa
cgttggtcctcggcaaccatgaaggtcctgtcctccatgcccagtcgcacaatcggtcgc
agcaggggagccatcatctctcagtactacaacaggaccatgcagcttcggagacgcagg
cagagcagacccgccatccgagacttctctcgctctgccagaccgagcatacgaggctac
ggcatggaggtcgacagtactgacgcagaggtgagtaagagggatcgtttggtgaacaac
ctgcagaacctgtcagtgagtgacagagtcaggatgctcagagggatgcctctcagtgtg
gctgagaaaagtgaactcaggagtttagctttacaaaaggaaaaacacacactttctggc
agtcagatcccatgttgcagtcaactcaaatattacatcatcattggtgcaagacatagt
tggtacagctggctgaacttcctgcactccctccagctgtggcaagtggcgctcaagaca
gtgagcggtcgtttcggcaccggtgtcctctcatacttcctgttccttaagaccctactc
ttcttcaacttcttcctgttcctggtgacgggtgcgttcatggtgctgcctcaggcagtg
caccctccagtgctgcctgcggggcgaagctccttctctggactggagctcctcactgga
gcgggctatttctcagacacagtgatgtactatggctactacagtaactacacactgcgt
aagagctgcagggatgatggcggagtgcagaatgtctctttgtccaatggaaccaggctg
gactgtgtgtcgaagcacctctcttataacatgccgctggcatacttttttaccatagga
gtggctttcttcatcacatgtatcattcttgtgtacagcatgtcaaagtcgtttggtcag
agcttccgcatcgataaatctcacagtattttggccatgaaggtcctctgctcctgggac
tttaaggtcatcaagaaaacttctgtcaaactcatgtctgagaatatcagcacccagctc
aaggagctgctagcagaggtgaatcaaaagcacgtcaagaacacagcgtgccagaagctg
tggagactgatggttcatggcctggcatggactatctgcatagggagcaccacagcctgt
gtgcttgctatttactacttctctgggaacatgcacaagaaactccagcaaagttctcgt
attgccgacaataacctcttgttgactgaggccagcctgctggctctccccgtggtggtg
tccctcatcaacctgctgctgcccggcctgttcaaccttgcagcctggatggaggactat
gagtcgccttctgtacgcacatatgtcgccatttgcagaaacttaatgttgaaagtaagc
gttcttggactcctgtgctaccactggctcggtcgggtggctgctgaccctgaagatatt
ggactgaagtgctgggagagttttgttggccaggagctttatcgtttcctacttatggac
ttcatcttcactctactggacaccttgttcggagaatttctttggaggttgttttctgag
aaggtgctgaagaggaggaggaaaccagtatttgatatcgccaggaacgtccttgaactt
atctatggacagacgttggcctggttgggtgttctcttcactcctctcctgcctgcagtg
cagattatcaaactctttctgctcttctacattaaaaagagcagcgtaatgatgaactgt
caggcccccaggaagccatacagagtcagccagatgaccaccgtcttcatcactctcctc
tgcttcccctccttcctcggtgcctctgtgtgtgtcacaatcaccatgtggagcatcacg
ccctcctcatcgtgcggtccgttccgagagctcaaaacaatgttccaggcggggaaacgg
tgggtggaagaactggaaaaagataatcccaacctgtccgtgctggccagggctcactcc
tacctggtggaaaaccctttcttcctgtttgtgggagcaggcatcttcttgattgtcatc
tacttccacagtcaggtggtggacggtcaaaggaagatcattagcttacttcaggagcag
attgaaaatgagggggaggataagaagtttctgatcactcgcctccagtccatccacgaa
aaaaaacgaacccccgctcgaagactcacaagtcaggacttcagctgttga
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