Sander lucioperca (pikeperch): 116042615
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Entry
116042615 CDS
T07345
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116042615 (tmc5)
03037 Cilium and associated proteins [BR:
sluc03037
]
116042615 (tmc5)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116042615 (tmc5)
Cilium and associated proteins [BR:
sluc03037
]
Other cilia and associated proteins
Stereociliary proteins
116042615 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
ESSS
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
116042615
NCBI-ProteinID:
XP_031144746
LinkDB
All DBs
Position
4:complement(13758397..13773864)
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AA seq
978 aa
AA seq
DB search
MTSYSNGAFFNPAYHDSETLEIDRSSSKTHHTNPYARGDGDRAVAHYSTGPTISDDVAGR
VPWGGWQEESWRGMESIPMGLISTSPESPSWQHDVNHSTFQIPPGSQYDRSTSVRLPSAP
SGNMTMRWRGMTMRRMSMFPNGNPTHIAFTEDAIRNEMENEEQNLVKELVALSTQDRIWA
IRDLPMSVDEKKHIRSQVLAFKTSKQSRQFTCFADCSENVSLSFRRCGYNLRSARQTLEL
WQGIMKEIGGTFGTSVLSYFVFLKWLLMFNIFSFLVNFGFITIPLLVFDPSPNIPPNVSF
RGLEILTGAGYFQYTIMYYGGYSNETLGGPVKYNMQLAYFFTIAIYMVLCGIALIFSMAS
SFKKNYVLADPSSNKAWQLLSSWDFSITNERAVRQRKNNLRVQLKESLSEKAQRRQLTLS
EKLKHFGVYLGFWLLSTGLAVGCGASIYYLCQYEQQWATDAANWSLLQEAKTLLVPFVVS
LMNLVVPLFYSLFNKFEHYSSQRRQIYALVVRNVLLKMSILAVLCYYWMNVVAKKFSCWE
SMVGQALYRLVIFDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLELIYAQTL
AWIGIYFSPLLPAIQIFKLFILFYIKKVSLMKNCQPPRRSGRAAQMQTIFIALLFFPYFV
GSLSMVAYTAWRLTPSEQCGPFRGLNNTFSVVGVWIDDLGGIPGSQWVVWIYQNVIRSEI
FYFLISLIIIAIIYIFWQVTQGRKQLIVLLRQQVVNEGNDKSFLLDKLQNLQKSQPDKKS
KQKTQKKHTKRHLDEHSLGGQSNSNAMVQALLARQQLEEEEERRDTGGVPVPSDISTSSA
LIQAMLARQRAYDQDGDEHLSSASALSQAVQARQRAEGQERDEYYSTGFSENPINTSSAV
AQAMQARQRAEEDGADDLPSSVSSVMMQVMQARQIAEEEDGPPWVPAPTQNPSPAGSSAL
IQAMLARQQAQNEYDDGY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaacggagcattcttcaaccctgcctaccatgacagcgagactctg
gaaattgataggtcttccagcaaaacccaccacactaacccctatgccaggggtgacggt
gacagggcagtcgcacattactcgactggtccgaccatcagtgatgatgttgcaggcaga
gtaccttgggggggctggcaggaggagagctggagggggatggaaagcatccccatgggc
ctcatctcaacgagccccgagagtccttcatggcagcatgacgtcaatcacagtaccttc
caaatcccacctggctctcagtatgatcgatccacttctgtccgccttccttctgcaccg
tcaggtaacatgacaatgagatggaggggaatgacaatgagaaggatgagcatgtttcct
aacggtaatcctacccatatagccttcacagaggacgccatcaggaacgagatggagaat
gaggaacagaacctggtcaaggagcttgttgccctgtcaacacaagaccgaatttgggcc
attcgggaccttccaatgagcgttgacgaaaagaaacatatcaggagccaagtgctggcg
tttaagacttccaagcaatctcgccagttcacatgtttcgcagattgctctgagaatgta
tcactgtctttccgcaggtgcggctacaatttaaggtcagccaggcagaccctggagctg
tggcaaggcatcatgaaagagattggtggcacttttggcaccagtgtcctctcttatttc
gtgttcctcaagtggctacttatgttcaacattttctccttcctggtcaactttggcttc
atcaccatcccgctgcttgtttttgacccctcacccaacatacctcccaatgtgagcttc
agaggactggagatcctgactggagctggttatttccaatacactatcatgtattatggt
ggctacagcaatgaaacactaggggggccggtgaagtacaacatgcagctggcctatttc
ttcaccattgcaatctacatggttctgtgtggaattgcactcatctttagcatggccagc
tcattcaagaagaactatgtactagcagatccatcttcaaacaaagcatggcagcttctg
agcagctgggattttagtattaccaacgagagagcagtgagacagcgcaagaataatcta
cgtgtccaactcaaggagtctttgtcagagaaggcccagaggcggcagctaaccctctct
gaaaagctgaagcactttggggtttatctgggtttctggctcctctccaccggcttggct
gttggctgtggagctagcatctattatctctgccaatacgaacagcagtgggcaacagat
gctgccaactggtctctgctgcaggaggcaaagactcttctggttccctttgtggtgtct
ctgatgaacctggttgtcccactcttctactccctcttcaacaagtttgagcactactcc
agccagcgcagacagatctacgctctggtagtcagaaatgtcttactcaagatgtccatt
ctggctgtcttgtgttattactggatgaatgtggtggcaaagaagttttcgtgttgggag
tccatggtgggacaggctttgtaccgtctggtcatttttgatttcctttttctgatgttg
ggatccttctttggagagtttcttagcaatgtgattgggacacgtctactaccacgtctg
ggggttccagagtttgacgtagccagaaatgtcctcgaactcatctacgcacagactctg
gcttggattggaatctacttctctcctctgctgcctgccatccagatcttcaaattgttc
atcttgttttacataaagaaggtcagcctgatgaagaactgccagcctccgcggcgatca
ggcagagcagctcagatgcaaaccatcttcatcgccctcctcttcttcccctactttgtg
ggatccctgtccatggttgcatacaccgcctggagactgactccctcagagcagtgcggc
ccttttcggggactcaacaacaccttcagtgtggttggagtctggatagatgatctgggg
gggatccctggttctcagtgggtcgtatggatctaccaaaatgttatcagaagtgaaatc
ttctactttcttatctcactcatcatcatagcaatcatatatatcttctggcaagtcact
cagggccgcaagcagcttattgttctactgagacaacaggttgttaatgaagggaatgac
aagtccttcttgttagacaagctccagaacctccagaaatctcagcctgataaaaaatcc
aaacagaagactcaaaaaaagcacaccaaacggcatttagatgaacactccttgggcggt
cagtccaactcaaacgccatggttcaggcgttactcgcccgccagcagctggaagaggag
gaggagagacgcgacactggcggagttcccgttccctccgacatctccacctccagcgct
ctgattcaggccatgttggcccgtcagagagcttacgaccaggatggagatgaacacctg
tcatccgccagcgccctctcacaggcagtgcaagccaggcagagggcagagggtcaagag
agggatgaatactacagcacaggtttttctgaaaaccctatcaacacatccagcgctgtc
gcacaggcgatgcaagccagacaaagagcagaggaggacggagcagatgacctgccatct
tctgtgtcaagtgttatgatgcaagtcatgcaggccagacagatagcagaggaagaggac
gggcctccgtgggtcccagctcccacacaaaacccatctcccgctggctccagcgctctc
atacaggccatgttggcccggcagcaagcccagaatgagtacgatgacggttactga
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