Sander lucioperca (pikeperch): 116042738
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Entry
116042738 CDS
T07345
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116042738
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116042738
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116042738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
YukC
Motif
Other DBs
NCBI-GeneID:
116042738
NCBI-ProteinID:
XP_031144931
Ensembl:
ENSSLUG00000025385
LinkDB
All DBs
Position
4:complement(7777281..7783032)
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLAMKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLNVKNIKHFVLDECDRMLEQLDMRRDVQEIFRVTPHEKQVMMFSATLSKDVRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEDDAKTLNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaccgacgttgacaatgaacttttggactatgaggaggatgaggagccccag
ggagcccccgagagcgggaccccagcaaacaagaaggaagtgaaggggtcctatgtatct
attcacagctcgggcttcagagactttctcctcaaaccagagctgctccgtgccattgtc
gactgtggttttgagcatccctcagaagtccaacatgagtgtattccacaagctatcctt
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtattg
gctacgctgcaacagatagaacctgtggatggtcaggtgtctgtccttgtaatgtgccac
acgcgagagttggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
actgtaaaggtgtctgtgttctttggcggcctggccatgaagaaggacgaggacgtcctg
aagaagaactgccctcacattgtcgtaggaactccaggacgtaccctggccctcatccgc
aacaagaccctcaacgtgaagaacatcaaacactttgtgcttgacgagtgcgataggatg
ctggagcagcttgacatgaggcgtgatgttcaggaaattttcagggtgacaccccatgag
aaacaggttatgatgttcagtgcaacgctaagcaaagacgtccgccctgtctgccgcaag
ttcatgcaggatcccatggaagtgtttgtggatgatgagaccaagctgacactccatggt
ttacagcagtattactgcaagttgaaggacagcgagaagaaccgaaagctcttcgacctg
ctcgatgtcttagagttcaaccaggtggtgatatttgttaagtcagtgcatcgctgtgtg
gctctgtcccagctgctggtggagcagaacttccctgccatcgccatccacaggggcatg
gcgcaggaggagcggttatcacggtaccagcagttcaaagactttcaacggcgaatcctg
gttgccaccaacctgtttggccgaggcatggacattgagcgagtcaacatcgtattcaac
tacgacatgccagaggattctgacacataccttcacagagtggcccgtgctggcaggttt
gggaccaaaggcctggccgtcacctttgtgtctgatgaggatgacgccaagaccctgaac
gacgtccaagaccgctttgaggtcaacgtagcagagctaccagaggagatcgatatctcc
tcctacattgaacagtcaagatga
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