Sander lucioperca (pikeperch): 116042799
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Entry
116042799 CDS
T07345
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116042799 (samd1b)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
116042799 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116042799
NCBI-ProteinID:
XP_031145050
Ensembl:
ENSSLUG00000005865
LinkDB
All DBs
Position
4:complement(11520498..11529230)
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AA seq
654 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGGSSSSSSSAEAARERTKHDHMNNNGDSAHSF
TDQEEGEEDSEPSPDSHTQTPASTTEKKLKPAASPSSGNGCLSCGATTGCAVGSCCKEEK
ASAPTYKGLGPQGVRNCPSPGLCHRTNAHGSGDASKLSPSKADAVCGEKESCLSGDDTQN
KTCSRSASSLPQQQRQKQTELLKPKLQVGGGGTKTAGNNANSDLGDRLVASVRSLSEKSM
RGGTATRGHVKPLGLKEILGYLSSQDRLSEEKLTRGKVKVVMEREVARGRLRRSRCGNIT
LPLRGMVVEKPMPKKASADSLVKSALQDMHTVKKPPSPSLQENEPMETASEEEEPEENEE
EEEEDDPRSSEEGGPTPVAMTTEPELIEKTTEDAEIQTASKQESPQQQHYGKGMCGLDSL
TRTLRPPVQEASLSQCNSTHLEESAVVPDQLYTEAQMQHDRNNHTSSGFNSLESKTEVGV
SSCLLTPTASPKDSGTSEERGMNGDSSGGFLKSEGTSGSPVDWTVSDVVSYFTAAGFPEQ
AAAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQKTHFVDDDC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggattctggaaacaatcgactctctccgctcg
aggaaagcccgtccggatctggagaggatttgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagaactggaaaaactgattcaagagcagacggtgctcaaa
gttagctacaaggggtccatatcgtaccgaaatgcggcgaaggtgcagaggaaaagcaga
aagaagagtgagtttacggccgctggcggcagcagcagcagcagcagcagcgcggaggca
gcgagggagcggaccaaacacgaccatatgaacaacaacggcgacagtgcgcacagcttc
accgaccaggaggagggagaggaggactcggagcccagcccagattcccacactcaaaca
ccagccagcacaaccgagaagaagctcaagcctgccgccagcccgagtagcggaaacggg
tgcctcagttgtggcgcaacaacgggctgcgctgtcgggagctgctgtaaagaggagaaa
gcaagtgcgccgacatacaagggattaggaccgcagggagtgcggaactgcccttcgccc
ggtctctgtcacagaacaaacgcacacggcagcggtgatgccagcaagttatcaccgagc
aaagccgatgcagtttgcggagaaaaagagtcgtgtttgtccggagatgacacccagaac
aaaacttgctctaggagcgccagcagcctcccgcaacaacagagacagaagcagactgag
ctcctcaagcccaaacttcaagtcggaggagggggcaccaaaactgcgggaaacaacgcc
aactccgacctgggcgacagattggtggcttctgttcgcagcctgtccgagaagagcatg
cgagggggcaccgcgaccagaggccacgtgaagccgctcgggctgaaggagattttgggt
tatctgagcagccaggaccggctgtcggaggagaagctgacccgaggcaaagtcaaagtg
gtcatggagagagaggtggcgaggggcaggctgcgcaggagccgctgcgggaacattact
cttcctctgagggggatggtggtggagaagccgatgccgaagaaggcgtccgctgacagt
cttgtaaagagcgcactgcaggacatgcacactgtgaaaaagccgccgtccccctctctc
caggagaatgagcctatggaaacagccagtgaagaagaggaacctgaagagaatgaggaa
gaggaggaggaggatgatccccggagttctgaagaaggaggacctaccccggtagccatg
acaaccgaaccagagctcattgagaaaaccacagaagatgctgagatccagacagcatct
aagcaggagagcccccagcagcagcactatggcaaagggatgtgcgggcttgattccctc
accaggacgctgcgtccacctgttcaggaagcttccctgtcacaatgtaacagcacacac
ttggaggagagcgctgtcgtccctgatcagctatatacggaggcacaaatgcaacatgac
agaaacaaccacacctcctcaggctttaacagcttggagtctaagacagaggttggagtg
tcgtcctgcctgctcacacccactgcctccccgaaggactccggcacatctgaggaacga
gggatgaacggagatagcagtggagggtttctgaagtctgaagggaccagtgggagcccg
gtggactggacagtgtctgatgtggtcagttatttcacagcagcaggtttccccgagcag
gctgctgccttcaggacccaggaaatcgatggcaagtctcttctcctcatgcagcgtaac
gacgttttgactggcctatcgatcagacttggccccgccctcaagatctatgagcgccat
gtaaaggttctgcagaaaacacattttgtggatgatgactgttaa
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