Sander lucioperca (pikeperch): 116042802
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Entry
116042802 CDS
T07345
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00310
Lysine degradation
sluc00514
Other types of O-glycan biosynthesis
sluc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116042802
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116042802
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sluc01003
]
116042802
Enzymes [BR:
sluc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116042802
Glycosyltransferases [BR:
sluc01003
]
O-Glycan biosynthesis
O-linked Gal type
116042802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
116042802
NCBI-ProteinID:
XP_031145058
Ensembl:
ENSSLUG00000010551
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All DBs
Position
4:11310957..11324081
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AA seq
609 aa
AA seq
DB search
MPRVTSLLSALLFVLLPGSSWGYFPEERWSPESPLLAPRVVVALVCRNSAHSLPLFLGAI
ERLNYPKDRIALWVATDHNIDNTTAILRDWLVKVQNDYHYVEWRPEDEPSSFEDEVGPKH
WNNLRYEHVMKLRQAALETAREIWADYLLVADCDNLLTNTDTLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQERLGCFAVPMVHSTYLVDLQKDASRQLAFYP
PHPEYSWTLDDVIVFAYSARMAGVQMYVCNKETYGFFPVPMRSHGTLQDEAESFVHTQLE
VMVKNPPLEPSSFLSLPPKQPNKMGFDEVFMINLVRRSDRRERMLRTLYEQQLSCKVVAA
VDGKALNKTDIESMRIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLQTSLVI
EDDLRFEVFFKRRLQTLLQEVTTHKLDWDLIYIGRKRMQVDHQEKSVPNIHNLVEADYSY
WTLGYMLSLQGAQKLLGAEPLTKLLPVDEFLPVMYNKHPVSEYMDHFESRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNETVKTDWDRAKSRKTQEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcacctcactgctgtctgccctgctgttcgttctcctaccgggctcgagc
tggggatatttccccgaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcgtcgcgctggtctgccgcaactcggcgcactctctgccgctgttcctcggagccatt
gagcgcctcaactacccgaaggaccgcattgcgctgtgggtggcgacagatcacaacata
gataacaccacagccatcctgagagactggcttgtcaaggtgcagaatgactatcactat
gtggagtggagacctgaagatgaacccagttcctttgaagacgaggtggggcctaagcac
tggaataatctccgttatgaacacgtaatgaagctccgccaggcagcgttggagactgcc
cgtgagatctgggccgactacctgctggtggctgactgtgacaacctgctcacaaatacg
gacacgttgtggaaactgatgagtgaaaacaagactattgtagcgccaatgctggagtcc
agagccgcatactctaacttctggtgcgggatgacttcacagggttactacaagcgtaca
ccagcctacatgcctatccgtaagcaggagcgtcttggctgttttgctgtaccgatggtc
cactccacctacctagtggacctacagaaagacgcctcccgtcagctggctttttatcca
ccacaccctgagtacagctggaccctggatgatgtcatcgtctttgcctactcagctcgc
atggcaggtgtgcagatgtacgtgtgcaacaaagagacttatggttttttcccagttcca
atgcgttcccatggcaccctacaggatgaggcggagagcttcgtgcatactcagcttgag
gtcatggtgaaaaatcctccactggagccctccagcttcctgtctcttcctcccaagcag
cctaacaagatgggctttgatgaggtgtttatgataaatctggtgcggagatccgaccgt
cgcgagcgaatgctaagaactctgtatgagcagcagctcagctgtaaggttgttgccgct
gtggatggcaaagctctgaacaagactgacatagagtctatgaggattaagatgctgccg
ggttacaaagacccttatcatggtcggcctctcaccaaaggtgaactgggttgtttcctc
tctcattacaacatctggaaggagatagtagatcgtggtctacagacctccctggtcatc
gaggacgacctccgcttcgaggtgttcttcaagcggcgtctccagacgctgctgcaggag
gtgacaacacacaagctggactgggatctcatttacatcgggcggaagcggatgcaggtg
gaccaccaagagaagtctgtaccaaacatccacaatctggtggaggcagactactcctac
tggacactcggctacatgttgtcattacaaggagcccagaagctcctcggggccgaacct
ctgaccaagttactacctgttgatgagttcctccctgtcatgtacaacaaacatccagtt
tcagagtacatggaccactttgagagtcgggacctgcgcgcgttttctgccgagccgctt
ctggtgtatccgacccattacacaggagaccagggctacatcagtgacacggaaacatcg
gttgtgtgggacaacgagactgtcaaaaccgactgggaccgagccaagtcgaggaaaact
caggagcaaggggagctgagctttgaggcccagaattctgacgtactgcagtctgaactg
gagaactggagcgcacgggacgagctgtga
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