Sander lucioperca (pikeperch): 116042881
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Entry
116042881 CDS
T07345
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X2
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04110
Cell cycle
sluc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116042881 (smc3)
04114 Oocyte meiosis
116042881 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116042881 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116042881 (smc3)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116042881 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
116042881 (smc3)
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
116042881 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
116042881
NCBI-ProteinID:
XP_031145178
Ensembl:
ENSSLUG00000014864
LinkDB
All DBs
Position
4:complement(10608510..10641482)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEREQLSAERQEQIK
QRTKLELKTKDLQDELAGNSEQRKRLLKERTKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQITAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSTNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKETLARSEDLDSLVDKTEGEIKDHIKS
MDRWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccaaactgtggta
gacccgtttagtccaaagcacaatgtcatcgttggaagaaatgggtcaggaaaaagtaac
tttttctatgctatccagtttgtgctcagtgatgagttcagccacctgcgacctgaacag
cgcctggccctgctccatgagggaactggtcctcgtgtcatttcggcttttgtggagatt
atatttgacaactctgacaaccggctgccgattgacaaagaggaagtctcccttcgccgc
gtcattggtgcaaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgctggcttctcccgcagtaacccttactacatcgtcaag
cagggaaagatcaatcaaatggccacagcacccgactcccagcgtctgaagctgctgaga
gaggtggctgggacacgggtgtacgatgagcgcaaagaggagagtatttctctcatgaag
gagacggaggggaagcgagagaagatcaatgagctgttgaagtacattgaggagcggctg
cacaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgaga
agagccctggagtacaccatctacaaccaggagctgaatgaaacccgtgccaaacttgat
gagctgtccagcaagcgagagacctgtggagacaaatccagacagctgcgtgatgctcaa
caagatgccagagacaaagtagaggagacggagcgtgttgtgcgagagctgaagtctaag
atctctgccatgaaggaagagagggagcagctatcggccgagcgccaggagcagatcaag
cagaggaccaagctggagctgaagaccaaggacctgcaggacgagctggcagggaacagc
gaacaaaggaaacgcctgctgaaagagaggacgaagctgctggagaaaatcgaggagaag
cagaaagagctgcaggagactgaacccaaattcaacatggtgaaggaaaaagaggagcgg
ggcatatctagactggcccaggctacacaggagaggacagacctgtatgccaagcagggc
cgtggcagccagttcacctccaaggaagagagggacaagtggattaagaaggagttgaag
tctctggaccaggccatcaatgataaaaagaggcagatcactgccatccacaaagacctg
gaggacaccgagaccaacaaggagaagaaccttgagcagtacagtaaactcgatcaagat
ctaaatgaggtcaagacccgcgttgaggaattggacaaaaagtattatgaagtaaagaac
aggaaagatgagctacagagcgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccctggctgccaaacgagaggaattggagaagaaacagcagctccttcgagcggcc
actggcaaggctattctcaacggcattgacagcatcaacaaagtccttgagcattttcgt
cggaagggcatcaaccagcatgtcatcaatggttaccacggcattgtcatgaataacttt
gagtgtgagcctgccttttacacctgtgtggaggtgactgctggtaccagactgttttat
cacattgtggagactgatgaggtcagcaccaaaatactaatggagttcaacaaaatgaac
ctgcctggagaagtcacattcctgcccctgaccaagcttgatgtcagggacaccgcctac
ccagagaccaatgatgctatccccatgatcagcaagctgcgctacagcaccaactttgac
aaggccttcaagcacgtgtttgggaagaccctgatttgtcgcagcatggaagtttccacc
cagctggccagagctttcaccatggactgtataactctggagggtgaccaggtgagccac
cgtggagccctgacaggaggctactacgataccagaaagtctcgcctggagttgcagaaa
gacatgaggaaggctgaggaggagctgggtgagctggaggccaagctcaatgagaacctg
cgcaggaacattgaacgcattaacaatgagattgaccaactgatgaaccaaatgcagcag
atcgagacacagcagaggaagtttaaggcatccagagacagtattctgtcagagatgaag
atgctgaaggagaagaggcagcagtcagagaagacattcatgcccaagcaacgcagtctc
cagagtctggaggccagcctccatgcgatggagtccaccagggagtcactgaaggccgag
ctcggtacagatctgctctctcagctcagcctggaggaccagaggcgtgtcgatgacctc
aacgatgagatccgtcaactccagcaggacaacagacagttgttgaacgagaggattaag
ctggagggcataatgaccagagtggaaacgtatctcaacgagaacttacgaaagcgtctt
gaccaagtggagcaggagctaaatgagctgcgagagactgagggaggcacagtgctcaca
gccacaacatctgagctggacggcatcaacaaacgtgtcaaagagactttggcacgatca
gaagatctggattctctggttgacaagacagagggggagatcaaggaccacataaagagc
atggaccgctggaagaacattgagaaggagcagaatgatgccatcaaccacgacaccaag
gagctggagaagatgactaacaggcagggcatgctgctcaagaagaaggaggagtgcatg
aagaagatcagagagcttggttcgctacctcaggaggcctttgagaagtaccagaccctc
acactcaaacagttattccgaaaactggagcagtgcaacacagagctgaagaagtacagt
catgtcaacaagaaagctctggatcagtttgtcaacttctctgagcaaaaggaaaagcta
atcaagcgtcaggatgagttggatcgtggctacaaatctatcatggagctcatgaacgtt
ctggagctgcgcaagtatgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaggttttccagaagctggtgccaggtggcaaagctacgttggtgatgaagaagggt
gatgctgaaggcagccagtctcaagatgaaggagaaggtggtgcagacagtgagaggggc
tccggttcacagagcagcgttccttcagtggaccagttcactggagtcggcatcagggtg
tcgttcacagggaagcagggtgagatgagagagatgcagcagctgtctggaggtcagaag
tctcttgtggctctggcactgatatttgccatccaaaagtgtgatcctgctcctttctac
ctgtttgatgagatcgaccaagccctcgacgcccagcacaggaaggctgtctcagacatg
atcgttgagctggccggccacgcccagttcatcaccacgaccttcaggcctgagctgctc
gagtcggcggacaagttctacggtgtcaaattcagaaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaagactttgtggaggatgacaccacccatggttaa
DBGET
integrated database retrieval system
