Sander lucioperca (pikeperch): 116042889
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Entry
116042889 CDS
T07345
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116042889 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
116042889
NCBI-ProteinID:
XP_031145204
Ensembl:
ENSSLUG00000015145
UniProt:
A0A8C9Z3F3
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All DBs
Position
4:complement(10495744..10514791)
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AA seq
582 aa
AA seq
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MSSTLGKEKDPKEKDPKGGPAGKEREKEAKALAGLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLITLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLATCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagacccgaaagaaaaggaccccaaaggtggtcca
gccgggaaagaaagggaaaaggaggccaaggctctagccggcttagtaaaggatggtggc
aaagaaacgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagctca
acaccgggtgttgccttctctgttgacaatacgataaagcggccaaacccggcaccaggt
acgcgcaagaagtccagtaatgccgaggtgatcaaagagctcaacaagtgtcgggaggag
aactcaatgagactggacctatctaaaaggtccattcacatgctgcccacctccattaag
gagttgacgcagctggctgaactttacttatacagcaacaagctgcagagcctgccggcg
gaggtgggttgcctatcaggcctgatcactttggccctgagtgagaactccctgaccagc
ttgcctgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccggctgttgtctaccggctgacatctctgaccacgctgtacctgcgc
ttcaaccgcattacaactgtggagaaggacatccgaaacctatccaagctcactatgctc
agcattcgtgagaacaaaattaaacagctgcccgcagagataggggagctatgcaacctc
ataactctggatgttgcccataaccagttggaacacctaccgaaggagattgggaattgc
acacagataaccaacctcgacttgcagcacaatgagctcttggacctcccagagactata
ggcaacctggcaagcataaatcgtttaggtctacgatacaatagattgtcagccatcccc
agatcattagccacatgtcgagaactggaggagctaaatctcgaaaacaacaacatttcg
gtgttaccagagggcctactgtcaagtttggttaacctgaccagtctaacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgcatcaataagatcccctttggtatcttctccagagccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccattggactttggcaca
tggactagcatggtcgagcttaacctggccaccaatcagctgacaaagatcccagaggat
gtctgtggtttagtctctctggaggtgttaatattgtccaataatcttctcaagaagtta
ccgcatggtattgggaatttgagaaagctacgggaacttgacttagaggaaaacaagttg
gaatctctacctaatgaaattgcgtatcttaaagatttacagaaattggtgttgacaaat
aatcagctgaccacgttacccagaggcatcggccacctcaccaacctgactcatcttggt
ttgggggagaacctgctgcaacaccttccagaggagattggtacactggagaacttggag
gaactgtacctcaatgacaaccccaacctgcacagcctcccattcgagctggccctgtgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccacagatt
gtcgcaggaggcccctccttcatcatccagttcctcaagatgcagggaccataccgtgcc
atggtctga
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