Sander lucioperca (pikeperch): 116042940
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Entry
116042940 CDS
T07345
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116042940
04020 Calcium signaling pathway
116042940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116042940
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116042940
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
Motif
Other DBs
NCBI-GeneID:
116042940
NCBI-ProteinID:
XP_035856803
LinkDB
All DBs
Position
4:17627849..17912493
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AA seq
2322 aa
AA seq
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MTSEEEEGPSVATTPSAATISRAATAIARGDSVDVVTSSSPRRPSPQRLPCPEKKEKKEE
EIEEEGIIHEERIEKEERGVVVCQRDDDEEDHDEDDSSDTSVLVVPYPELAPVVFFCLKQ
TTCPRSWCIRMVSSPWFERVSMMVILLNCVTLGMYQPCENVDCSSDRCQILQAFDAFIYI
FFAMEMVIKMMALGIFGRRCYLGDTWNRLDFFIVMAGMIEYSLDLQNVNFTAIRTVRVLR
PLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEDN
FTLATGISLPRPYYMADEDDERPFICSLPVDNGIMSCGDVPARREGGRTCCLDKDDALYR
QSLGLSPEPLANGSVSVAGLCVNWNRYYTRCHTGYSNPHKGAINFDNIAFAWIVIFQVIT
LEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQ
RARCSSSSTLASEPGDCYEALFQLICHILRKARRQTVALFNTLRGKPRGFRGVGRGRGGG
EGRERKANGRGGRERRAVMRRGPPCPHHNKPEHASAMALSAASATDGCPQCAAALSLADG
VGPACSAVNDEAEEGAVEETDGEGVHSGTEEKGKEGQEGAGRHGGCTPKSCKELWHDIRM
KLWGIVESKYFNRGIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTSMFSLEMILKL
TAFGSFNYLRNPYNVFDGVIVIISVCEIAGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQ
LVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDTGDTVPDRKNFDSLLWAI
VTVFQILTQEDWNAVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDA
NRSYSDDDHSSFDESEKHDSIKLSEPRICTLTPNGHLELGALSGPRGSYSSERRSFTIES
GKSSVISLGKSSLERRSLSLRHARSSNYHNWGRPLLPQSAWNRRSSSNSLGRRSYGFGGA
PLVGGSLRVHSTRSPYSYTYAAEQESLLSHPPHSHHNLPPHHPPPPPLFLSRHFAARRDR
RALSLELPELLRAGGPPPGLPPVQPDPGRRSGSGAGGSITGGSGAGSGFGVDHRDCNGKA
PGPHTQLMSEVFPQVNARKDRTDLDEETDYNFCFRIQKMMEVYKPDWCESREEWSVYLFS
PQNKFRVLCQSIIAHKLFDYVVLAFIFLNCITVALERPKIMQGSLERLFLTVSNYIFTAI
FVAEMTVKVVSMGLYLGEKAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRL
LRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCV
GFNVKNITNKSDCLAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGID
QQPSINNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRR
MEKKRRKAQKLPYYASYGRIRLAIHNLCTSHYLDLAITFIICINVITMSLEHYSQPQSLE
TTLKYCNYFFTSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAS
LPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAAL
GVELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGFP
ATDYGCHAGLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAELEL
ELAQGGLCCMMGGIGTIAGATGAAATGAAATGAAASGSGVDGGAFGVITAGTVSGPSVGV
MVPLRDGGGGGGGGGGGGGGGAGHEGHTHHRCRLYSPAQESQWLDSVSLLIKDSLEGDMI
DNLSGSVFHHYCSPPVCKDCKGHPQEIQLAEVEQASLMSDKSSSPALPDDLSLDEHSSYQ
LMVRDTKRGSSDSRSSEELPTQGGYRGLRPPSSGSECGVQELFELNSLSLEQPSPAHCTD
GDRGSCSGGGDGSSPVFHLPVDFFHPAAAAHPGSPGNGVSPEDRGPSRLPTPASWASLRS
PGANSRPLSFQHPSHSDSSLATGSSEGSLQTTVEEGLSFSVSPSRDLELPSYPSHPRAKA
TGDQGRPSLKRRSTTFTLQATRGHQRSQSSSCGGGSTSPGCPRQDSMDPSDEDVGTGTVG
DGCRQTLSSEPLSETLNSVSLTSLLTPGSLAPPPVKKCNSTGSLDQTNLSARSKDSRHLC
SIDAHGYLPNPWTEGRASGGEEDGDITGFSSRPTDTSSRKNR
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggaggaggagggccccagcgttgcaacaacaccgtcagcggcaacaatt
tccagggcagcaacagccatagccaggggcgatagcgtcgatgtcgtcacttcctcctcg
ccccgcaggccctccccgcaacgcctcccatgtcccgagaaaaaggagaagaaagaggag
gaaatagaggaggaagggattattcacgaagagaggattgagaaggaggagcggggggtg
gtggtgtgtcagcgggatgatgatgaagaagatcatgatgaggatgacagcagtgatacc
agcgtgttggttgtgccctaccctgagctggctcctgtggtcttcttctgcctcaagcag
acaacgtgtcctcggagctggtgcatccgcatggtctccagcccgtggttcgaacgtgtg
agtatgatggtgatcttgttgaactgcgtcaccctgggaatgtaccagccctgcgagaac
gtcgactgctcttcagaccgatgccaaatactacaggcttttgatgcattcatctacatc
ttcttcgcaatggagatggttataaagatgatggccctgggaatctttggtcgacgctgt
tacctcggggacacttggaaccgactggatttctttatcgtcatggcagggatgattgaa
tactcgctggacctgcagaacgtcaacttcaccgccatcagaacagtgagggtactgcgg
cctctcaaagcaattaacagggtgccaagcatgcgcatcctcgtgaacctgctgctggac
actctgcccatgctgggcaacgtcctcctcctctgcttcttcgtcttcttcatcttcgga
atcatcggcgtgcagctgtgggcggggctgctgaggaaccgctgctacccggaggacaac
ttcacactcgctacgggtatcagtcttcctcggccctactacatggctgacgaagatgat
gagcgacccttcatctgctccctgccagtcgacaacggcatcatgtcctgcggcgacgtg
ccggcccgccgcgagggaggcaggacgtgctgcctggacaaagacgacgcgctgtaccgc
cagtcactgggcctgagccccgagcctctggccaatggcagcgtcagtgtagcagggctc
tgtgtcaactggaaccggtactacaccaggtgtcataccgggtacagcaacccccacaaa
ggagccatcaactttgacaacattgcctttgcctggattgtaatcttccaggtgatcact
ctggaaggctgggtggagatcatgtactatgtgatggatgctcattccttctacaacttc
atctacttcattctgctgattattattggttccttcttcatgatcaacctgtgcctcgtg
gtcatcgccacccagttctcggagaccaagcagagggagcaccagctgatgcaggagcag
cgagcgcggtgctcgtcctcctccaccctggccagtgaaccgggggactgctacgaggca
ctctttcagctgatctgccacatcctccgcaaggccaggagacaaacggtcgcccttttc
aacaccctgcgggggaaacctcgcggctttcggggcgtcggaagaggtagaggaggagga
gagggaagggagaggaaggccaatgggaggggaggacgtgagaggagagcagtgatgagg
cgcggtccaccctgtccccaccataataagcctgagcacgcctcagccatggccctcagc
gccgcctcggccaccgacggctgccctcagtgtgccgcagccctgtcactcgctgacggc
gtgggaccagcatgcagtgcagtaaacgatgaagcggaggagggagctgtggaggaaacg
gacggggaaggggtacactctggtactgaggagaagggcaaggaaggccaggagggtgca
gggagacatgggggttgtactcctaagagctgtaaggagctgtggcacgatattaggatg
aagctgtggggaatcgtggagagcaagtacttcaaccgaggcatcatgatcgccatcctg
atcaacaccatcagcatgggcatcgagcaccacgagcagccagaagagctcacaaatgtt
ctggagatctgcaacatcgtcttcaccagcatgttctccctggagatgatcctcaaactc
actgcatttggctcctttaactacctgagaaacccctacaacgtctttgatggagtcatc
gtcatcataagtgtgtgtgagattgccggccagtccgacggcggtttgtctgtgctgagg
actttcagactgctcagggtgctgaagctggtaaggttcatgccagctttgaggagacag
ctggtggtcctcatgaagaccatggacaatgtggccaccttctgcatgctgctcatgctc
ttcatcttcatctttagtatcctgggaatgcacatttttggctgcaagttcagtctcaag
accgacaccggtgacacagtaccagacaggaagaactttgactctctgctctgggccatt
gtcactgtttttcagattctgacccaggaggactggaacgcagttttgtacaacggtatg
gcagccacttcaccacttgctgctctttacttcgtggccctcatgacttttggaaattat
gtcctcttcaacctgctggtagccatcttggttgaaggctttcaggcagagggtgatgcc
aatcgctcttattcggatgacgaccactcctcctttgacgagagcgagaagcacgactcc
ataaagttgtctgaaccaaggatctgcacactgacacccaacggccacctggagctgggg
gccctttcggggcccaggggatcctactcctcagagaggcggagcttcaccattgagtct
ggaaagagcagtgtgataagcctgggaaagagcagcctggagagacgctccctttctctg
cgtcatgctcgcagttccaactaccacaactgggggcgccctttgcttccgcagtcggca
tggaaccgcaggtctagctcaaacagtctgggccggaggagctacgggttcggtggggct
cctctggtaggaggcagcctccgtgtacacagcacccgctcgccctactcctacacttat
gctgccgagcaggagtcccttctctcccacccaccccactcccatcataatctaccccct
catcatccacctccacccccactgtttctgtccagacattttgctgcgaggagggatcga
cgggctctttccctggagctcccggagctgcttcgggcaggcggaccgcccccgggcctg
ccccctgttcagccagaccccgggaggaggagtgggtctggggcagggggatccatcact
ggggggtctggcgctggtagtggtttcggagtggaccaccgggattgtaatggcaaggca
ccgggtccccacactcagctaatgtctgaggttttccctcaagtcaatgcacgcaaggac
agaacagacctcgatgaagagacagattataatttttgtttccgtatccagaagatgatg
gaggtgtacaagccagactggtgtgaatctagagaggagtggtccgtctacttgttctcc
cctcagaacaagttcagggtgctctgccagtccattatcgcccataagctctttgactat
gttgtcctggccttcatctttctcaactgcatcacagtggctctggagaggccgaagata
atgcaaggcagcctggaaaggctgtttctcactgtttccaactacatctttactgccatc
tttgttgcggagatgactgtcaaggtggtgtccatgggtctgtacctgggggagaaagcc
tatctgaggagcagctggaacattctcgatggtttcctggtatttgtgtctctgattgac
attgttgtgtcgatggctggtggggctaagatcctgggggttctccgtgttctccggttg
ctcaggacgctacgccccctcagggtgatcagcagagctcccggactgaagctggtagtc
gagaccctcatcacgtccctcaagcctatcggcaacattgtcctcatctgctgcgccttc
ttcatcatctttggtattcttggtgttcagctcttcaaagggaagttcttctactgcgtg
ggtttcaatgtgaagaacatcactaacaaatccgactgtctggctgccaactatcgatgg
gttcaccacaaatacaactttgacaaccttggacaggctctaatgtccctgtttgtgctg
gcctctaaagacggctgggtcaacatcatgtaccatggactggatgcagtggggatagac
cagcagccgtcgatcaacaacaatccgtggatgctgctctacttcatctccttcctcttg
atcgtcagtttcttcgtcctcaacatgtttgtgggcgttgtggtggagaacttccacaag
tgtcgccagcaccaggaggtggaggaggccaagcggcgggaggagaaacgccagcgtcgc
atggagaagaagaggagaaaggcccagaagctaccctactatgcgtcatacggcagaatc
cggctagctatccacaatctgtgtaccagccactacctggacctggctatcacctttatt
atctgtatcaatgtcatcaccatgtctctggagcactacagccaaccacagtctctggag
actacactgaagtactgcaactacttcttcacctccacgtttgtgattgaggcctctctg
aagttagtggcctttggctttcgacgcttcttcaaggacaggtggaaccagttggacctg
gccattgtgctgctgtcagtaatgggcatcaccttggaggagattgagatcaacgcctcc
cttcccatcaaccccactatcatcaggattatgagggtactcaggatagcacgagtgttg
aagttgttgaaaatggcaactgggatgagagctctgctagacacagtggtccaggctctg
cctcaggtagggaaccttggtctgctcttcatgttgctgtttttcatctacgcagccctg
ggagtggagctgtttggagagctggtgtgtaacgctgactacccctgcgaaggaatgagc
cgacacgccacctttgaaaacttcggaatggccttcctcacgctcttccaggtttccacg
ggtgacaactggaacggcatcatgaaggacacactgagggagtgcccgccgggttttccg
gccaccgactacggctgccacgccggactacagttcatctccccaatgtatttcgtgtcc
ttcgtgctcacggctcagtttgtcctgatcaacgtggtggtggccgtgctcatgaagcat
ctggacgactcaaataaggaggcgcaggaggatgccgagatggacgccgagctggagctg
gagctggctcaaggaggcctctgctgcatgatggggggcatcggcaccatcgccggggcc
accggggccgctgccaccggggccgctgccaccggtgccgctgctagcgggtcgggcgtg
gacggaggagcttttggtgtaatcacagcggggacagtcagcggtcccagtgtcggggtg
atggtgccactacgagacgggggaggaggaggaggaggaggaggaggaggaggcggcggc
ggtgcgggtcatgagggacacacacaccatcgatgtcgtctctactctcctgctcaggag
agccagtggctggacagtgtgtctctgctgattaaggactcattagaaggggacatgatt
gacaacctctccggttcagttttccaccactactgctctcctcctgtctgcaaggactgt
aagggccacccacaagagatccaactggcagaggtggagcaggcatctctgatgtcagac
aagtcatcgtctccggcgctgcctgatgacctcagcctggacgaacacagcagctaccag
ctgatggtcagagacaccaagaggggcagcagtgactcccgtagttcggaggagttgccc
acccaggggggctacaggggactccgtccccctagctcaggaagcgagtgtggggtccag
gagttgtttgagttgaatagtctgtcgctggagcagccaagcccggcacattgcacagac
ggagatagaggaagttgcagtggaggtggcgacggttcctcacccgtcttccaccttccg
gtagatttcttccacccagctgctgcggctcacccgggcagtcctgggaacggtgttagc
ccagaagacagagggccgtccaggttgccaaccccagcctcctgggcctctctccgctca
cccggagccaacagcaggcccttgagctttcagcacccgtcccacagtgactcctccctg
gccacaggcagttcagagggcagcctgcagaccactgtagaggaagggctcagcttcagt
gtgtccccatctcgagatctggaactccccagctacccctcacacccgcgggcaaaggcc
acaggagaccaggggcggccttcactaaagagacgcagtactacttttacccttcaagcc
accagggggcatcagagaagccagagcagcagctgcggcggcggcagcaccagccccggc
tgcccccggcaggactccatggacccttcggatgaggacgtgggcacggggacggttggg
gacggctgccgccagaccctgagcagcgagcccttgtcagaaacattaaacagcgtctcg
ctgacgtcgctgctcaccccaggctctctggcgcccccgccggtgaagaaatgtaacagc
acaggctccctggaccaaaccaatttatctgcccggagtaaagacagccgccacctctgc
agcattgatgcccatggttacttgcccaacccctggacggagggaagggcgagtggcggg
gaggaggacggtgatatcacaggcttcagcagccggcccacagacacaagctccaggaaa
aatagatga
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integrated database retrieval system
