Sander lucioperca (pikeperch): 116042988
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Entry
116042988 CDS
T07345
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
sluc03440
Homologous recombination
sluc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116042988 (rpa2)
03420 Nucleotide excision repair
116042988 (rpa2)
03430 Mismatch repair
116042988 (rpa2)
03440 Homologous recombination
116042988 (rpa2)
03460 Fanconi anemia pathway
116042988 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116042988 (rpa2)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116042988 (rpa2)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116042988 (rpa2)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116042988 (rpa2)
MMR (mismatch excision repair)
116042988 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
116042988 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
HTH_11
TAD2
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
116042988
NCBI-ProteinID:
XP_031145336
Ensembl:
ENSSLUG00000021519
LinkDB
All DBs
Position
10:complement(4065019..4072838)
Genome browser
AA seq
292 aa
AA seq
DB search
MLNSLRKANKKKKRQGMRGGHSESMGGGYTQSPGGFASPALSQGGEKKGRTRATQIIPCT
VSQMMSASQADEAFKVGDVEVSQVTILGIIRSTDKSMTNIQYKIDDMTGAPMDVKQWVDT
EDPGVDSTVLPPGTYVKVSGNLRSFQNHRSIVAFSVRPVEDMNEITSHMLEVVQAHMALG
KSQTMTGAGGRMSSDVMPMSRPGNLGNTGSMGGGYAGATDMTNNGLSTNQNQVLSLIRGC
PDPQGISIQDLKQRLNVMSLAVIKQAVEFLSNEGHIFSTIDEDHYKSTDNDD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttgaactctttgaggaaagcaaacaaaaaaaaaaaacgtcaaggtatgagaggaggg
cacagtgagagtatgggcggaggttacactcagtctccaggaggctttgcatcacctgcc
ctatcccagggaggagagaagaaagggagaacccgtgccacacagataatcccctgcaca
gtgtctcagatgatgtctgcttcccaggctgatgaagccttcaaagtaggagatgtggaa
gtttcccaggttaccattttgggtattatcaggagcacagacaaatccatgacgaacatc
cagtataagatcgacgacatgacgggtgctcccatggatgtgaagcagtgggtagacaca
gaggatcccggtgtagacagcaccgtcctgcctccgggcacgtatgtcaaagtctctggc
aatctgcgctcctttcagaaccaccgatctatcgtggcattcagtgtcaggcccgttgag
gacatgaatgagatcacctcgcatatgctggaggttgtccaagcgcacatggcactcggc
aaatctcagaccatgacgggtgccggaggaagaatgagcagtgacgtcatgcccatgtcg
cgaccgggcaacctgggaaacacgggaagcatgggagggggctatgcaggtgctaccgac
atgactaacaatgggttaagcacaaaccagaatcaggttctgagtttgataagaggctgc
ccagacccgcagggcatcagcattcaggacctaaagcagagactcaatgtcatgagtctg
gctgtcataaagcaagcagtggaattcctaagcaacgaaggtcacatcttttccaccatc
gatgaagatcactacaaatcaacagacaatgatgattag
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integrated database retrieval system
