Sander lucioperca (pikeperch): 116043123
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Entry
116043123 CDS
T07345
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116043123
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116043123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
116043123
NCBI-ProteinID:
XP_031145470
Ensembl:
ENSSLUG00000023191
LinkDB
All DBs
Position
10:complement(4195813..4202733)
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AA seq
630 aa
AA seq
DB search
MDQALPSQSSASDLLEPHSEELQLRVDSFRKLGYSSAEVKAALRKLGLSTDTNSVLGELV
RSRTVAAPYVSSSDSDERSTGQKDPLLPPSWTLGPCRIMPQLRDQKNTNTELRPIVIDGS
NVSMSHGNKEVFSCQGIQLAVNFFLDRGHNTITVFVPTWRKEQPRPDAPITDQHILIELE
KRKIVVFTPSRRVGGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERPEWKKCIEER
LLMFSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPTEQKRQLCPYDKKCTYGLKCKFYHP
ERSNQSYLSLADELREKAQISTVKEERNARLSPRQFQSDPGPSHNAFSYPQDSNTEHIRD
QQNSSYHSQVCENTLLYWEDPQKSPNQMPCPLTGGQCQKEPGLHSMPSHYYANISHEYLD
SGLGSYESQFSDFSHYLSNSHRLRPQQQGALPGPRLAPVHLEEKNTSQSCRCCSHVVPST
AHLQHNGNPDSKGQPKYDTYPPHMFPPGVPHQNSLPSHLHYSGAPHHQQKYWSDPFQGLP
QARTSCNVPSLVHSSHSHNCSYKGHQYHSWGQQQSSSAAFDPRRLELRKKLQAIFNPHQV
DTVMEMFPHVMNAEKLAAEILNLKAQRGIF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggcacttcccagccagagctcagcgtcggacctgctcgaaccacacagcgag
gagctccagctcagagtggactccttcaggaaactgggttactcctcagcagaggtgaag
gctgctctgaggaagctgggcctaagcacagacaccaactcggtgctgggagagctggtt
cgcagcaggaccgtcgctgcaccctacgtgtccagttctgacagtgatgagaggagcaca
ggccaaaaggacccgctgctgcctcccagttggactcttggaccctgcagaatcatgcca
caactcagggatcagaagaatacaaacacagaattgaggcctattgttattgacggcagc
aatgtttccatgagtcatggcaacaaggaagtgttctcatgtcaaggcatccagcttgca
gtgaatttcttcttggacagagggcataataccattactgtgtttgtacccacttggcgc
aaagagcagcccagacctgatgcccctataacagatcaacacatcttgatagagcttgaa
aaacggaaaatagtggtcttcactccatcgcgccgtgttggtggtaagcgagtggtttgc
tatgatgaccgctttatcgtcaagttggcgtatgagtcggatggagtgattgtatccaat
gacacctaccgtgacctccaaggagaaagacctgagtggaagaaatgcatcgaggagagg
ctcctcatgttctcctttgtaaatgacaagttcatgcccccagatgaccctctgggtcgc
catggtcccagtcttgacaacttccttcggaaaaaacctctgcctacggagcaaaagaga
cagctctgtccatatgacaaaaagtgcacttacggtctcaaatgtaagttctaccatcct
gagcggtcaaaccagtcctacctgtccttggctgatgaattgagagagaaagcccagatt
tctactgtaaaagaagagagaaatgccagattatcaccgagacagtttcagtctgatcct
gggccttctcataatgccttttcctatcctcaagactctaacacagagcacattagagac
cagcaaaattcttcatatcacagtcaggtttgtgaaaatacactgctgtactgggaggat
cctcaaaaaagtccaaatcaaatgccctgtcctttaacagggggccagtgtcagaaagag
cctgggctgcactccatgcccagtcattactatgccaacatctctcacgagtacctggat
tctggccttggctcttatgagagtcagttctctgacttttcgcattacctcagcaactcc
cacaggctcaggccccagcagcaaggtgccctccctggacccagacttgccccagtgcat
ttagaggaaaaaaacaccagccagtcctgcaggtgctgttcccatgtagtgccctcaaca
gctcacctgcagcataatggaaacccggactccaagggtcaacccaaatatgacacctac
cctcctcacatgttcccacctggtgtgccacaccaaaacagcctccccagccatctccat
tacagtggagcgccacatcatcagcaaaaatactggtcagatccctttcaggggctgccc
caagccaggacatcatgtaatgtcccctctttggtccattcctcacactcccacaactgc
tcttacaaaggccatcagtaccactcctggggccaacaacagtcatcctctgctgcgttt
gacccacgaaggttggaactccgcaagaaactgcaagccatctttaaccctcatcaggtg
gatacagtgatggaaatgtttccacatgtgatgaatgcagagaaactggctgcagagatc
ctcaacctaaaggctcagagaggtatattctga
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