Sander lucioperca (pikeperch): 116043401
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Entry
116043401 CDS
T07345
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116043401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116043401
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116043401
REST complex
116043401
Heterochromatin formation proteins
Other heterochromatin formation proteins
116043401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
116043401
NCBI-ProteinID:
XP_031145894
Ensembl:
ENSSLUG00000016710
LinkDB
All DBs
Position
3:41225861..41247723
Genome browser
AA seq
1301 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQTRRPPVQGIADSFQHRALTPASAVIEAAADNMQPSTGIQYSL
PQGYQVPTMPQNTSGHGHGHNNTAPHVGPHAHSLAVQSQGPALVQGHVHPPAPMTSTQGQ
QFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHP
DLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPISGASSQPASHNQH
PSLPQAGPHTTPTTTTTITPPTPTPTQPAPKQTSKPIQSPAHTPTSQPNPSIPSYASPRS
PSVQSHAPVSSTPSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQK
EQRNAKEAGSNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSMLLCKATPDRA
ESVRNDHGGTVKRPLLNSKQRLSQNGMPIRRPAGVGATPPVKKKPKILGKEHGMTEVSKH
STSTETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWF
KNFLGYRESSHGESSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGR
TPLCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLATIRAL
EAVQRRLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKKNPAVSVP
IVLKRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEI
EMLYDDHQDRASEETATPPPSGPHITQCYEDSQIMEDAAALIIHHVKRQVGIQKEDKYKI
KQIIHHFIPDLLFARRGELSDVEEEEEEEEEEEDMEMDPGGPKKHNGLPGSSPSKSKLLF
GNTAAQKLRGTDDAYNMFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDAREREWER
EVLGLKREKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPIQYEDSLREMFT
IHAYIAFTMDKLIQSIVRQLQHLVTDDVCTRVTDMYLSESANKATGGLLSTQTSRATAEG
TYQRKAEQLMSDENCFKLMFVKSRGSVSLAMELLDTEEENSDEPAEAERWSDYVGRYLNS
DSASPELREHLSQKPVFLPRNLRRIRKCQRGWEQLQQERMNKVPSDKSQDGTSELKMECM
FKLNSYKMVYVCKSEDYMYRHTALTRAHQSQERVNTRLHRRFHAWLDTWAKEHVTSDMAA
DNRKWLMGERREGLLPCTTSCDPEVLHYINVNKYRVKYRTL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatatttgcgccccagcaacagcaaacacgt
cgtcccccagttcaaggcattgcagacagcttccagcaccgggccctcaccccggcctct
gctgtgatagaggcagctgcagacaacatgcagccatccacaggcatccagtattctctc
ccccaaggctaccaggtgcctacaatgcctcagaacacaagtggacacggacatggacat
aacaatactgcacctcatgttggtccccacgcacacagcctggcagttcagtcccagggc
cctgcattggtccaaggtcacgttcatccacctgcacccatgacttcaacccaaggacag
cagtttcagcgactgaaggttgaagatgccttatcctatctggatcaagtgaagctgcag
tttggaaaccagccacaagtttataatgatttccttgatattatgaaagagttcaagtca
cagagcatagacactcctggagtcattaaccgtgtgtcccagctcttcaagggccaccct
gacctcattatgggttttaacacgttcttgccacctggatataaaattgaggttcaaacc
aacgatctagtcaatgtgaccacgccaggtcagatccactacatcacccctcatggcatt
tctgttcagaacatccctataagtggagcatccagccaacctgcaagccacaaccagcac
ccgagtctgccacaggcgggtccacacactacccccaccaccaccaccaccattaccccg
cccacccccacccccacccaacctgctccaaaacaaaccagcaagccaattcagtctcca
gcccacacacccaccagccagcccaacccatccatcccatcctacgcctcgccgcgctca
ccttcggttcagtcccacgctcctgtaagcagcacgccgtccagtgggccacctctccag
aacaaccagcctgtggagttcaaccacgccataaattatgtcaacaagatcaagaaccgc
ttccagggtcagccagacatctacaaagccttcctggaaatccttcacacataccagaag
gaacaacgaaatgctaaagaggcaggaagcaactacaccccagcactgactgagcaggag
gtctacactcaggtggcaagactcttcaagaaccaggaagacctgctctcagagtttgga
cagttcctgccagatgcaaacagctcaatgctgctgtgcaaggctacaccagacagggca
gagtcggtgcgtaatgatcatggcggcacagtaaagagacccttactgaacagcaaacag
agactgagccagaatggcatgccaatcaggagacctgctggagtgggagccacaccgcct
gtcaagaagaagcccaaaatattggggaaggagcatggcatgactgaagtcagcaaacac
agcaccagcaccgaaactatgttctttgagaaggttaagaaggctcttcggagctctgag
gcgtacgacaacttcctgcgttgccttcacattttcaatcaggaagtgatctctcgtgct
gagctggtccagttagtcatcccatttcttggaaaattcccggagctttttacatggttt
aaaaacttcctgggctaccgagagtctagtcacggggagtcgagccatgcagagagttta
cccaaggagcgtgcaacagagggcatcgccatggagattgactatgcttcctgtaagagg
ctggggtccagctatagagcactgccgaaaagctaccagcagcccaagtgcacaggaagg
acgccgctgtgcagagaggttctgaatgacacgtgggtgtcgtttccatcgtggtctgag
gattctacctttgtgagctccaagaagactcaatatgaggagcacatttacagatgtgaa
gatgagcgctttgagctggatgtcgtgttggaagccaaccttgccacgatacgagccctg
gaggcagtgcagcggaggctctctcgtatgtcagctgaggagcagctgcgcttcaagctg
gacaacacaatgggcggctcctcagaggtcattcaccgcaaagctatccaaaggatatat
ggagacaaggcccacgacatcatcgacgggctcaagaagaacccagccgtgtctgttccc
atagtgctgaaaagattaaaaatgaaggaagaggagtggagagaagcccagagaggcttc
aacaaaatctggcgggagcaaaacgaaaagtattacctgaagtcactggaccatcaaggc
atcaacttcaagcagaatgacaccaaagtgttgcgttcaaagaccttactcaacgaaatt
gagatgctatatgatgaccaccaggatcgtgcgtctgaggaaactgccacaccgccaccg
agcggcccacacatcacccagtgctacgaggacagccaaatcatggaggacgctgccgcc
ctcatcatccaccacgtcaaaagacaggtgggcatccagaaagaagacaagtacaagatc
aagcagatcatccaccacttcatccctgacctgctgttcgcacggcgaggtgagctctct
gatgttgaggaggaggaggaagaggaggaagaagaagaagacatggaaatggatccaggt
ggccccaagaagcacaatggcctgccaggcagcagcccatcaaagtccaagctcctcttc
ggcaacacggcagctcagaagctgcgaggcaccgatgatgcctataacatgttctttgtg
aacaactactggtatatcttccttcgtcttcaccacatcctctgttctcgtttgctgcgg
atctacgggcaagccgagaagcagattgaggaggacgcccgtgagcgagagtgggaaaga
gaagtgttggggctgaaaagggagaaaaatgaaaatccagcgatccaactgaagatgaag
gagccaatggatgtcgatgtagaggattattactcagtgtttctggaaatggtgcgcaac
cttttggatggaaacatggagccgattcaatacgaggactcactgagggaaatgtttact
atccatgcctacattgccttcaccatggacaaactcatccagagcatcgtccggcagctc
cagcaccttgtcactgatgatgtatgcacgcgtgtgacggacatgtacctgagcgaaagt
gccaataaagccacggggggcctgctgtccacgcagacatccagggccacagcagagggg
acctaccagcgcaaagcggagcagcttatgtcggatgagaactgcttcaagttgatgttc
gtaaagagccgaggatctgtcagtctggccatggagctgctggacacagaagaggagaac
tctgatgagccagcggaggcagagaggtggtcagactacgtgggtagatacctgaattca
gattctgcatccccagagctgcgtgagcatctgtcccagaagccggtgttcctccccagg
aatttgagacggataaggaagtgccagagaggatgggagcaactgcagcaggagagaatg
aacaaggtcccctcggacaagtcgcaggacggcactagtgagctaaagatggagtgcatg
ttcaagctcaactcctacaagatggtctacgtctgcaagtcagaagactatatgtacagg
cacacagcactcacacgagctcatcagtcccaagagcgagtcaacacacgcctgcacaga
cgctttcatgcctggctggacacatgggccaaagagcacgtgaccagcgacatggctgcc
gacaaccgcaagtggctgatgggagaaagacgagaaggcctattgccctgcaccaccagt
tgcgaccctgaggtcctccattatatcaacgttaacaagtaccgggtgaagtacagaaca
ctgtag
DBGET
integrated database retrieval system
