Sander lucioperca (pikeperch): 116043459
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Entry
116043459 CDS
T07345
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116043459 (lingo1b)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116043459 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_9
ig
Ig_2
LRR_Zer-1
LRR_RPS2
Ig_C17orf99
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
116043459
NCBI-ProteinID:
XP_031146004
Ensembl:
ENSSLUG00000017658
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All DBs
Position
3:complement(40078044..40097106)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLAGLPEGIPTETRLLDLSKNRLKTLGNEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLRLSYLNVTVMKDYSFKRLY
RLRVLEISQMPALDTMTAKCLFGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
HTVEGNKLFNLQKLQAFYLAGGRLAAIEPYSFRGLNHLRVLNVSSNSLNTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIMDYKVQESHVDEGTTVHFACQAEGDPVPVIMWLSPKKEYITTKTVGSRLSVSN
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVTFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEEPEEVSPTEAPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtagaatggtgtctggggaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctcatgctgggcaccgtcctttctggctccacc
accggttgcccctcccgatgtgactgcaacggtcaggagcgttcagtcgtgtgccatcga
cggagactggcaggtcttcctgagggcatacccacagaaacaaggctgcttgacctcagc
aagaaccgtctcaaaactctggggaacgaggagttcatcaattacccccagctggaggag
ctgcaacttaacgaaaacacaatttcatccattgagcctggcgcttttagcaaccttatg
aaccttcgaactctaggtttgcgcaacaaccagctgaagctcattcagctgggggtgttc
acaggcctgaccaacctcacccagctggatattagtgagaacaaaattgtcattctgctc
gactatatgttccaggagctgtacaacctgagggctctggaggttggtgacaatgaccta
gtattcatctcaccccgatcatttcatggcctcagcaaccttgaaagcctcaacatcgag
ggatgcaatcttgcctcagtgcccactgatgcccttagccatttgcataacctgttgtca
cttcgattaagctatctgaacgtcacggtcatgaaggattactcctttaagaggctgtat
cggctcagagtgctggagatttctcaaatgcctgccctggataccatgaccgctaaatgc
ttgtttggactcaacctcacatcattgtccatcacaaactgtaatcttactgtcatcccc
taccaagccatcagtcacctaagatatctccggtttttgaatctgtctttcaatcccatt
catactgtggaagggaacaaactgttcaatctgcagaagctccaggctttttatttggct
ggtgggagattagctgccattgagccctactctttccgaggactcaaccacctccgtgta
ctcaatgtatccagcaacagcttgaacaccctagaggagtcagttttccactcagtggga
aacctggagactctggctttgtatgacaacccattggcctgcgactgtcgcttgctctgg
gtcttccgccggcggtggaggctcaactttaacagacaacagcccatgtgtgcttcacct
gaggttgttcaaggaaaagagttcaaggacttcccagacattctcccttctgactatttc
atctgccagaaatcaaagatcatggattataaggttcaagaaagccatgtagatgaagga
actacggttcattttgcttgccaagctgagggtgatccagtccctgtgataatgtggcta
tcccctaagaaggaatacatcactaccaaaactgtggggtcaaggctttctgtttctaat
gagggcacattggaggtgcgttacgcccaaatccaagacaacggcacctacttgtgcatt
gcaagcaatgcagcaggcaatgacaccaaagctgctcacctttttgtgcatagctattcc
cccaattggccccaccagccaaacaagacatttgccttcatttccaaccagcccagcgat
gaaggtgctaatgtgacccgggccacagtcacatttccttttgatgtaaagacacttatc
attgcaaccactatgggatttatctctttcctcggagttgtcctcttctgtcttgtaata
ttatttctctggagtcgggggaaagacaatactaagtcaagtatagaggttgaatatgtg
ccacgtaaagaagaaccagaggaggtcagtccaaccgaggcacccatacaattcaacatg
aaaatcatgtga
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