Sander lucioperca (pikeperch): 116043653
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Entry
116043653 CDS
T07345
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116043653 (zgc:193690)
03015 mRNA surveillance pathway
116043653 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116043653 (zgc:193690)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116043653 (zgc:193690)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116043653 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116043653
NCBI-ProteinID:
XP_031146341
Ensembl:
ENSSLUG00000011605
LinkDB
All DBs
Position
12:34083526..34092636
Genome browser
AA seq
487 aa
AA seq
DB search
MSEDSWAVAVDVQEATNPSTQFDFSKKVERVRGPRNIRGDINGNILPEKTENGDSKREAE
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNLGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPDNKWTQCLCIAPTY
ELALQIGQVIEQMGALCPDVKLAYGIRGNRLERGVKLQEQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAN
LTKEGHQVALLSGEMTVEQRAAVIDRFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDVINQIEMHFNRRITKLDTSNLE
EMENLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcggttgctgtcgatgttcaagaagccacaaatccatccaca
cagtttgacttctcaaagaaagttgagcgagtgcgtggtcctcgtaacataagaggagac
ataaatggcaacatattgccagagaagactgaaaatggagattcgaaaagagaagcagaa
aaagtggacctcgctgaacagtccctgttgaataagctgatccgccgctctctggtgcgg
aacagaaaccaggtggaggtcctgcagcgggaccccacctctcctctctactccgtcaag
acatttgaagagttgagactgaaacctgagctgctgaaaggtgtgtacaacctgggtttc
aacagaccatccaggatccaggagaatgccttgcccatgatgttggcacagccacctcag
aatctgatcgcccagtcccagtctggcacgggtaaaactgctgctttttctcttgccatg
ctcagccatgtaaacccagacaataagtggacccagtgcctttgcatcgcgccaacatat
gagctcgctctgcagatcggccaagtaatcgagcaaatgggggcattgtgccctgatgtg
aaactggcttacggcattcggggcaacagactggagcgaggcgtgaagttgcaggagcag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagtacaagctcattgac
cccaagaagattacgatgtttgtgctcgacgaggctgatgtgatgatcgccacgcaaggc
caccgggaccagagcattcggatccatagacagctgacaaaggactgccagatgctcctt
ttctctgcaacctttgaggactctgtgtggaggtttgcagagcaggtggttcccgatccc
aacatcatcaggctgaagcgtgaggaggagacactggacacaatcaagcagttctacgtg
ctctgtagggagaaggaggacaagttcacagcactctgtaatctttatgggagccttacc
attgcacaggccatgatcttctgccatactcgcaagatggctgcttggctgactgcgaac
ctgaccaaagagggtcaccaggtggcgttactgagcggggaaatgaccgtggagcagaga
gctgccgtcatcgatcgcttcaggaacggcaaggagaaggtcctagtgaccacaaacgtg
tgctccaggggtattgacgtggaacaagtgtcacttgtggtcaactttgacctccctgtg
gacatggacgggaacgccgacaacgagacctaccttcaccggattggccgcacaggacgc
tttggcagaagaggatttgccgtcaatatggtggacagcaaacacagcatggatgtcatc
aaccaaattgagatgcatttcaaccggagaatcacgaaacttgacacgagcaatctggaa
gaaatggaaaacctgatcagctga
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