Sander lucioperca (pikeperch): 116043839
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Entry
116043839 CDS
T07345
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116043839
Membrane trafficking [BR:
sluc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116043839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_2
TPR_8
TPR_10
SH3_1
SH3_9
TPR_7
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
116043839
NCBI-ProteinID:
XP_031146679
Ensembl:
ENSSLUG00000017805
LinkDB
All DBs
Position
17:complement(30273744..30307101)
Genome browser
AA seq
1326 aa
AA seq
DB search
MSARSDRDIGGRGPRRKSATDGQQHREAAEKSNRPSRIVRGFSRDAASLKGTVSTCEENF
PTALPVLLDVVRGPEQLPADEHSQEMLRGKLRILQADSTEVTALFTELSTHLISINSEEK
VIYVTFKTFEEIWKFTTYYTIGFLGRCMENLLLDQKFWLTSLEEDIAIEVSIQEDTLNLM
YKGILMQEGSLFASCSTNQMFDSSTSGGDLYLEQGDIAHFEPPFLGSGWTVLCLADGARG
TAPKPALEPVIPFHQWFLKSCAESILVGDGKPACDFPLQFARGTCLATVEYDAEGPDELS
VAPGDRIIIAGLLGSCFDWFLGRKEATGEVGLVKTSLVKPSADTYNSADIFLDGEEGTFF
SLQEDKVIEEMTASLKKKSQNDTGQNYKLDMFSYQDSGKKASSSKVDTQQADLKRNIQRI
IDQGKDSSSDSVVTVNGTLEDSVWATEAENPSPPCFTVQPVVEGNNNTENFIPLFSFLEG
QDNKIKFGIMYGLSSELLASSIFTGHSDKDELIAFLGVARETARKKRLLWSQTRLCFLLG
KLCAGRLKFSQARVYFEEALSVPQEGFTDLRLLASIYSNLIAIYLLQKNTESFFALTERL
VALLLGMPDCLECLEDNSALKYILKKAVLSHNKMAEARACHQLAKHHWTRAEGVRVVPYL
ERLLVLCAEAQRTWGISPSHEYLALGRLYSELQLPHLSVSSARRASIQPSATLTDCLSSM
GLVLDNVNRLFGITEQETSIPPQVAPYLYQALFSDKVQGRGSDRYHVLSHRLTVCLCQLF
CKHRMVGHAICHMHTLINNSPTSQRLRISVPERNSALIWLAWLHIDNNQPHVALDILDCV
LASMPEHCTTPQEGVVLNMRGVALRCMGDLRRAAESYQAAVDICQEYEDMPNWAVAQANL
GLLCLKAGAKGLAQRHLTEAVQLFSELDEKGHEANFIPVLLELGQHYVRQQQLDFGKGCY
EWALLLAISADLLDCQLTATKQLSRLYECESPEQAQCIIYSQHQVQLLRRTGDRGQEGDA
LVAISQLYLTLATERAYRVALDFTKTSLGIFIDLGCREKEAWGWLQAGKIYHLLDQTELV
DLYVQAAQDVALSTGDTKFILKLLEAAGDIFFNSNHDRDKAITFYRDRALPIAVKSSSVR
SRLRLCNKLTDLMLSLKLYEEAVEFAQTALDISITLGERLNERVAYHRLGSLYHSLDQYE
LAEHHYLKTLTLCPTTLQFDEETLYYVRVYQTLGDIIFNDLKDPFDAAGYYHLALAAAMD
LGNKRSQLQLCTRLATIYHNFLIDRELSLFFYQKARAFAAELNVRRINISPDQQCSSTTQ
YKTTGQ
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaggtcggaccgagacatcggcggccgcgggccccggagaaagagcgctaca
gacggccagcagcaccgtgaggcggcagagaaatcaaaccgacccagcagaatagtgcgt
ggtttctccagagatgctgcaagtctgaagggaactgtgtcaacatgtgaggaaaacttc
ccaacagctctgccagtgctgctggatgtggtccggggtccagagcagcttcctgcagac
gagcattcgcaggaaatgctgcgagggaaactgcgcattctgcaggctgacagcactgag
gtcaccgctctgttcacggagctgtctactcatctcatctccatcaacagtgaagaaaaa
gtgatttatgtgacatttaaaacatttgaggaaatatggaagttcaccacatattacaca
ataggtttcctaggtcgctgtatggagaatctgttgttagaccagaagttttggctcact
tctttggaggaggacatcgcaattgaggtttccattcaggaggacactcttaacctgatg
tacaaaggcatcctcatgcaggaaggctcattgtttgctagttgcagtaccaaccagatg
tttgacagctccacctctggaggggacctgtacctggagcagggagacatagcccatttt
gagcctccatttctgggctcagggtggactgtcctctgcctggccgatggagcccgaggc
actgcacccaaacctgctctggagccagtcatcccttttcatcaatggtttctcaaatcc
tgtgcagagagcattttagttggtgatgggaaacctgcctgcgacttccctctgcagttt
gccagagggacctgtctggcgacagtggagtatgatgctgagggcccagatgagctgagc
gtggcacccggtgatcgtatcatcattgcgggacttctggggtcttgttttgattggttc
ttagggcggaaggaggcgacaggagaagtgggtctggttaagacgagcctggtgaaaccg
tcagccgacacttacaactcagcagatatttttttggacggagaggaagggacattcttt
agtctgcaagaggacaaagtcatagaggaaatgactgcctccttgaagaagaaatctcaa
aatgatactggtcagaactacaaactggatatgttcagttatcaagactctggaaaaaaa
gcatcatcaagcaaagttgatactcagcaagctgacctgaagagaaatattcagaggatt
attgatcaaggaaaggactcttcatcagattctgtagtgaccgtgaacgggactctggag
gactcggtctgggctacagaagcagaaaacccaagccctccctgtttcactgttcagcca
gttgtagaaggaaacaacaacactgagaacttcattccccttttctcttttttggaagga
caagacaacaaaataaagttcggcatcatgtatggactgagttctgaactcctcgcctcc
tccatatttaccggtcactccgacaaagatgagctgattgccttcctgggagttgctagg
gaaacagccaggaagaagcgactcctttggtcgcagactcgtttgtgcttcctgctgggt
aagctctgtgctgggaggttaaagttcagccaggctcgggtttactttgaggaagccctc
agtgtcccacaagaaggcttcacggaccttagactgttggccagcatctactccaaccta
attgccatatatcttttgcagaaaaatactgaaagtttctttgctctgacagagcgactt
gttgccttgctactgggaatgccagactgcctggaatgcttagaggacaactctgctctt
aaatacatcctcaagaaagctgttctctctcacaacaaaatggcagaggcccgggcttgt
caccaattggcgaagcaccactggactcgtgctgagggggtgcgagtggttccttatctt
gagagactacttgttctttgtgccgaagctcaaagaacatggggcatctctcccagtcat
gagtacctcgccctgggaaggctatacagcgaactccaacttccccatctcagtgtcagt
tcagccaggagagcttctattcagccctctgctacactgactgactgccttagcagcatg
ggtctagttctggacaatgtcaacagactgtttgggatcacagaacaggaaacctccatc
ccacctcaagtggctccatatttataccaagcgctcttttctgacaaagtccaaggacga
ggaagtgatcgataccatgttttgagccatcgactcactgtttgtctctgccaactcttt
tgcaagcacaggatggttggacacgccatctgccatatgcatactctcatcaacaacagt
ccaacctcacagcgactccgcatctctgtcccagaaagaaacagtgccctcatctggctg
gcatggcttcacattgacaataatcagccacatgttgctttggatatcctggactgtgtc
ctagcttccatgccagaacactgcactacgcctcaggaaggtgtggtcctcaacatgcgt
ggcgtggcacttcggtgcatgggtgacctccggagggcagcagaaagttaccaggctgct
gtggacatttgccaagagtatgaggacatgccaaactgggctgtagctcaggctaacctt
gggctgttatgtctgaaggccggagccaaaggactggcgcagagacacctgactgaggcc
gtgcagctcttctctgagctggatgaaaaaggtcacgaggcgaatttcatcccagtgctg
ctggagctggggcagcactatgtgaggcaacagcagctggactttggcaaaggatgctac
gaatgggccctgctgctcgctatcagtgctgacctgttagactgtcaactgactgcaacc
aaacagctgagccgtctctatgagtgtgagagtccagagcaggcccagtgtatcatctac
agccagcaccaggtccagctgctgagacgcacaggagacagaggacaggagggagacgca
ctggtagccatcagccagctctacctcaccctggccacagagagagcgtacagggtggct
ctcgacttcaccaagaccagtttgggtattttcattgatctgggctgcagggagaaggag
gcgtggggctggctgcaagctgggaagatctaccacctgctggatcagacggaactggtg
gacctttacgttcaggcagctcaggatgtcgctctgagtacaggagacaccaagttcatc
ctgaagcttctggaagctgcaggcgacattttcttcaacagcaaccacgacagggacaag
gctatcaccttctacagggatcgtgctctgcccatcgctgtgaagagcagcagtgtgcgt
tccaggctgaggttgtgtaataagttgactgatctgatgctcagtctcaagctgtatgag
gaagctgtggagtttgctcagactgcactggacatcagtattactctgggtgagcgtctg
aatgagcgagtggcttaccatcgactgggctctctgtaccacagtctggaccagtatgaa
ctggctgaacatcattacctgaaaaccctgaccctctgtccaacaactctgcagtttgat
gaggaaacactgtactatgttcgggtgtaccaaacgctgggggacatcatattcaatgac
ctgaaggacccatttgacgctgcaggctactaccacctggctctggctgcagccatggat
ctgggcaacaagaggtctcagctgcagctgtgcacccgcctcgccaccatctaccacaac
ttcctaatagaccgggagctctctctcttcttttaccagaaggctagagcatttgctgca
gagctgaacgtgaggaggattaatatctcaccggatcagcagtgtagcagcaccacacag
tacaagaccaccggacagtag
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