Sander lucioperca (pikeperch): 116043862
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Entry
116043862 CDS
T07345
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04142
Lysosome
sluc04144
Endocytosis
sluc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116043862
04142 Lysosome
116043862
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116043862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116043862
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116043862
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116043862
Exosome [BR:
sluc04147
]
Exosomal proteins
Proteins found in most exosomes
116043862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116043862
NCBI-ProteinID:
XP_031146716
Ensembl:
ENSSLUG00000013439
LinkDB
All DBs
Position
8:complement(28849788..28885139)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVKRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPSNAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRASIDAYDNFDNITLAQGL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPS
FGYSM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctatccgcttccaggagcacctacagctccagaacctgggaatc
aacccagccaacattggattcagtactcttactatggagtccgacaagttcatctgtata
agagagaaagtgggagagcaggcccaggttgtcatcatcgatatggccgaccccaataat
cccatccgcaggcccatctctgcagacagtgccatcatgaaccctgccagcaaagttatt
gcccttaaagacgcggcaaaaaccctgcagatctttaacattgagatgaagagcaagatg
aaggctcacacgatgaccgatgacgtgaccttctggaagtggatctccctcaacaccgtt
gcccttgtcacagacaatgcagtctaccattggagcatggagggtgattctcagccaatc
aaagtctttgaccgtcactcaagcctggcaggctgccagatcatcaactaccgcactgat
gccaaacagaagtggttgctgcttattggcatttcagcacagcaaaaccgtgttgtcgga
gccatgcagctgtactctgtggacaggaaagtgtctcagcccattgaggggcatgccgcc
ggctttgcacagttcaagatggagggaaacactgaagagtcaaccctgttctgctttgca
gtgcgaggacaggcaggaggaaagctgcatatcattgaagtagggactccgccgactggg
aaccagccatttccaaagaaagctgtggacgttttctttcctccagaagctcagaatgac
ttccctgttgccatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatat
ggctacatccacctctatgacttggagactggaacttgtatctacatgaacaggatcagt
ggggagaccatttttgtcactgccccccatgagcctactgcgggtatcattggagtcaac
aggaaaggacaggtgttgtcagtatgcgtggaggaggaaaacatcattccctatatcacc
aatgtgctccagaacccagacctggcactccgcatggctgtccgcaacaaccttgccggt
gccgaggagctgtttgcccgcaaattcaacaccctctttgcagcagggaattactcagaa
gccgccaaggtggcagccaatgcacccaagggtatcctgcggaccccagacaccatccgt
cggttccagagtgttccagcccaaccaggccagacgtctcccttgctccaatactttggc
atcttgctggaccaaggccaacttaataagtttgagtctctggagctgtgcaggcctgtc
ctccagcagggccgcaagcaactgttagagaaatggttaaaagaggacaagctggagtgc
tctgaggagcttggagacttggtgaagtctgtagatcctactcttgccctcagtgtttac
ctcagagccaacgttcccaataaggtcattcagtgctttgcagagactggacagttccag
aagattgtcctctatgccaagaaggtgggctacactccagactggatcttcctgctaagg
aacgtaatgcggatcagtccagagcagggacttcagttctcccagatgctggtacaggat
gaagagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatc
cagcagtgcacatccttcctactagatgccctgaagaataacagacccacggaggggcca
ctgcagacccgcttgctggaaatgaatttggtgcatgcaccacaggttgcagacgcaatc
ctgggcaatcagatgttcacccactatgaccgtgctcacgtggcacagctgtgtgagaag
gccggcctcctgcagagggcgctggagcattatactgacctgtatgatattaagcgtgct
gtggtgcacacacaccttctcaacccagagtggttggtgaatttctttggctccttgtca
gtggaggactctctggagtgtctgagggccatgctatctgcaaacatccgccagaacctg
cagatctgtgtccaggtcgcctccaagtaccatgagcagctcactactcagtccctcact
gaactgtttgagtcgttcaagagctttgaaggtttgttctacttcttgggttccattgtg
aacttcagccaggatccagaggtccacttcaaatatatccaggctgcctgcaagacaggc
cagatcaaagaggtggagagaatctgccgagagagtaactgctacgaccctgaacgtgtg
aagaacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgac
cgctttgattttgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaaatac
attgagatctacgtgcagaaggtgaacccaagccgtctgccggtggtcattggagggtta
ctggatgtagattgtgctgaggatgtgattaagaacctgattttggtggttagagggcag
ttctccacagacgaactggtggctgaagtggagaaaagaaatcgactgaagctgctgctg
ccttggttagaggctcgtattcatgaaggttgtgaggagcctgctacccacaacgccctg
gccaagatctacattgacagcaacaacaaccctgagcgtttcctaagggagaacccatac
tacgacagccgcgtggtcggcaagtactgtgagaaaagagacccccacctggcctgtgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcgctg
ttcaagagtctgtcccgctaccttgtaaagcgcaagaaccctgagctgtgggcgagcgtg
ctgctggagaccaacaattacagaagaccactcatcgaccaggtggtccagacagccttg
tctgagacccaggatccagaggaggtgtccgtcacagtcaaggcctttatgaccgccgac
cttcccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagc
gagcacagaaacctccagaatctgctcatcctgacagctattaaagctgaccggacacgt
gttatggagtacatcaaccgtctggacaactatgatgccccagacattgcgaacatcgcc
atcagtaatgagctgtttgaggaggcctttgctatttttagaaaatttgatgtcaacacc
tctgctgtgcaggttctgattgagcacattggtaacctggacagagcttatgagtttgct
gagcgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcagaagggc
ctggtcaaagaagccattgactcttacattaaggcagatgacccttctgcttacatggag
gtgggacaagctgcagcccaaagcgggaactgggaggacctggtcaagtttctgcagatg
gcccgtaagaaggcccgcgagtcgtacgttgaaacagagttgatctttgccctggccaag
accaaccgcctggctgagctggaagagttcattaacggacccaataatgctcacattcag
caagtgggtgatcgttgttatgacgacaagatgtatgaggcagccaaactgctctacaac
aatgtgtccaactttggccgtctggcctccactctggtgcacctgggagagtaccaggca
gctgtggacggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcg
tgtgtagatgggaaagagttccgtcttgcccaaatgtgtggcctgcatattgtcgtccac
gccgatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgctggaggctgcccttggactggagcgtgctcacatgggtatgttcactgag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctgtggggg
gagctggtgttcctctacgacaagtacgaggaatacgacaacgccatcatcactatgatg
aaccacccatctaatgcctggaaggagggccagttcaaggacattgtcaccaaggtggcc
aatgtggagttgtactacaaggccgtccagttttatctggagttcaaaccattgttgctg
aacgacctgctcatcgtcctctctccaagactggaccactcgcgcgctgtcaacttcttc
agcaaggtgaaacagctgcctctggttaaaccttacctaaggtctgtccagaatcataac
aacaagtcagtaaatgaggccctcaacaacctcttcatcattgaggaagactatgcggca
ttgcgtgcttccatcgatgcctatgacaactttgacaacatcacactggcccagggcctg
gagaagcatgagttgattgagtttaggaggatcgcagcctaccttttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaagctctacaaggatgccatgcag
tacgcatcagagtccaaagacatcgagctggcagaggagctcctggcttggttcctgaat
gaggacaagaaggaatgttttgcagcctgcctattcacctgctacgacctgctgcggccc
gacgtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaa
ctcgaagcctccgagtccctgaggaaacaggaggagcaagctactgagtctcaacccatt
gtttacggcacaccccagctcatgctcacagcagggcccaacgtggccgtgcctcctcag
cagccctatggctacggttacacagcagcaccaggttacggccaacccccacagcccagc
ttcggttatagcatgtga
DBGET
integrated database retrieval system
