Sander lucioperca (pikeperch): 116043870
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Entry
116043870 CDS
T07345
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03440
Homologous recombination
sluc04068
FoxO signaling pathway
sluc04110
Cell cycle
sluc04115
p53 signaling pathway
sluc04210
Apoptosis
sluc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116043870 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116043870 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116043870 (atm)
04210 Apoptosis
116043870 (atm)
04115 p53 signaling pathway
116043870 (atm)
04218 Cellular senescence
116043870 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116043870 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116043870 (atm)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116043870 (atm)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116043870 (atm)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116043870 (atm)
Protein kinases [BR:
sluc01001
]
Serine/threonine kinases: Other
PIKK family [OT]
116043870 (atm)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116043870 (atm)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116043870 (atm)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
Check point factors
Other check point factors
116043870 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_ATR
DUF3349
Motif
Other DBs
NCBI-GeneID:
116043870
NCBI-ProteinID:
XP_031146731
Ensembl:
ENSSLUG00000020095
LinkDB
All DBs
Position
8:28356875..28383178
Genome browser
AA seq
3091 aa
AA seq
DB search
MSLALHELLVCCKGLENDKATERKKEAERFRRLIRASEVVQELDRTSGPKAKGSKQLTWD
AVFRFLQRYVQKETESMQSSKSVTATTLATRRKKMAEMCSLIKYFIRYANKRGPRLKCSE
MLKHVMDVLQNSYSCSAYGEDYSSLLLKDILSVRKYWCDIPPQQWHNILDLYCNLFNTSS
KSINRVLVSRVIHTVVQGCCMQTDGFNDYLFSFFSKALLNARQEKHLTVLEHLVSGLNIF
LRSAAMNCRMRVCHLGEELLPSILYVWADMRPSAALKEEIVEFFNLQICVHHPKGAKTQD
TGAHAEDWTRWRSLLYNLYDALIREISQIGSRGKYVTGTRHIAVKDNLIELTADICHQLF
SDNNDTHVLEVTQTSLRATHMGSPTNGAASKRRRIELGWEVLRDHLQPQHNDFDVIPWLQ
ITAVLTFKYPSMVPSQEVIPLLSVLYQLLAEQRRGERGPYVLRCLREVAQCQARCPERAQ
VHRTELARMWGRVWTLALRGVSSPQTEALSLDLLSSIVHGGLINMDREFWKLFSGSACKP
STGGALCLAQALLKCSAPKSIISSSGWDYVGVTEGSASPNLKETLISWLLMTDQSEEMED
SSRPHPIICRDFPFNLIANILVSLTLKDTRTGLKFLLGTKGMESAFFQEQTSSKAKDLEE
IERLYLQFSFNALHSATQKTDESVTTASSGGQFTAVPCLRKKLEQSLLCVADNLLNCYSP
DSQSTPPECLVRCFSLLTGVLASYVSAGFLTEEEACRSQLFTKAKALAQDFSGFVSSVKV
KMTEEGTMSTLRSVMKLCTQSASRKNKDNIHPISSSLFIMILPASLLSELAEICKLLLSS
VSKRVSVVDEDDHMDDDWDVTRTQQGDDIDLFDEGEESHSSTNGTHRQKGDNSDTSCGPG
ARSLLADDYLVQQDLALLAVLEFLCECGSIQPVHGLLFKPQDVRRRLLQLVEQMDFNKAL
HLNMYLVLLKKLPAEDSLSPEEFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSIKSLGK
THHVPEEMRHVQGSLLKVVSGFCFLSQTGKCMAAVRAALVRCLVALLEADPCCKWAFLSI
RGPDGEEDRPVSVILPSHLADAHHQVRMLVAMSVERLFLELRPEHPDKRNMLPLKHQQAA
FENVYLKAQEGMKLQRSSSSEDQRDESFNRKATLLKSLSVVLCCSPVCEKQSLFALFQSY
KENNIEEQLIKKMLCSVSRALGYRSGKTLVSSHLYYLVAEWLAQRQSDDRYTLGSFPYTL
LDHDTVKDFYKSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWKELLANCFPKIMVNILPYF
ALPGQESQVAQQREKAHKVYDLLKDANCLGKQQIDNLIHSNLADIVVELLMTLYEGSGAE
GDKGDLKRFTGELDPVPNPPYFSSYVIKATLDYLSMCHSANHKTLVAILSKTPISIQRIL
LAVCERAAETTNSYERHRILLMYHLFVSLLLREVKDGLGGAWAFVLRDIIYTLIHHINSR
PVHCDEVSNRSLSLCCDLLNAVCRAALQFCDDALDCHLQVITGTLTALVSSRPTISQQVL
SLLQFLVIENQQKLKGAISRLEPFPDLPEFRELRSVQHKLKHNTGTFTLRQEIAHFLSVT
SCDSLPLTRLEGLKELTRQLHDNKGQIRELLKECQAEPTDSVLVKLVLSLLQLCKLAVNH
QGGANILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAVSLFTSTESQCLYIILNCMNDA
LTQQRIEVRQAAAQCVMSILATQSGVDFWEQHKDNRDPMLAYLNPFRKAKKKGEAVSAEG
SSEAREKLESQEFWIPQAGSHKAWLKALCTALLDSGGVRSEALLLSRPLCLVRVDCCQRL
LPLIIHSILLEDSNGSWRELLSSHIQDFFSFCSRSAQASSRSATPLNSDSESDAASQGLY
DKTSLRTMLAVIDYLRHQQRPLDADSNSCGTVCDSNFWLELNYLEVAKAAQSCSAHFTAL
LYTEIYVDKIKANMEDSRRTKSRVTRKINFEENSQNFTISSLTEKSREDTNISLQELLIE
VYRSIGEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLHSALPEVTRQVGIVEG
LQNFGLCSILATYMRGLESEGVEWGAELRELRFQAAWRNTQWDCELLERSEKSKPGFHES
VFCSLQALRDKEFSIFDETMKQARGADVEELCRGSLEAVSSLYPALRNLQSIRELESVKQ
LFSRPFSDGTLTEVCSQWRQHSQLLADSDFALVEPILAVRSVAQHTLMSTVGNPDSTQYL
SSVLSDHLMELCRLARKAGNTQLAERAVFQMKQHGGGGSWASSPVLSWQLEEAQVFWAKG
EQGLALGLLREMIRNLEEKVDLNPALVPVYTECLRLCGNWLAETCLESPGVILEKYLERA
VEVIEQESGVQDSRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKEEV
DLMKERKVTSNRYTIKVQRELELDEKALSNLQADRQRFLCKAVENYIQCLEQGEEHDTWV
FRLASLWLENADVKAINVMMKKGVKQIPSYKFLPLMYQLAARMGTKMVTGITEDTGFHDV
LIDLIYRASLEHPHHTLFIILALVNANKDENFCKTRLSKSAPRQPSPFDLERSDVARKII
SAIRKKRGEMIRGIERLCDAYITLAYMDASKHKTEKKAIPIPADQPIMQIKDLNEVVIPT
MEIKVDPSGCYDNLVTVRSFLPQYHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDA
VMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPNKG
AHKRFRPRDWTNLACRRKMMEAQKLAFDEKLQAYSEVCKNFRPVFRYFCMERFLDPAVWM
EKRLAYTRSVATSSIVSYIVGLGDRHIQNILVDEQTAELVHIDLGVAFEQGKILPTPETV
PFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLK
AFYLQHDEQQELNATLSSTMGGDDIDNHRKSSDSQSFNKVAERVLLRLQEKLKGVEEGTV
LSVGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
9276 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggctcttcatgaactcctggtctgctgcaaggggctggagaatgataaagct
acagagaggaagaaagaagctgaacgcttcagacgactaattcgagcttcagaggttgtg
caggagttggatcgtacatctggacctaaagctaaaggctccaagcaactcacatgggat
gctgttttcagatttctgcagcgttatgtccagaaggagacagaaagcatgcaatcaagc
aaatctgtcacagcaactacgctggccacacggcgaaagaagatggctgaaatgtgcagc
ttgatcaaatacttcattcgctacgcaaacaaacgcgggcctcgtctaaagtgcagtgag
atgctgaaacatgtgatggacgtcctgcagaattcatacagctgttcagcctatggagaa
gattatagcagcctccttttaaaggacatcctctctgtccgcaagtactggtgtgacatc
cctccacagcagtggcacaatattttggacttgtactgcaacttgttcaacacttcatcc
aagtccatcaaccgtgttttggtgagcagggtgatccacacggtggtgcagggctgctgc
atgcagactgacggattcaacgactatctgttcagcttcttctccaaagcactgctaaat
gccaggcaggagaaacacttgactgttttggagcaccttgtctctggtctcaacatcttc
ttgagatctgcggccatgaactgtcggatgagggtgtgtcacctgggagaggagcttctt
ccttctatactgtatgtctgggcggatatgaggcccagcgctgctctcaaagaggagatt
gtggagttctttaacctgcagatttgtgttcaccaccccaaaggagccaagacacaggat
acaggtgctcatgctgaggactggaccaggtggcggagtctgctgtacaacctgtatgac
gccttaatcagagaaattagccagataggcagcagagggaagtacgtcacagggacacga
cacattgctgtcaaagacaatctcattgagctcacagctgacatctgtcatcagctgttc
agtgataacaatgacacccatgtattggaggtgacccagacctccctcagagccacccac
atgggcagtcccaccaatggagcagccagcaagcgacggcgcatcgaactaggctgggag
gtcctccgggaccatctgcagcctcagcataatgactttgatgtcataccatggctgcag
atcactgcagtgctgacctttaagtacccgtccatggtgcccagccaggaggtaatccca
ctgctgtcagtgttgtaccagctcctggcagagcagcggagaggagagagggggccgtac
gtgctgcgttgtctgagggaggtggcccagtgccaggcccgctgcccagaaagagcccaa
gtccacaggacggagctggcccggatgtggggtcgggtgtggaccctggcactgcgaggg
gtcagctcaccacaaacagaggccctcagcctagacctgcttagctccattgtccacggt
ggactgatcaatatggacagagaattctggaagctcttctctggatcagcatgtaaacca
tctacgggtggtgctctctgtctagcccaggccctactaaagtgttcggcccctaaaagt
atcatctccagctcaggctgggactatgtgggggtcacagagggatctgcctcacctaac
ctgaaggagaccctcatatcctggctgctgatgacggatcagagcgaggagatggaggat
agctccagacctcaccctatcatttgcagagactttcctttcaatctaatagcaaacatc
ctggtctccctgaccttgaaagacacaagaactggcctgaagtttctgctgggtactaaa
ggaatggaaagtgccttttttcaagaacaaacctcatccaaagccaaagacctggaagag
atcgagaggctttacttgcagttcagcttcaacgcgctgcactcagcgacgcaaaagact
gacgagtcagtgacgacggcttcatctggaggccaatttacagccgtcccctgcctcaga
aagaagttggagcaatccctgctttgtgtggctgacaacttgctcaactgctactctcct
gattctcagtccactcctccagagtgtctggtgcgctgtttcagtctgctgactggtgtt
ctagcaagttacgtgtccgctgggtttctgactgaggaggaggcctgccgctcacagctc
ttcactaaagccaaggccctggctcaggacttcagcggttttgtttccagtgtgaaagtg
aagatgacagaggaaggaaccatgagcacactgagatccgtcatgaagctctgcacacag
tcagccagcagaaaaaacaaggataatattcatcctatctcctccagtctgttcattatg
attctgccggccagtctcctcagtgaactagctgagatctgcaaactgttgttaagcagt
gtttctaagagagtcagtgttgtggatgaagacgatcatatggatgatgactgggacgtg
accagaactcaacaaggagacgacattgacttgttcgatgagggcgaagagtcccacagc
agcaccaatgggacccacagacagaagggagacaacagtgacacttcctgtgggccaggt
gcaagaagtctgttagccgacgattatctggtccaacaggacctggctctccttgcagtc
ttggagttcctgtgtgagtgtggctccatccagcccgtccacggtctactttttaaaccg
caggatgtgcgacgcaggctgctgcagttggttgagcagatggactttaacaaagccctg
cacctcaacatgtatctcgtcctgttgaagaagcttcctgctgaggactcgctctctccg
gaggaatttgattcactgcttcgtcctctagcggacctgtgttctctgtaccgtcaggac
caagagatctgtgctgctgttctgctgggtttgttaccctccatcaagagcctcgggaaa
acccaccacgtgccagaggagatgagacatgttcagggatctctgctaaaagtggtgtcg
ggattctgtttcctgagccaaacaggcaaatgcatggcagctgtacgagctgctttagtg
agatgtctggttgccttgctggaggctgacccgtgttgtaagtgggcattcttaagtatc
agagggcctgacggagaagaagatcgcccagtatctgtcatccttccatctcacctcgca
gatgcccaccaccaagtccgcatgctggtagccatgtcagtggagaggttgtttctggag
ctaagaccagagcatccagataagagaaacatgctgccgcttaaacaccagcaggcggct
tttgagaatgtttacctgaaggctcaggaaggaatgaagctccaaagaagcagctcttca
gaggaccagcgcgacgagtcgtttaaccgcaaggccaccctgttgaagagtttgtctgtt
gtgctgtgttgtagcccagtctgtgaaaaacagtctctgtttgccctcttccagtcctac
aaggagaacaatatagaggaacagctcatcaaaaagatgttgtgcagtgtatccagagcg
ctgggctacaggagcgggaaaacacttgtcagttctcacctgtactacttggtagctgag
tggctcgcgcagagacagtctgatgatcgctacactcttggatcttttccctacaccctc
ctagaccacgacacagtcaaagatttctataagtcttcctaccaggtcttgatccctcac
ctggtcttcctcgatgactttgagcaggtgaagtctattggcaggtatcttgagaaggac
tggaaagagttattggccaactgttttcccaagatcatggtcaacatcctgccatacttt
gccttgcctggccaggagtcacaggtcgcacagcagagagagaaggcccacaaagtgtac
gacctgctcaaagatgccaactgtctgggcaaacagcaaattgacaacctgatccacagt
aacctggcggacatagtggtggaactgctgatgactctgtatgaaggaagtggagctgaa
ggggacaaaggagacctaaaacgctttacaggggaactggaccctgtaccaaacccacca
tacttcagctcttatgtcattaaagctacactggactacctcagcatgtgccatagtgca
aaccacaaaactttggtagccattctgtcaaaaactccgatttctatccagaggattctg
ctggcggtgtgtgaaagagcagcagagacgaccaacagctatgaacgccatcgcatcctc
ctcatgtatcacctgtttgtcagcctgctgctcagagaggtgaaggacggcctgggagga
gcctgggcctttgtcctcagagacatcatctacacactcattcaccatatcaacagcaga
ccagttcactgtgatgaggtttctaaccgaagcctctccctgtgctgtgacctgttgaac
gctgtgtgtcgggcagctctgcagttctgtgatgatgctctagattgccacctacaggtc
atcactgggactctcacagctctggtgtccagtcggcccaccatctcacagcaggtgctt
agtctgttgcagtttctcgtgatagaaaatcaacagaagttaaaaggagccatcagcagg
ttggaaccttttcctgacctccctgaattcagagagctgcggtctgtacagcataagctc
aaacataacactgggacctttacactgagacaggagatagcccacttcctgtcagtgacg
tcctgtgactccttacctctgaccagactggaggggctgaaggagctcaccagacagctg
catgacaacaagggacagatcagagagctgctcaaagagtgccaggctgaacccactgac
agtgtgctggtgaagctggttctcagtctgctgcagctctgtaagctagcagtcaaccac
cagggaggagccaacattttagaggcagcaggcagctgtctgggagaactgggtcctgtg
gatttctccaccatcgccctacttcatggcagagaccccctttatgaaaaggctgtgtct
ctcttcacctccactgagtcgcagtgtctttacatcatcctcaactgcatgaatgatgca
ctcactcaacagcgtattgaggtgaggcaggcagccgctcagtgtgtgatgagcatcctc
gccactcagtctggagtcgacttctgggagcaacacaaagacaacagagaccccatgctg
gcctacctcaatccttttagaaaggccaagaaaaagggggaagctgtgagtgctgagggg
agttcggaggccagggagaagctggagagtcaggagttttggattccgcaggcgggcagc
cacaaagcctggctgaaggctctgtgcaccgccctgctcgacagcggaggagtcaggagt
gaagctctgctgctgtcacggccattgtgtctggtgagggtggactgctgtcagaggctg
ctgcccctcatcatccactccatccttctggaagactctaatggttcgtggagggagctg
ctctcctcccacattcaggacttcttcagcttttgttccagaagcgctcaggcctccagt
cgttctgccacacctctcaactctgactccgagtcagacgctgccagccagggcttgtac
gacaagacctcacttcgtaccatgcttgctgttattgactatctgagacaccaacagaga
ccactggacgctgatagcaactcctgtggcacagtgtgcgactcaaacttctggctggag
ctgaactatctggaggtggccaaagctgctcagtcctgctcagcacatttcaccgctctg
ctgtacactgagatctatgtggacaagatcaaagctaacatggaggacagtcgaagaacc
aagtccagagtgacacgtaagataaattttgaagagaacagccagaacttcaccatctcc
agcctgactgagaagagtagggaggacactaatatcagcctacaggagctgctgattgag
gtgtatcgcagcatcggagagcctgatagtctgtatggctgcggcggggagacgatgacc
agtccgctgacaaggattcgaacctatgaacatgaggctatgtgggggaaggccctgact
tcatacgaccttcactctgctctgcctgaagtcactcgacaagtgggaattgtggagggc
ctgcagaactttggtctgtgcagcatccttgccacctacatgaggggtctggagagtgaa
ggggtggagtggggagccgagctgagagagcttcgcttccaagccgcctggaggaacaca
cagtgggactgtgagctgttggagaggagtgagaaatccaaaccaggcttccacgaatca
gtgttttgttccctgcaagcgctgagggacaaagagttctccatatttgatgaaactatg
aaacaggccaggggtgcagatgtggaggagctgtgcagaggcagtctagaggctgtgtct
tctctgtacccggctctcagaaacctgcagagcatcagggagctggagagtgttaaacag
ctcttttctaggcccttctcagatgggactctgacggaagtttgcagccagtggcgacag
cactcccagctgctcgctgacagtgactttgctttggtggagcccattctggctgtccgc
tctgtggcccagcacaccctgatgtccacggtgggaaacccagacagcacccagtacctt
agctctgtgctcagtgaccacctcatggagctctgccggttggctcgcaaggctgggaat
acacagctggcagagcgggcagtcttccagatgaagcagcatggtggtggagggtcctgg
gcatcatcccctgtgttgtcatggcaactggaagaagcccaggtgttctgggcaaaagga
gagcagggactggcgctgggcctgctaagagagatgatacgcaaccttgaagaaaaggtg
gacttgaatcctgctctggtcccggtctacaccgagtgcctcaggctgtgtggtaactgg
ctggctgagacctgcctggaaagccccggagtaatactggagaagtacctggagagggcc
gtggaggtgatcgagcaggaatcaggagttcaggactccaggctgcagagtcagcggact
gaggccttcctgtcactggcccgcttctctgacgctcagtaccagagcatcgacaaatac
atgaattcctctgagtttgagaacaagcaggcgctgctggagaaggccaaagaagaagtg
gacttgatgaaggagcgtaaagtgacgtccaacaggtacacaataaaggtgcagagagag
ctagagctggatgagaaggccctgtccaacctgcaggcagacagacagcgtttcctgtgt
aaggcggtggagaattacatccagtgtctggagcaaggtgaggagcacgacacctgggtg
ttccgcctggcttcactctggctggagaatgccgacgttaaggccataaacgtcatgatg
aagaaaggggtgaagcagattccttcctacaagtttctgcctctcatgtatcagctggca
gctcgcatgggaaccaagatggtaactggcatcactgaggacacgggcttccatgatgtt
ctcatcgatctgatctaccgagcgtctctggagcaccctcaccacacactcttcatcatc
ctcgccctggtgaatgccaacaaagacgaaaacttttgcaagacccggctgtctaagagc
gctccccggcagccctcaccatttgacctggagcgctccgatgtggcccggaagatcatc
agtgcgatcaggaaaaagagaggcgagatgatccgagggatcgagcgtttgtgtgatgcc
tacataactctggcttatatggacgccagcaaacacaagacagagaagaaggctattccc
atccctgctgatcagcccatcatgcaaatcaaagacctgaatgaggttgtcatccccaca
atggaaatcaaggtggatccatctggttgctatgacaacctggtgactgtcaggtccttc
ttgccccagtatcacctggctggaggagtcaacctgcccaagatcattgactgtgtcggc
tctgacggcaagagcaggagacaactggtcaagggtcaggacgacctgcggcaggatgca
gtgatgcagcaggtttttagcatgtgctccatgctgctgcagcgcaacacggacactcgc
aagaggaagctcaacatcagacgatacaaggtggtgccgttctcacagcgtagcggtgtg
ttagagtggtgttctggcacagtgcctattggggagtttctggtggatcccaataaagga
gcccacaaacgcttcagaccccgggactggaccaaccttgcctgccgcaggaagatgatg
gaggctcagaagctggcgtttgatgagaagctccaggcctacagcgaggtgtgcaagaac
ttcaggccggtcttcaggtatttctgcatggaaagattcctggaccccgcagtgtggatg
gagaaacggctggcttacactcgcagtgtggccacctcttctatagttagctacatcgta
ggcctgggtgaccgacacatccagaatattctggttgatgagcagactgctgaactggtg
cacatcgatttaggtgtggcctttgagcaggggaagatcctccccacccccgagactgtc
ccctttagactgtccagagacattgtggacgggatgggcatcactggagtggagggggtt
ttcaggagatgttgtgagaagactatggaggtgatgaggagctctcaagaagctctactg
actattgtagaggtgctgctgtatgaccctttgttcgactggaccatgaatccattgaag
gccttctacctgcagcatgacgaacagcaggagctcaacgcaacgctcagctccaccatg
gggggagatgacatagacaaccaccgtaaatccagtgacagccagagcttcaacaaagtg
gcggagcgggtgctgctgaggctacaggagaagctaaagggggtggaggagggcacggtg
ctcagtgtgggggggcaggtcaacctgctcatccaacaagccatggaccccaaaaacctc
agcagactcttcccaggctggcaggcctgggtatag
DBGET
integrated database retrieval system
