Sander lucioperca (pikeperch): 116043916
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Entry
116043916 CDS
T07345
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116043916
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sluc01002
]
116043916
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116043916
Peptidases and inhibitors [BR:
sluc01002
]
Cysteine peptidases
Family C46: hedgehog family
116043916
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Morphogens
116043916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Vint
DHQS
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
116043916
NCBI-ProteinID:
XP_031146798
Ensembl:
ENSSLUG00000003882
LinkDB
All DBs
Position
9:23381800..23387049
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AA seq
413 aa
AA seq
DB search
MVLMRVMLSVSLCLLLTSVGSGCGPGKGYGKRRHPKKLTPLALKQFIPNVAEKTLGASGK
YEGKITRNSDRFRDLTPSYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKAHI
HCSVKAENSVAVKSGGCFPGSSIVILSDGRTKPLKELQVGDKVLAADQQGNLVPSDFLMF
MDQDQQIMREFHVLETEEPRCRLTLTAAHLVFVMSNNNSTNSSDIRAVFSSNVKIGQWLL
VVGNDRPDHLIPARVTRIRVEKYRGSYAPVTSHGTIIVDWVLASCYAVVEDHDLAHWVFV
PVRLWRSFLSLVGMVKELSSVYQTEGVHWYPELLYHVGSWVLDSSSFHPQTAL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgagagtgatgctgtcggtgtccctctgcctgctgctgacgtccgttggc
tcgggctgcggaccgggcaagggatacgggaagcggaggcaccccaagaagctgacaccg
ctggcgctgaaacagttcatccccaacgtggcggagaaaaccctgggggccagcggcaag
tacgaaggcaagatcacgcgcaactcggacaggttcagggacctgactcccagttacaac
cccgatattatttttaaggatgaggaaaacaccaacgcagaccgactcatgacacaaagg
tgtaaggacaaactgaactctttggctatttcagtcatgaatcagtggcccggggttaaa
cttcgagtcacagagggctgggatgaggatggccatcattctgaggagtccctgcactat
gagggcagagcggtggacatcaccacctcagaccgggacaagagcaagtacggcatgctg
tccaggctggctgtggaggcgggcttcgactgggtatactatgagtccaaagcccacatc
cactgctctgtgaaagcagaaaactctgtggcagttaagtctggaggttgcttccctggt
tcgtccatcgtgatcctgtcagatggaaggactaaaccattgaaggagctccaggtgggg
gacaaggtgctggccgctgaccaacaaggaaatcttgttcctagtgactttctaatgttt
atggaccaggaccagcagattatgagagagttccacgtcctggagactgaagagccacgc
tgcagactgacactgactgcagctcacctagtctttgttatgagcaacaacaacagcacc
aacagcagcgacattagggccgtgttctccagtaatgtaaaaataggacagtggcttctt
gttgttgggaatgaccgtccggaccacctcatccctgcaagagtgacaagaattcgtgtg
gagaaatatcgagggtcttatgcacccgtaacatctcacggaaccatcatagttgactgg
gttttggcatcttgctatgcggtcgttgaggatcatgaccttgcacactgggtttttgtg
ccagtccgactgtggcgctcgttcctgtccctggtcgggatggtgaaagagctcagcagt
gtgtaccaaacggagggcgtccactggtacccagagcttctctaccatgtgggaagttgg
gttctggacagcagctcttttcacccacaaacagctctttaa
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