Sander lucioperca (pikeperch): 116044088
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Entry
116044088 CDS
T07345
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65 isoform X1
KO
K12031
tripartite motif-containing protein 65
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044088 (trim65)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044088 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
Prok-RING_4
zf-rbx1
zf-RING_11
DUF4230
Motif
Other DBs
NCBI-GeneID:
116044088
NCBI-ProteinID:
XP_031146977
Ensembl:
ENSSLUG00000022108
LinkDB
All DBs
Position
22:837406..844220
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AA seq
564 aa
AA seq
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MCLSIFPTAHEGIIFASAVIREASDDIQSLFTQMLCTNVAICRSEMSALPSEMDSQNSNL
NCAICLDRFRIPVTIPCGHTFCQECINLHWDTKSKSDIGPQCPICNEKFPTRPILKRNVS
LSVLTEAVNTGPSCRESLMRGSEGARALLLCDRHKKPLVYYCRQDKMSVCCQCGISECAN
HDKVLLEAERENQELLLERKRKEVGKLTEETLKSINDLAENINQAKVTLQQTSTWVNVKF
STLIKILVEKQEATELFTEEQKEAAITEAEARLAELKERSQILQESQEQIAAVLKLSDTE
LIKESMVIEVPRFKDIPTDVTPNLQERLNGVTDVLSRVSKLVSEDLEKAVSTAVGPDKDG
SPQDKRPILAVVPSPAAPCHPGGKEGLSAYRCSLTFDPRTANGHLCLSQENRRAEHLTTG
PRPVPAHEARFDHTWQVLCFQGFKNGQHYWELEVSKPWAYLGVTYETIPRKEKGKRCMVG
MNELSWSLQLDEHQISAWHNGRRETVVGHSQHSRIGMLLDYEAGTLTYYGDGQTRLHAFH
CAFSQELFPACWIGEGVSITLCST
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttgtctattttcccgacagcacatgaaggcatcatttttgcgtctgccgtcatc
agggaagcttctgacgatattcagtcactattcacacaaatgctgtgcacgaatgtagct
atctgtcgaagtgagatgtctgctcttccttcagagatggattctcagaattcaaacctg
aactgtgccatatgcctggaccgtttccggatccctgtaaccatcccctgtggtcacacc
ttctgtcaagagtgcatcaaccttcactgggacaccaagagcaagtctgatatcggacct
cagtgtccaatctgcaatgagaagtttcctaccaggcccattctcaagcgtaacgtgtcc
ctgtcagtcttgactgaggctgtcaacaccggcccctcctgtagagagtcgcttatgagg
ggaagcgaaggggcgagagccttgctgctgtgtgatcgccataaaaagcctctggtttat
tactgcaggcaggacaaaatgtctgtgtgctgccagtgtggcatctctgaatgtgcgaac
cacgacaaggtgttgttggaggcagaaagggaaaaccaagagctgctgctggaaaggaag
agaaaggaggtggggaaactcactgaagagacgctgaaaagtataaatgacttggctgaa
aatatcaatcaagcgaaggtgactcttcagcagacttccacctgggtcaatgtcaagttc
tccaccctgattaaaatactggtggagaagcaggaggctacagagctcttcacagaggag
cagaaagaagctgccatcactgaggcggaggcacggctagctgaacttaaggagcgctcc
cagatactccaagagagccaggaacagatagcagctgtacttaagctctctgatacagag
ctcatcaaggaatcaatggtcatagaggtcccgcgtttcaaagatattcccacagatgta
acgccaaaccttcaagagcgattaaacggtgtcacagatgtcctctcccgagtctccaag
ctggtgtctgaggacctagagaaagctgtgagcaccgctgtgggtccggacaaagatggt
tctcctcaagataagaggccgatcctagctgtggttcccagtccagctgctccgtgccac
cctggtgggaaggagggcctcagtgcttaccgatgctctctgacctttgaccctcgcacg
gccaatgggcacctgtgtctgtcccaggagaaccggagggcagagcacctgaccaccggg
ccccgccccgtcccagcccatgaagcgcgcttcgatcacacctggcaggtgctctgcttt
cagggcttcaaaaatggacagcactactgggagctggaggtgtccaagccctgggcctac
ctcggggtaacctacgagaccatccccaggaaggagaagggcaaaaggtgcatggtgggt
atgaacgaactgtcctggagcctgcaactggacgagcatcagatcagcgcctggcacaac
ggccggcgggagactgtggtcggccactcccagcacagccgcatcggcatgctgctggac
tacgaggcggggacactcacctactacggagacgggcagaccaggctccacgccttccac
tgtgccttcagccaggagctgttccccgcctgctggataggagagggggtcagcatcacc
ctctgctccacatga
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integrated database retrieval system
