KEGG   Sander lucioperca (pikeperch): 116044263
Entry
116044263         CDS       T07345                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sluc03037]
    116044263 (ift140)
Cilium and associated proteins [BR:sluc03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   116044263 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_WDHD1_1st Beta-prop_EML TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_HPS5 TPR_COPA_B WDR55 WD40_Prp19 Clathrin TPR_GEMI5 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N RNase_HII tRNA_int_end_N2 Beta-prop_RSE1_2nd Consortin_N Beta-prop_ELP1_2nd TPR_12 Rax2 DUF2524
Other DBs
NCBI-GeneID: 116044263
NCBI-ProteinID: XP_031147168
Ensembl: ENSSLUG00000012473
LinkDB
Position
22:12386928..12410692
AA seq 1461 aa
MAVYFDHRIEAPESNGVPSQLTWHSALPVLAVASSSPTTGGIVDLYLQQGEYVENCHLER
PYQPTVLRWHPTKPVLALGWENGEVVLLTHPAGDQTVLPSTHAACITLLEWSSSGSRLVT
GDQTGALAVWKVDARGRLQGNHLVKHEYNKPLTCCIFRPASPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLTFYVSTVDGKVHSVDEHCKTSLLLSVEGEIKKLLYLEKREL
LAVITETMMLSQYTLGPEGGAQEVMKVKLSSKTGLNVDIIWTENGLLITATGEQVIRLWD
LDGDDNYVLPLDETLGFEKGEMMNCVSYCAGKEILAAGTSHGRIAMWKMVVQPGGSRGDT
KAQWKLQTPTEIEGNVIQLQWGSSLNLLAANNSNTVLILSEHVMSAHFSQQVAAVQLTPT
QLSITQFTTGAHLTLQSDIHIKGVCVTNDSVTVWSGKQVTVYELSGTVLRNTGSFPCDSH
IVAVHFENLYTVEPNRVQIRTPQGTVKQLLTFSKSEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLADQIANLGALRSVKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFVGRPSSGILQREESEKHQFQGTELSSRCPVFHFWDESEPRLFVCETVPIS
SESASTSFLDAVDVLVVTLFCTQEHGLLLHDCYPKSSGLQALLALDVPYYYFSCKLLFRR
GGVFLPEPGERDSGSAEILAPTSAPPQQTQPLRGSAAQFPHMVSRRALRDFVGLENCEKA
TRDAMVNFSFYLTIGDMDEAFKSIKLIKSKAVWENMARMCVKTRRLDVARVCLGNMGNAR
AAKALKEAEAEPEPEAQVAMLAIQLGMLDDAEKLYKCCQRYDLLNNFYQASGQWQQALET
AENHDRIHLRTTYYNYAKYLESTGDKTLALTYYEHSDTHRVEVPRMLQDDTSSLEIYVNK
MKDKNIYKWWAQYLESQSDMDSALRFYECAQDYLSLVRVHCYMGNIQKASEIANDTGDRA
ASYHLARHYEGHDDIKQAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNAEDMMEAA
CYYEEKGTHMDRAVALFHKAGYVSKALELAFATQQFSALQLIAEDLNEYSDPALLARCSD
FFITHSQYEKAVELLVAAKKYHQALELCVTQSLTITEELAERMTVTDSKDLSEEARKELL
ERIADCCMRQGNYHLATKKYTQAGNKPKAMRALLKSGDTEKIVFFANVCRQKELFIMAAN
YLQSLDWRKNPEILKTIIGFYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAFK
CLSKAKDSSTGQQEVRLADLQHRVTLIKKFVHARRLYTEDADEAVRLCEALLEEPELDPA
VRIGDAFGFLVEHHCQQGNFQVAYRKLEELQRILPSQNVRYYVSQASLESLQKEMGVHMG
RGDSRQGVKEEDEVEEDINVS
NT seq 4386 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgtattgaggcccctgaaagcaatggtgtgccctctcag
ttgacctggcactcagctcttcctgtactggctgtggcctcaagcagccccaccactggc
ggaattgtagatctctacctgcagcagggagagtatgtggagaactgccatttagaacgt
ccttaccagcccacagtgctgcgctggcatcccacaaagccagtgttggcactaggctgg
gagaatggagaggtagtgctgctgacacaccctgctggagatcaaacagtccttccaagc
acacatgcagcctgcatcacactgctggagtggagtagctctggcagccgcttggttact
ggtgatcagactggagcgctagcagtatggaaggtagatgctcgtgggagacttcaagga
aaccatcttgtgaagcatgaatacaacaaacctctaacttgctgcatcttcagaccggcc
tcgcctggggacgatgtagcaatgctagcccgagcatcagttagtggtgatgagagtgct
ctggacatgttcagctggaagggagcacctctcaagatgggcccacaggagggactcaca
ttctacgtcagcactgtagatggtaaggtccacagtgtggatgagcattgtaagacaagc
ctacttctcagtgtggagggcgaaatcaagaaactgctctacctcgagaaaagagagttg
cttgctgtgatcacagagaccatgatgttgtcacagtacactcttggacctgagggagga
gcccaggaagttatgaaggttaagttgagcagcaagactgggctgaatgtagacattatc
tggacagagaatggcctcctcatcacagcgacaggggaacaggttatcaggctgtgggac
ctcgacggagatgacaactatgttttacctctcgacgagactctggggtttgagaaagga
gagatgatgaactgtgtctcatactgtgctggaaaagaaatcttggcagctggtaccagc
catgggcgcatagcaatgtggaagatggtggtgcagccaggcggcagcagaggggatacc
aaggcccagtggaagctacagacgcccacagaaatagaaggaaatgtcattcagctacag
tggggctcgagtctgaatctgctagcggccaacaattcgaacacggtgctgatcctgagt
gagcatgtgatgtcggcccacttcagccagcaggtggcagcagtgcagctcaccccaacc
cagctcagcatcactcagttcaccacaggagcgcacctgactctgcagtctgacatacac
atcaagggagtttgtgttactaatgattctgtgacagtctggagtggcaagcaggtcact
gtatatgagctttcggggacagttcttcgcaatacaggatcgtttccttgtgactcccat
atcgtagctgtacattttgagaacctctacactgtggaacctaacagggtccagattcgc
acgccacagggcacagtgaagcagctgctgaccttctccaagtcagagggcaaccctgta
ctactcagtgtgtgtcagtcttacctggtggttggcacagacacagcacacattagagtc
tttgacctctcccgaagagatgccaaagctcactgcagtgctaagaacctggctgaccag
attgctaatctgggagccctgaggtcggtcaaatgtaatgccaacggcagccaagtcagc
atcctaatctctcaggttaacgggcgaccggatcacaaagtttacttttatgacgtcgag
atggacacggtgacacactttgacttctttgttggcagaccgtccagtggtatcttacag
cgagaagaaagtgaaaagcatcagtttcaggggacagagctcagcagtcgctgccctgta
tttcacttctgggatgagagtgaacctcgtctttttgtctgtgagacggtgccgatcagc
tctgaatccgcatcaactagtttcttggatgcggtggacgtgttggtagtgacactcttc
tgtacgcaggagcatgggctcctcctacacgactgctacccaaaatcttcaggcctgcag
gcgctcctcgctctggatgtgccctactattatttcagctgcaagctattatttcggagg
gggggtgtctttttaccagaacccggtgagagagactcagggtcagcagagattttggca
ccaacatcagcacctccacagcagactcagccattgaggggttcagctgcccagttcccc
catatggtgtccaggcgagctctcagagactttgtggggctggagaactgtgagaaggcc
acccgtgacgccatggtcaacttcagcttctacctgaccattggcgatatggacgaagcc
ttcaagtctatcaagctcatcaagagtaaagcggtatgggaaaacatggcacggatgtgt
gtgaaaacccgccggctggatgtggcgcgtgtgtgccttgggaatatgggaaatgccagg
gcagcaaaagccctgaaggaggccgaggctgagcctgaaccagaagcccaagtggctatg
ttggccattcagctcggcatgctggatgatgcagaaaagttgtacaagtgctgtcagcgt
tatgacctgctgaacaatttctaccaggcttctggccaatggcagcaagctttggaaaca
gcagagaatcatgatcgcatccatctgcgcaccacctactacaattatgccaaatatctg
gagtccactggcgacaagaccctggccctcacatattatgagcattcagacacacacagg
gtcgaagtgcccagaatgctccaggatgacacgtcgtctctagagatctacgttaacaaa
atgaaagacaagaacatctataagtggtgggcccagtacctggaaagccagtcagacatg
gattcagcgctgcgtttttacgaatgtgcccaggattatctctccctggttcgagtccac
tgctacatggggaacattcagaaggcatctgagatagccaatgacacaggtgacagggca
gcgtcataccacctggccagacactatgagggccatgatgatatcaaacaggctgtccac
ttctacacacgagcccaggcctacaacaatgccatacgactttgtaaggagaatggtctg
gatgaccagctgatgaacctggctctactgagtaatgctgaggacatgatggaggctgcc
tgttactacgaggagaaaggcacccacatggaccgagctgtcgcactgttccacaaggct
ggttacgtctccaaagctctagagttggcctttgccacccagcagttttctgcacttcag
ctgattgctgaggatctgaatgagtactctgacccagccctactggcccgctgctctgac
ttctttatcacgcattcccagtatgagaaggctgtggagttactggtagcagccaagaag
taccatcaagccttggagttgtgtgtgacccagagcttaaccatcacagaggagctggca
gagagaatgaccgtaactgattcaaaagacttgtctgaagaggcccgaaaggagctgctg
gagaggatagcggactgctgcatgcgtcagggcaattaccacctggccaccaagaaatac
acacaggcgggcaacaagcccaaggccatgagggccctgctaaagtcaggcgacacagag
aaaatagtattcttcgccaatgtttgtcgtcagaaggagcttttcatcatggccgccaac
tacctccagtctctggactggcggaaaaatccagagatcttgaagacaatcattggtttc
tacactaaaggcagggcaccggacctgctggctggcttttatgaagcctgtgctcaggtt
gagattgatgattaccagaactatgaaaaggctctagatgctttgactgaggcgttcaag
tgcctctcaaaagcaaaggactcttcaactggacaacaggaagtaagactggctgacctg
cagcatagagtcacgctaatcaagaagtttgtccacgcacgcaggttgtatacggaggat
gctgatgaggcggtgcggttatgtgaagctctgctggaggagccggagttggaccctgct
gtcaggattggagatgcatttggtttcctggtggagcaccactgtcagcaaggcaacttc
caagtggcctaccgtaagctggaggagctccaaaggattttgccgtcacagaacgtcagg
tactatgttagccaagccagcctagagtccctgcaaaaagagatgggtgtacacatgggt
cgtggtgacagcaggcaaggtgtgaaggaggaggacgaagtggaggaggacataaatgta
tcttaa

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