Sander lucioperca (pikeperch): 116044392
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Entry
116044392 CDS
T07345
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sluc01002
]
116044392
Peptidases and inhibitors [BR:
sluc01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116044392
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
116044392
NCBI-ProteinID:
XP_031147367
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Position
24:complement(13667888..13699371)
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AA seq
1236 aa
AA seq
DB search
MQQWEVMVPSLHWLLLLWGLQGLWAQDYEEDYEEEVVTTKKKSRLNPSNSIPQNGKSLID
EDCSLELAFLIDSSESAKDNHALEKRFASDVMDRLQSLRLQTGRGLSSRAALLQYSSHVI
IEQTFKQWRGIADFKARLAPIAYIGHGTYTTFAITNLTRIYLEESDPSSIKVAVLLFDGI
SHPRNPDIFSAVADAKNQGIRFFTIGITPEANEPANIAQLRLIASSPASRYLHNLQDRGI
VDTFMKEITALADEGCPLAQSKCACDKGERGASGPPGKKGRPGEDGSPGTKGQKGEGGLS
GLPGREGSEGKPGYKGEKGERGECGTPGIKGDRGPEGTIGPRGNRGLQGSLGPPGDVGPE
GAMGKKGERGLPGPPGIQGETGIGLPGPKGDVGYPGQSGPPGPPGLGEPGPLGPQGPQGV
QGERGQIGEGLPGPKGERGLAGPQGPRGQPGAGIRGDKGDIGPPGFPGPLGLPGAGIQGE
KGMEGPRGPPGSRGPQGEGLPGAKGDQGLPGEVGAPGERGAGDPGAKGEPGSTGMSGLPG
LPGEDGAPGQKGEPGPVGLRGSEGAPGIGIQGEKGDQGQRGIRGLTGPPGIAGPSGPKGE
PGAQGRGGSPGPPGRFVAGPKGDLGPSGPPGPIGETGYGLPGPKGDRGDSGPAGPFGPKG
DGYPGPVGPPGLPGLPGEPGQEGVGIPGPKGDVGFRGLPGLPGPPGEGLQGPLGNPGRPG
PPGPTGPQGQGVQGPKGEQGAQGVTGPRGVPGEGLHGAKGDRGSAGERGLKGIKGDLGDP
GTPGEPGRPGVKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEI
IKDFVNALVDRVTVGRNATRIGLVLYSLEVKLVFNLARYVTKQDIKQAIRNIPYMGEGTY
TGTAIRKATQEAFFSSRLGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIV
NTTDPTQAEFMRELNLIASDPDSEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRII
NGYNGYGNNGYNSHNGNRNGNNGNYAIGGYGYRPVTEQQVLNGRQTGINTGASTPSHGGR
VETTQHGSRGSSTGHGGGGQHVFTETHLGTERGDTFNRNTSDIRPPAKEDSSSTRGSSSS
SSSSSTRITTSSSGVSVQLVPALRPALPKETVPLDPRCGLVLDQGTCRDYNIRWYYDKQA
NACAQFWYGGCNGNKNRFDTEGECKRTCVIARTTGG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtgggaagtcatggtcccctcactgcactggcttctgctactgtggggactt
cagggtctttgggcacaggactatgaagaagactatgaggaagaggtggtgaccaccaag
aagaagagcagactaaatccatccaattccataccgcaaaatggcaaatcactaattgat
gaagattgcagtttggagttagccttcctgatcgacagctcagagagcgccaaggacaac
catgcactggagaagcgcttcgcctcagacgtgatggaccggctgcagagcctgcggctg
cagaccggccggggcctcagctcccgggctgccctcctgcagtacagcagccatgtcatc
atcgagcagaccttcaaacagtggaggggcattgccgacttcaaggcccgactcgctccc
atcgcgtacatcggtcacggcacctacaccaccttcgccatcaccaacctcacccgtatt
tacctggaggagtcggatcccagcagcatcaaggtggccgttctgctcttcgacggcatc
tcgcaccccaggaacccagacatcttttcagccgtggccgatgccaagaaccagggcatc
cgcttcttcaccataggcatcacacctgaagccaacgagcccgccaatatagctcagctg
cggctaattgctagctccccagcctcacgctaccttcacaacctgcaggaccgaggcatt
gtggatacatttatgaaggagattacggcgctagcagatgaagggtgtcctctggcccag
agcaagtgtgcgtgtgacaagggtgagaggggagccagcggccctcctggaaagaagggc
cgtcctggagaagatggaagccccggcacaaaaggacagaagggtgagggtgggctcagt
ggacttccgggtcgggaaggatcagagggaaaacctggatacaaaggagagaagggagag
agaggggagtgtggcacacctggaattaagggagacagaggtcctgaaggtacaattggc
ccaagaggaaatcgtggacttcagggttctcttggtccacctggcgatgtcggacctgaa
ggtgcaatgggtaaaaaaggggaaaggggacttcctgggccacctggaatccaaggagaa
acagggattggccttccgggacccaagggggatgtcggttacccggggcaatcagggcct
cctggtcctccaggacttggtgagcctggaccattggggcctcaagggccacagggagtc
caaggagagagaggacagataggagaaggtctccctggaccaaagggagagcgaggcttg
gcggggccgcaggggcccagaggacagccgggcgctggaatcagaggagacaagggggat
attggccctccaggttttccagggcccctcggcctcccaggagcaggcatacagggcgag
aagggcatggaaggaccaagggggccaccgggtagcagaggcccacaaggagagggcttg
cctggagccaagggggaccaaggtttgccaggcgaggtgggcgccccaggagagagaggg
gcgggggaccctggagcaaagggtgagccaggatcaacaggaatgtctggtttgccgggc
ctgccaggggaggacggagcccctggacagaagggtgagccaggccctgtaggtctcagg
gggtccgagggggcacctggaattggcatccagggtgaaaagggcgaccaaggccaaaga
ggaataaggggcttgactggtccacctggcattgctggaccctcaggaccaaagggagaa
ccaggggcacaaggcagggggggttcccctggtcctccgggtcgtttcgtcgccgggccc
aagggtgatcttggcccaagtggtcctcctggtccgataggggagactggctacggactt
cctggtccaaagggggaccgtggggattcaggccctgcaggtccattcggtcccaaagga
gacggctatcccggccctgtgggccctcctggtctgcctggacttccaggagaacccggc
caggaaggagtgggcatccctggaccaaagggagatgttggtttccgagggttgcctggt
ttaccaggacctccgggcgaaggcctccaaggacctctgggtaaccctgggcggccaggc
cctccggggccaacagggccacaaggacaaggagttcaaggaccaaagggtgaacagggg
gcccagggagtgacagggccaaggggggtacctggtgaaggtttacacggagctaaaggt
gaccgtggctcggcaggggagagggggctgaagggaatcaaaggagatttgggagatcct
ggaaccccgggggaacctggccgacctggtgtcaaaggtgaagcaggcctcactagagag
gacatcattcggatgatcaaagagatctgtggatgtgggatcaagtgtaaggagaggccc
atggaactggtgtttgtcatcgacagctcggagagcgtgggcccagagaactttgagata
atcaaggattttgttaacgcgctggtggaccgagtcacggtgggccgcaacgccaccagg
atcggcctggtgctgtacagcctggaggtgaagctggtgttcaacttggcccgctacgtc
accaaacaggacatcaagcaggccatcaggaacatcccatatatgggagagggcacctac
accggcaccgccatccgtaaagccacccaggaggccttcttcagttcacgtttgggagtc
agcaaagtggccatcgtgattactgacgggcagacggacaagcgagagccagtgaagctg
gatattgctgtacgagaagcacatgctgccaatattgagatgtttgctctggggattgtg
aacaccaccgacccaacacaggctgagttcatgagagagctgaatctgatcgcctctgac
ccagacagcgagcacatgttcctcattgatgacttcaacaccctgccagcgctggaatcc
aaattggtcagccagttctgtgaggacgagaatggagccctgatatataacagaataatt
aacggctataacggctatggaaacaatggctacaacagccacaacggcaacaggaatggc
aacaatgggaactatgccatcggtggttatggataccggcctgtgactgagcagcaggta
ctgaatggccgtcagaccggcatcaacactggggccagcactccgagccatggaggccgg
gtagagaccacccagcatggcagcagaggatccagcacaggacatggaggaggagggcaa
catgtgttcactgagacacacttgggaactgagcgtggggacacatttaaccgcaacaca
tcagacatcagacctcctgccaaagaggactcctccagtaccagaggttcctcatcttca
tcatcatcttcttcgacaagaataaccacatcctcctcaggtgtatctgtacagcttgtg
cctgcactaaggccagctcttcccaaagagactgtacccctggaccctcgctgtggcctg
gttctggaccagggcacgtgtcgggactataacatccgctggtactatgataagcaggcc
aacgcctgcgcacagttctggtatggaggctgtaacggcaacaagaaccgctttgacaca
gagggggagtgcaagaggacgtgtgtgatcgccagaaccaccggaggctga
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