Sander lucioperca (pikeperch): 116044519
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Entry
116044519 CDS
T07345
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116044519 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116044519 (bcor)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
116044519 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
116044519
NCBI-ProteinID:
XP_031147680
LinkDB
All DBs
Position
8:16456249..16494952
Genome browser
AA seq
1830 aa
AA seq
DB search
MVDARLTPLAAMGLDRGTLMHDGLRLHGGVVYPGIRALPVDKSREMPSLTYNRDGLPELI
YKPDGPLDSRKPTNGYLGLYKSTPPGLHKPVLVPGAEGLGLERRVGPGEKASELGLAGAG
GSYLRLPWLSPYPEASMYSFMDTSKYAALNMYKASLLSQPNPYLPQHLAYPSLCAAQGSN
VNPAAASAAERLYYMPPYPPPPPISSPLVAPPMRIPAVTVAPTALVHCQDKGLGVAPQFA
QQLHQPSPHSQHHQAAIDRDRSPNRSSRPSRPPSRKGSSSSNNNNNTSSNSTSGTSTGNN
NNLPTDSSPHASSRLPQPPPPPANIENLLDLQRPVARIGHPPTSSSSTSSISSSSSSTQS
ISHPFSVSSMASEQPSPARPSPHKSRPRDGALEHRSVGVERRPSRSPSKPNFERPAHQPQ
ATKDSAEKPLDLSGRMLEFGLPPNGFPVKMDTIASGPRYGLPSSRELLKENLPHSPSSHL
HSVVSSTSSKVPERPEMISTLHSSWVVPSPSPSRTQHTPGLPPSPRPNTDLGLSQAKGSS
PSVIKHKGLERVLPQQRSSSCPRIGEPNHNVSSTQHPSLVSSRALSPKPNGEWVKHSPSH
SEHPGHHREGTEKSSQTTKRGETTPEVSSYKRPCLENGHPPGHLYLPQSDAYLNHSLAYA
NRYLHYPIPDGMALHSLPIAGKGPVYPHPVLLGSNSLYPTHLAAKHPLPYHNLPAGPGGE
YLTYNSQEMAHPLMQTHSDKLAERGDATLKPRGQEKSRGTVEECGGHRDHNIGKEIGEGS
QIKSDREAGAQGQGGNQSRTPSSSVASREKIVCIDLVHSDTDIESTPTVHKPAAEASSKV
NQNECCHRNQNLTKTDYEPKHQHHLSHPYPIHSGHSPALKPNHTDRKPEAPFGKPKVLQD
KGCPGVTSSTSPTSLGKFAQAEESLEEQSPNPDPEDQDQSTLRCARTSGERSSGKDKGDR
DCRALHFSQHCTDVVKEERVCEGETEKEDSIVDLGESQGEGDEDDEEDGLTSSKGCRRSS
LAKRIANSSGYVGDRFKCVTTELYADSSKLSREQRALQMEVISREGSNISQPAANWERAM
MRFSELELKEKEGGGVCVSASAAGRELADGQRRERVLEHCQHTTRQGEREGVRPVYANNR
VPVLQRCGGLNEPLSPGHGAREGAIGASQGGLNDGARKVKRESEGGHCLPPTLTAAKGYL
EEKASSGFGPTRKRQLSLKAEKQNTEWEEGERLSHPEKRAKISTDEREQASPDEDDDDEV
RKLKVCIELKGLRLSKPAAGAASPDGSLIKQERAWPQPRLVAPVQSLRERKIRPGEPEDR
AAAHRAEINRKWGCEKLLNGVAASPLPPGQLKDRALPSGPFSGDRGLKEPRRAPPSLAPE
PSMGAPPPIKPRRHSDTDKPKGKRPCKTKHTSQREREREKRKEAAANSPGQRCVADQGAA
EDDKLSEQRGAPRKGAASPNHYPYSPVKPCSPATLCPPSLQPQANSRAGSVPPELAGVHR
TPPAEPPAVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENRVCEVNHRDYAG
YCALHEACARGWLSIVQHLLDYGADINCSAQDGTRPIHDAVENDHLDVVRVLLSYGADPT
LATYSGRGLLKMTHSDSMERFLTDYFADLQGRSDDDPGLYWEFYGSAVCELSEEGGVYDI
LANPPGPEDEDEDDKREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSGR
GFRQAFPHMEVVTVAEAEFYRQASLSQLFSCPEELEGFHADSKDLLDLVEDSAELAALLG
STLECLDDRWDHPGDKLKDKIKAIGKLGSS
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgcccctggcagcgatggggctggaccgaggcactctgatg
catgatggtcttcgtctccatggtggggttgtatacccaggcatcagggcactaccagtg
gataagagccgagagatgccctccctcacttataacagggatggtctcccagagctcatc
tataagcctgatggccctctggacagccgtaagcctacgaatggatacctgggcctctac
aagagcactcctccaggtctccacaagcctgtgctggttcctggagctgaaggtctaggc
ttggaacgcagagtcgggcctggagaaaaggcatctgaactgggcttggcaggtgctggt
ggcagctacctccgcctgccgtggctcagcccctaccctgaagcgagcatgtattccttc
atggacacatccaagtatgcggctctaaacatgtacaaagcctccttgctcagccaaccc
aacccatatcttccgcagcacctggcctacccttctctgtgtgcagcccaggggagcaat
gttaaccctgctgctgcttctgctgctgagaggctctactatatgcccccctatcctcct
cctcctcccatctcttctcccctggttgcgccccctatgaggattcctgcagtcacagtg
gcccccacagcactggtacactgccaggacaaggggcttggtgttgcgcctcagtttgca
cagcagcttcaccaaccttcccctcattctcagcaccatcaggctgctatagacagggac
cggtccccgaacaggagcagcagaccaagcagacctccctctaggaagggctctagcagc
agcaacaacaacaacaataccagtagcaatagcactagtggcaccagcactgggaataat
aataatctgcctactgattcttcacctcatgcatcttctcgcctcccccaacccccccct
cctcctgctaacattgaaaatttacttgatttacaaaggccagttgctaggataggacac
ccacccacttcctcctcctccacttcttcaatatcttcctcatcctcatccacgcagtcc
atttctcatccattctctgtaagcagcatggcatcagagcagccctctccagcccggccc
agcccccacaaatctaggccaagagatggggcacttgagcacagaagcgtaggggttgaa
aggagacctagcaggtcaccctccaaacccaattttgaaagaccagctcaccaaccccaa
gcaaccaaagactcagcagagaagcccttggatttgtctggaagaatgctggaatttggg
ttgccccctaatggattcccagttaagatggacactatagcatcaggcccacgttatgga
ctgccctctagccgagagctactaaaggaaaacctgccccactctccatcctcccacttg
cactctgtggtcagcagcacttcttcaaaggtcccagagaggccggaaatgatcagcact
ttacactcctcctgggttgtacctagcccgtctccttcccgtacacagcacacaccaggc
ttgcccccctccccaaggcctaacacagacctgggcctttcacaagccaaaggctcctca
ccctctgtcatcaaacataaaggtctggagagagtactccctcagcaacgtagctcatcg
tgtccaaggataggggagcccaaccataatgtttcctcaactcagcacccctctctggtc
agctccagggctctttctcccaaacccaatggggagtgggtcaaacacagccctagccat
tcagaacatccgggccaccacagagagggaacagagaaatcctcccagaccactaagaga
ggtgaaacgactccagaggtgtcctcatacaagaggccatgtttagagaatggtcaccct
cctggccacctttaccttcctcaaagtgacgcttacctgaaccacagtttggcctatgcc
aatagatacctgcactaccctatccctgatggcatggcgctacactccctgccaattgca
gggaaaggcccagtctaccctcacccagtattactgggcagcaacagcctttacccaacc
cacttggcagcaaaacaccctttaccctaccataacttgccagctggtccaggaggggaa
tacctcacttataactcacaggagatggcccatcccctgatgcagactcactcagacaag
ctggcagaaagaggagatgctactttgaagccccggggacaggagaaatcccggggaact
gttgaagaatgtggtggccacagagatcacaacattgggaaagagataggcgaaggaagc
caaattaagtctgatagggaagcaggagcacaaggacaaggtggcaatcaaagcagaact
ccttcttcctctgtagcgtccagagaaaagattgtctgcattgaccttgtacactcagac
acagatattgagtctaccccaacagtccacaaacccgctgctgaggccagcagcaaggtt
aaccaaaatgaatgttgtcataggaaccaaaatctgacaaagactgactacgagccaaaa
caccaacaccacctttcccatccttatccgatccactccggacacagccccgccctgaag
cccaatcacactgatagaaagccagaagctccctttgggaaaccaaaggttctccaggac
aagggctgtcctggggtgacatctagcacatccccaacatctctagggaagttcgcccaa
gcagaggaaagcctggaggaacagagccccaacccagaccctgaagatcaagaccagagc
accttgcgctgtgcccgcacatctggggaacgcagctctggcaaggacaaaggggacaga
gactgcagagctcttcacttctctcagcactgcacagatgtggtgaaggaggagagagtg
tgtgagggagagactgaaaaggaagacagtattgttgacctaggggagtctcaaggagaa
ggggatgaggatgatgaagaggatggcctgacttcatctaaaggctgtcgtagatccagt
ctggccaagaggatcgctaactcctcaggctacgttggcgaccgctttaaatgtgtcacc
actgagctgtatgctgactccagcaagctgagccgtgaacagagagccctgcagatggaa
gtcatatcacgagaggggagtaatataagtcaacctgcagctaactgggagcgggcaatg
atgcggttctcggagctggagctgaaggagaaggagggcggcggtgtgtgtgtgtctgcc
tcggcagcaggacgggagctggcagacggccagcgcagagagcgagtgctggaacactgc
caacacaccaccaggcagggagagagggagggtgtccggccagtgtacgcaaacaacaga
gttccagtccttcagaggtgtgggggcctgaatgagcctttgtccccagggcacggggct
cgagagggggccataggtgccagccaaggagggctaaatgacggagccaggaaggtgaag
agggagtcagaaggaggtcattgtctaccccccactttgacagcggcaaaaggatacctt
gaggagaaggccagctctggctttggacccaccaggaaacgccagctcagcctcaaggct
gaaaagcagaacacagagtgggaggaaggagagaggctgtcccacccagagaaaagagca
aagatttctacagatgagcgtgagcaggccagtcctgatgaagatgacgacgacgaggtt
cggaagctcaaggtctgcatcgagctgaagggactgcgactcagcaagcccgctgccggc
gcagcttcccctgacgggtccctaatcaaacaggagagagcatggccccagccccgatta
gtagccccggtccagagcctacgggaacgcaagattaggcctggtgagccagaggaccga
gccgcagcgcatagagccgagatcaacaggaaatggggctgtgagaagcttcttaatgga
gtagctgcttctccccttccccccggccaactgaaggacagagcgctaccgtcgggcccc
ttctcaggtgaccgtggcctcaaggagcccagaagggcccccccatctctggccccagag
ccgtccatgggagccccccctcccatcaagccccgtcgccatagtgacacagacaaaccc
aagggcaagcggccgtgcaagaccaaacacaccagtcagagggagcgagagcgggagaaa
aggaaagaggccgcagctaacagcccaggccagcgttgtgtggctgatcagggagcagct
gaagatgacaagctgagtgagcagcgtggcgctccgaggaagggagccgcctctcctaat
cattatccctactctccagtcaagccctgctcccccgccacactctgtccgccctccctg
cagccccaggctaacagcagagctggcagtgtgccaccagagctggcgggggtgcacagg
accccccctgctgagccccccgctgttcgtccgatcccgccagaggctcgtcggctgatc
gtgaacaagaacgccggagagactctgctccagagagctgcacggctgggctacgaggag
gtggtactgtactgtctggagaacagagtatgtgaggtgaatcacagagactatgccggt
tactgtgctctccacgaggcatgcgcacgtggctggctcagcatagtccaacacctgctg
gattatggggccgacatcaactgcagtgcacaggacggcaccagaccgattcacgatgct
gtggagaatgaccacctggacgttgtgcgagtcctgctgtcttatggtgctgaccccacc
ctggccacatattctggccgtggcctgctcaagatgacccacagcgacagcatggagcgc
ttcctcactgattattttgctgaccttcagggccgctcagatgacgacccggggctttat
tgggaattctatggcagcgctgtgtgtgagttgagcgaggagggcggtgtctatgacatc
ctggccaaccctccgggcccagaggatgaggatgaggatgataaaagggaggtgtttgag
tttgagttctctgaccgccctctgctgccttgctacaacatccaggtgtccctctcccag
gggccaagaaactggctgctactgtccgacgtgcttcgtcgcctgcggatgtctggtcgc
ggtttccgacaggctttcccccacatggaggtggtgacagtggcagaggcagagttttac
cggcaggcctctctgtcgcagctcttctcctgcccagaggagctggaaggcttccatgca
gacagtaaggacctgttggacctggtggaagacagcgctgagctggctgctcttctgggc
tccacactggagtgtcttgacgaccgctgggaccacccaggggacaaactgaaggacaaa
atcaaggctattgggaagttgggctcatcctga
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