Sander lucioperca (pikeperch): 116044553
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Entry
116044553 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116044553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044553
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116044553
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044553
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
TRIM_CC
PRY
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
F36G3_coil
NDNF
Motif
Other DBs
NCBI-GeneID:
116044553
NCBI-ProteinID:
XP_031147695
Ensembl:
ENSSLUG00000025533
UniProt:
A0A8D0DEP9
LinkDB
All DBs
Position
24:10724980..10783645
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQQASSSAGVPLPLPLPAPHSGPNSPGEEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDILIDIIQQRRQ
IIGNKIKEGKAQRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKCINER
VSMATASTQVLIPEIHLSDTFDTVALDFTREKKLLENLDYLTAPSAPSIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QERFCSQNSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFAQPVC
PVFNVWNKCLTILTGLPIPDHLEGLEPDN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatttgcctggagctctttgaagacccg
ctgctgctcccctgcgctcacagcctgtgcttcggctgcgcccatcgcatcctcatctcc
cactgtgccaccaacgaatctgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatttccctgagtccggagcgtggactcgaaggacttaagagaaacgtgaccttg
cagaacattattgatagagttcagcaggcctcatcgtcagctggggtccctctaccactg
ccgttgcctgcaccccacagcgggcccaactctcccggcgaggaagggagcaaccggttg
gcgctggtcccagtaagcgccgccatgtccagcccaggcacgcctcctgaaccagtccag
tgtcagttctgcgagcaggacccaccacaggatgctgtgaagacgtgtgtgacgtgcgag
gtgtcgtactgcgaggagtgcctccgagcgacgcacccaaacaagaagccgttcaccggc
caccggctcatcgagcccatgccagactcccacctcagggggctccagtgtctggagcat
gacgaggagaaggtgaacatgtactgtgtcactgatgatcagttgatctgctcactgtgc
aaactggtcggaaggcacagagaccaccaggtggcagcactgagtgaccgctatgaaaaa
ctcaagcaagccctggactccaacctgagtaatttgatcaagaggaacaacgagctggag
tctcttatggggaaactgatccagacttgtcaacatgtagaggtgaatgcgtcccgtcag
gagggcaagctcctggaggagtgtgatatcctgattgacattattcagcagaggaggcag
atcattggcaacaagatcaaggaggggaaggcacaaaggattcgaaagcttgcccaacag
atctccaactgcaagcagtgcatcgagaggtcctccgccctcatcacgcaggccgatcag
acactgaaggaaaccgatcacgctcgcttcctgcagactgccaaatgcatcaacgagagg
gtttccatggcaactgcatcaacccaagtgctgatccctgagatacacctatcggacacc
ttcgacactgttgccctggacttcaccagagagaagaagttgctggagaatctggattac
cttactgcgccgagtgctccgtccataagggaagagttgtgcacagcttcttacgacacc
atctctgttcactggacgtctgatgatgagttcacagtggtttcctatgagctacagtat
gctatcttcactggacagtctaacattgccagtctgtgtaactcattagagagctggatg
attgtacccaacatcaagcagaaccactacacggtgcacggtctgcagagcggcaccaag
tatatttttgttgtcaaggccattaaccaagcgggaagcaggagcagtgaaccggggact
ctgaagaccaacagccagccgttcaagctggatccgaaatctgcccacaagaagctcaag
gtgtcccacgacaacctgacagtggagcgggacgaaaccacgtccaagaaaggccacagc
caggagcgtttctgcagccagaacagctatggcgtggtggggaatgtctacatcgacagt
ggccgtcactactgggaggctttaattggggggagcacatggtacgctgtgggcatagcc
tacaaatcagcccccaagcacgagtggatcggcaagaactcggcctcctgggtgctctgc
cgctgcaacaactcctgggtggttcgccacaacagcaaagagctggccatcgagccctcg
ccccatctgcgacgcgtcggagtcctgttagactacgacgccggttacgtgaccttctac
gacgccgtgggctcgcaacacctgcacacattccacgtgtccttcgcccagcccgtgtgt
cccgtgttcaacgtgtggaataagtgtctgacgattctcaccggtctacccatccctgac
catctagagggactggagcctgacaactga
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