Sander lucioperca (pikeperch): 116044573
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Entry
116044573 CDS
T07345
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116044573 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116044573 (trim25l)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116044573 (trim25l)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116044573 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
DUF948
Hydantoinase_B
DUF6746
Exonuc_VII_L
CorA
U-box
ORC3_N
zf-RING_6
UPF0242
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
116044573
NCBI-ProteinID:
XP_031147740
LinkDB
All DBs
Position
24:complement(13067321..13073878)
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AA seq
821 aa
AA seq
DB search
MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKDDPKGVYSCPQCRQSFS
PKPSLSRNTMLAEAVEQLRKGARTADVRESMRSARGVAAASSSRSKGKLSSLAVPCDMCK
GKGEERAAVKSCLMCMSSFCETHLKPHQTKKALNQHELIAPTANLAEKICTQHKYLQEFF
CRQCKVFVCWLCTSNQHKGHECVSTKAERLEKQKVMSEMYAENQQKLKDREQELKDMKKM
MDVTKRSLDRVHEDTEQVLSELQRSVERLQELLEEVLHQASQEKMGHAQEVANSLQAEIK
ELKKRDMEMKDLALCEDHIHYLETYESMCHPLESGDLPPVLVNLEATFEPAREAILDLRD
RVEDLCNQELSKITKQVNDTTLFTLRDSNRSAGQKGGIFKLFSGLGSRNTNSRSPATPPS
ISVGARSTDRRGLGIGLKSQDVRSRDTPRVDRGNTNSPRLRDRQRGEERETVRETNSRPS
PSPSPTPSRRESPSLWSRSSQSQAVPAAAPTPTPLPATPTPAPTPAPAPASTGGSSFSRM
ASISSLFRSHRRGTKQATPASPANDTLSPGGTPWGMAALPETPTEINPGLFLDSPTPGIM
DNAPAFPALREINLDSIQAPEPRTREEFLQYSVTLTLDSNTAHRRLALSDGNTKATLQVA
AQPYPDTPQRFDGWTQVMCQSPLYAQRSYWEVEWRGRGSSMGVVYGALNRKGSDARSGLG
YNAQSWTLELSDTCCSAMHDNEKKDIPVTYSPRLGIYLDLSTGTLAFYSVAESMTHLHTF
RANFTQPLYAAFGVGSGVGVGLDFALGQFSSSSDSIKICPM
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaactgtggacagaggagcagtttaactgccctgtgtgtctggatctccca
aatgatccagtcaccatcccgtgtgggcacagctactgcatggcctgcatcaaggactac
tggagcaaggacgaccccaagggggtctacagctgcccccaatgccgccagagcttcagc
cccaagccctccctgtccaggaacaccatgctggcggaggctgtagagcagctccgcaaa
ggcgcccgcacagctgacgttcgtgagtccatgcgaagcgcccgaggggtcgccgccgcc
tcctcatccagatccaaagggaagctctcctccttagcagtgccgtgcgacatgtgcaaa
ggcaaaggagaagagcgagcggcggtcaagagctgcctgatgtgcatgagctcattctgc
gaaacgcacctgaagccccaccagaccaagaaggccctgaatcagcatgagctgatcgca
cccacggccaatctggctgagaagatctgcacccagcacaagtacctgcaggagttcttc
tgtcgccagtgtaaggtgttcgtctgctggctgtgcaccagcaaccagcacaaaggccac
gagtgtgtgtccaccaaggctgagcgcttggagaaacagaaagttatgtctgagatgtat
gcagagaatcagcaaaaactgaaagaccgagaacaggagctgaaagacatgaagaagatg
atggatgtgacgaagcgttctttagacagggtgcatgaagacacggagcaggtgctgtcg
gagctgcagcgctcggtggagcgtctgcaggagctgctggaggaggttctgcatcaggcc
agccaggagaagatgggacatgctcaggaggtcgccaacagcctgcaggctgagattaag
gagctgaagaagagggacatggagatgaaggacctggccctctgtgaggaccacatccat
tacttggagacatacgagtccatgtgccatcccttagagtcgggggacctgccccctgtg
ttggtcaatctggaagctacctttgagcctgcacgagaagccatcctagacctcagggac
cgagtcgaggacctgtgcaaccaggagctgagcaagatcaccaaacaagtcaatgacaca
actctgttcaccttgcgagactccaatcgcagcgcaggacagaaaggagggatttttaaa
ttgttttctggtctgggttctcgcaacacaaacagccgttcaccagctactccacccagt
atttcagtgggagcacggagtacagacagacggggacttggtataggcctcaaaagtcaa
gacgtgaggagtagagacacaccacgagtagacagaggaaacacaaactcacccagactt
cgggacagacagaggggagaggaaagagagacagtgagggagaccaactccaggcccagc
cccagccccagccccactcccagccgcagagagtctccgtctctttggagcaggtccagt
cagagccaggcggtccctgctgcggccccgactccgactccactgccagccaccccaact
cctgctccaactccagcccctgccccagcatcaactggagggtctagtttcagtcggatg
gcctcgatcagcagcctcttccgctcccatcggcgtggcaccaaacaggccaccccagct
tccccggccaatgacacactgtcaccaggaggaaccccatgggggatggctgctctgcct
gaaacaccgacagaaattaaccccgggctgttcttggactcgcccacccccggcatcatg
gataacgctcctgctttccctgcactgagagaaatcaacctcgacagcatccaggcccca
gagccgaggaccagagaggagttcctacagtactctgtgacgttgacccttgactccaac
acggcccaccgacggctggctctctccgacggcaacactaaagccacgctgcaggtggcg
gcgcagccctaccctgacactccgcagcgttttgatggctggacccaggtgatgtgccag
agccccctgtacgcccagcgctcttactgggaggtggagtggagaggccggggctcctct
atgggcgtagtctacggggcgttgaacaggaagggctcagacgcccggtcggggctcggt
tacaacgcccagtcctggaccctggagctgtcggacacctgctgctcagccatgcacgac
aatgagaagaaggacataccggtcacctactcccctcgcctgggcatctacctggacctg
tccacggggacgctggccttctacagcgtggcagagagcatgacacaccttcacaccttc
cgcgctaacttcacccagccgctttacgctgccttcggggtgggcagcggagtcggggtg
ggtctagacttcgccctcggccagttcagctccagctctgacagcatcaagatctgtccc
atgtga
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integrated database retrieval system
