Sander lucioperca (pikeperch): 116044675
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Entry
116044675 CDS
T07345
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein isoform X1
KO
K19538
retinitis pigmentosa 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sluc03037
]
116044675 (rp1l1a)
04812 Cytoskeleton proteins [BR:
sluc04812
]
116044675 (rp1l1a)
Cilium and associated proteins [BR:
sluc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116044675 (rp1l1a)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
116044675 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
116044675
NCBI-ProteinID:
XP_035854693
LinkDB
All DBs
Position
24:12490918..12507388
Genome browser
AA seq
2756 aa
AA seq
DB search
MYSVEAGMWDPQPPSKHASSISPRPPSNLRPAHVIAAPPAKRITFYKSGDRQFGGVKMAI
QKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGIHAIKHLEQLQDGGCYLCSDRRQAKPV
NMELAGKRPTIWYHHSRRPQQPESSSTTPPGHQSNRQRRILLVKNSEPGMRRSVVLSRRS
TRSLKSFLDEVSEVMQFHVRKLYTAEGRRIDSVQNLMTCPGTLVCVGREAFSPLLVNFIR
KSSEEKLPGLGSRGPALGPRTPGNGARSPATQGARSPPRGAQSRASEYSEGHESRKNVNF
GLETKKSIIHPRSDSSNRSTRFSLSSEKSFSNGVSAYSQARPAIMNDDIEKRVLVNKDGS
LSVEMRVRFRLHNDETLQWSTQVKKSPSLTNECCPLSQAQPHYLQQGQSESCSDSTSFDP
EGVDYSNQPVQHVLEGNQCPCCYQRQEQQYDLWENPAHSQKQHPVPPPHPPSHAHTLLRH
THSSSSSSSCNSRRVVRCRARVTNCGAGSKQSQLVQEEMFMTEQVERRVELEQDGDTQVE
VCRMSQCCSRSEVVAIDSNLRPLSRKSAEDELMMEEEGERPLSAISSSSHILQSLQEDQD
DDLPPSASQCCHSNEPSPSPTSQTHLSDKPTSSVAAVYVHSTEHETQEEDRGSRAVSVAS
SCHCGAATPHSTAEAEEMDRAPSSKSKPSRASSRSSKVRIPNSEEEGAADDEDEDVKRVV
SGLSGHTGCSLQSRGSSVCPNCGGCKRGVNSESNSRASQRSQHSHRASPKQASPLSSQEN
ANNGSDDDDGSEGSDGSTKSNKTNLTNNGRCSAISNILEDRASSAMSNPDEAGKEEERAL
SATSATSHRSNRSHKSGYNGSPCGIAQKEEERSPSAMSAQSNMSAKSSKSHKSNCSCTAD
APDIKTTEDAEEENNEERALSSLSAKSGASAETSASVKKGTKVASPTDNTAVEENDTNKR
TPSALSDKPGEAERPDSVMSAKSAKSNVSAKSGTSHRSTCSHYASRADGPVIKAIEQEEE
MESEERAASAMSDKSNLSAKSNKSHKSIKAAETSLSPGENEEDGEDGEDGEERAASQVSG
RLVKSNTSNSNDNETAASPSSKEKENELGEDEQQRPESVISAKSASSAKSHRTNCDTSSR
VASPAKDTAKTEVDGMEDRTPSAMSSKSHTSAKSSKSQKSNQTTASPNPNEDAMPSIEIN
GKEEHNENRERVASAMSVKSKSSMRSRTSHKSSKNLKLVSPSPNVVTFQTPEGVDEDGNE
TTERAQSAASAKSGKSNVSTLSRKSHHKRTADVAVIETADADENVEDNSTKSKSHGQTLS
PRRSCSPLTHSPKAASPSRSGKSKCGCGAASALEKSKEEKEGEKKENPEELKNEEASERA
ASILSSSSRRQRRESGGTEQPLSRNSSGSVSLGLPEDQEIADSDSGKSCVSFHTNTGEKD
RVKTVTPHAPKSSEQSALKEERGGTGSIMSQMSNSKSTHNHPAVDIPTIKTTGGSRDKGE
EGGEQTTERGASALSAKSSRSHKSSCSCGVKAPRMLDSKPKQHTSASPTKAGNDLETASL
KSASTTKASKMDANDNRTSSAMSAASAKARSKSPANASAENANVAGDSGDNHTATQAISR
PASKAEGEEDIADNKAASVQSKSPHSLRPDSAASAHSGSKMKASKEIKSNSRPSSKVETS
SGSTLHHSMSAADMLKKTMAAAAAVRPNSQQSKASKTSDKSRSKKSQRSRNQTDHEELEL
SPACLPNASPNEVVSDWLRNIPANSCMLALGDGLNEEEQEKVEEEKPGEEEAKEEGSPEV
GKVEDKEEDVEADEEEQKEEEAECDAAEEEKSSDPAPVGGDAVGTRPKTLLSSSDALPKS
WHSSVAVMKVLLSSSPGRCQSMPEVSPVYGRRLSTSARGFLDCLAQLQLIEPKVTPGFDQ
QKDHNQQYEDIMAILQSLWLTSPRDIETKEGKDVGTEQVTPPRSSSGVGMSSGSGGSGKE
NGTQGGDETNQNKTKESSLHEEEEGGAEKVGEEEEEGNAEAELKETEAEPEETDVAEEEV
QSEEQSPSLDSPKATENPSSSDKSSANDSSKSPTDNEHETAEDSGSSGTPPTVLRAPLSK
RLSQDPDPVWVLHLLKKLEKQFMDHYIDAMAEFKVRWDLDDSLMLDTMIGELREEVSRRI
QSSIQREVRKIQSRAGRGGKLPRPPQSANLSRESTVTEKRRQILKVMKNQSVKTADCLSD
GEMTAEFSDQRSDDEFCPCDACVRKKMAARPLKANPLAAEAPVMMEFDLLKILQLKKTPS
PVPAVVSQSAEVEGDSEVADEEGRNLEVVQEEEEEEETKEDIKADVVLEETIPEEDEEIG
KEEEDGGEAGDDEEEEAEKEESIAGVEDQEEKETGGEETGEEETSGNGVEEEEAECQCQC
ARNEEESDKAEEGEEETAGEAAEETSDNAAEDETGDDEERAGEEEGENAEDEEEPGGNDG
ETATEKEEEESDKETVKEATAGEGETTENVEGEEEEAEVEECEVSEFKEEDEEKEGEEEG
KEGEEEEEVKEEVTGKESGEDEDSGETEDDSAAKNEESTPLEEFVEGNVSASAEGDDAAG
EGESHEDEKEGESEEPADEASEEERTSSKGQGVTVTEGEEADAEESDTDSKRPSNTSVAE
SGREGAGATEDEEGREGGEDGDEADDAVEEFKPEEEEEEDGEVDKRENGALFHQFTRTSV
ESQPGSLEDIGTESPHNLVSSIEVPKRAACVCGQRRSRSPGRVKRSKPKECDVELN
NT seq
8271 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggtcgaggcagggatgtgggacccccagcccccgtctaaacatgcctcgtcc
atctccccgcgacccccctccaatttacgccctgcccatgtgatcgcagcccccccagcc
aagaggatcaccttctacaaaagcggcgacagacagttcgggggcgtcaagatggccatc
caaaagcgcagcttcaaatgtttcgatgccctgctggacgacctttcccaaaaggtgccc
ttgccatttggcgtgcggactgtgaccactccccgcggcatccatgccatcaaacacctg
gagcagctccaggacggtggctgctacctctgctctgaccggcgccaggctaagccagtc
aacatggagctggccggcaaacgcccgaccatctggtaccatcacagccggaggccccag
cagcccgaatcctcatccacaacaccgcccggccatcagtctaacaggcagcggcggatc
ctgctggtgaagaacagcgagccggggatgaggaggagcgtggtgctgagcaggaggtca
accaggagcctgaagtcctttcttgatgaggtgtcagaggtgatgcagtttcatgtccgc
aagctctacactgctgagggacgaaggattgacagcgtacaaaacctgatgacttgtcct
ggtacgttggtgtgcgttggccgggaagccttcagcccactgttggtaaacttcatcagg
aagagctcagaggaaaaactgcctggtctgggcagcaggggccctgctcttggccccagg
actcctggaaatggggccagatctcctgctactcaaggagcaagatccccacctcgtgga
gctcagtccagagccagcgaatacagcgaagggcatgaaagcaggaaaaatgttaacttt
ggtctggaaaccaaaaaaagcataatccatcctcgttcagattcctcaaaccgctccacc
cgtttctccttgtcttcagagaagtcattcagcaatggtgtcagcgcctactcccaggcc
agaccagctattatgaacgatgacattgaaaagcgtgtcctggtcaataaagacggcagc
ctgtcagttgagatgagggtgcgtttccgactacacaatgacgagaccctgcagtggtct
acacaagtcaaaaaatccccatctctgactaatgaatgttgccccctgagccaggcccag
ccccattacctgcagcagggccaatcagagagctgctctgattccacatcctttgaccca
gagggtgtggattattctaaccaacctgtgcagcatgtattggaggggaaccaatgcccc
tgctgttaccagagacaggaacagcaatacgacttatgggaaaacccagcacacagccaa
aaacagcatcctgtccctcctccacatccacccagccacgcccacactctgttgagacat
acacactcttctagctcttcctcgtcatgtaattccaggagggtggtgcgctgtcgagca
cgagtcacgaactgcggagcaggttcaaagcagagccaactggtccaggaggagatgttt
atgacggagcaggtcgagcgcagagtagagctggagcaagatggagatacccaagtcgag
gtgtgcaggatgagccaatgctgcagccgcagtgaagtagttgccattgacagcaaccta
cgaccacttagcaggaagtcagcagaggatgagctaatgatggaggaagaaggggagcgt
ccgctgtctgcaatcagtagctcctcacatatccttcaatcactgcaagaggaccaggat
gatgacctgccacccagcgcctcacaatgctgtcatagcaatgaaccatctccttcccca
acttcccagactcacctgagcgacaaaccaacaagcagtgtcgcggctgtttatgtccac
tctacagaacacgagacgcaagaggaagacagaggaagcagagcagtatctgtagcctct
tcctgtcactgtggagcagccaccccacattcaacagctgaagcagaggagatggatcga
gctcccagctccaagtccaaaccgagcagagcctcaagcaggtccagcaaagtccggatc
ccaaactcagaagaagagggggctgcagatgatgaggatgaagatgtaaagagggttgtt
agtggcttgtctggtcatacaggatgttctctgcagtcaaggggatccagtgtatgtccc
aattgtggcggatgcaaacgtggggtcaactcagaatccaatagcagagcatcacagagg
tcccagcattcccaccgagcctctccaaagcaggcgtcacctctttccagccaagagaat
gcaaataatggcagtgatgatgatgatggctcagaaggttcagatgggtccacaaaatcc
aacaagaccaacctcaccaacaatggccgctgctctgcaatatcaaacatcctggaggac
agagcatctagtgccatgtccaatcctgatgaagcaggaaaagaggaagaaagggctctg
agtgccacctcagccacaagccacaggtccaatagatcacacaagtctggctataatggc
agcccttgtggtatagcacaaaaagaggaggagagaagccctagtgccatgtcggctcag
tccaacatgtctgccaagtccagcaagtcacacaagtccaactgcagctgcaccgctgac
gctccggacataaagacaacagaggatgcagaagaagagaacaatgaagaaagagcactt
agctccttgtcagccaaatctggtgcctcggcggagaccagtgcttcagtcaagaaagga
actaaggttgcctcaccaactgacaatacagctgtggaggagaatgacacaaacaaaaga
actcccagtgccctatctgataagcctggcgaggcagaaagaccagatagtgtcatgtct
gctaaatcagctaaatctaatgtgtcagcaaagtccggcacatctcacaggtctacttgc
agtcactatgcatctcgagctgatggacccgttatcaaagcaatagaacaggaagaagaa
atggagtcagaggagagagcagcgagtgccatgtcagacaaatcaaatctttctgccaag
tctaataaatcccataagtccatcaaagctgcagaaacgtcactttctcctggagaaaat
gaagaagatggagaagatggagaagatggagaagaaagggcagcgagtcaagtgtcaggc
agattagtcaaatctaacacgtctaactctaatgacaatgaaaccgctgcatctccaagc
tccaaggaaaaagaaaatgagctgggagaagatgaacagcagaggcctgaaagtgtaata
tctgctaaatcagcttcttctgcaaagtctcaccgcacaaattgtgacacaagttcaaga
gtggcttctccagccaaagacacagcaaagacagaggtagacggcatggaggacagaacc
cccagcgccatgtctagtaaatcacacacctctgcaaagtcctccaagtcccagaagtca
aatcaaaccacagcatctccaaatccaaatgaagatgctatgccttctattgagataaat
ggaaaagaggagcataatgaaaatcgagagcgggtggccagtgccatgtctgtcaagtca
aaatcttcgatgaggtcccgtacttctcacaagtctagcaagaatctcaaactggtgtca
ccaagtccaaatgttgtcacctttcaaacaccagagggggttgatgaagatggaaatgag
acaacagagagagcacaaagtgctgcttctgctaaatcagggaaatctaatgtttcgact
ttatcgcgtaagtctcatcataagagaacagctgatgttgctgttattgaaacagcagat
gcagatgaaaacgtggaagacaattcaacaaaaagtaaatctcacggacaaacgctctca
cccaggaggtcgtgttccccactgacccactcacccaaagctgcatcccccagcagatct
ggcaaatcaaaatgtggctgtggagcagcttcagcacttgaaaagtcaaaggaagaaaaa
gagggggagaaaaaggaaaatcctgaggaacttaaaaatgaggaggcttctgagcgggcc
gccagcatcctgtcgtcctcaagcagaaggcagaggagagaatcaggaggcactgagcaa
ccactgagtcgaaactcatcaggctcagtctctcttgggttgccagaagaccaggaaata
gccgactcagacagtggcaagtcctgtgtttcttttcacacaaatactggggaaaaggac
agagtgaagacagttactccccatgcccccaaaagctcagaacagtccgctttgaaggaa
gaaagggggggaacggggtccatcatgtctcaaatgtccaacagtaaaagcactcacaat
catccagcagttgatatccctactattaaaacaacaggggggagcagggataaaggtgaa
gaaggtggggagcaaacaacagagagaggagccagtgcattgtcagccaaaagcagcagg
tctcacaagtcttcttgtagctgtggcgtcaaagcacctcgaatgcttgacagtaagcca
aagcaacacactagtgccagcccaaccaaagcaggaaatgaccttgaaacagcaagtttg
aagtcagcttcgacgacaaaagctagcaaaatggacgccaatgacaacaggacatcatct
gcaatgtcagcagcaagtgctaaagctcggagcaaatcccctgcaaatgctagcgctgaa
aatgccaatgtagctggagattcaggagataatcacactgcaactcaggccatcagtaga
ccagctagtaaggccgaaggggaagaagatatcgcagacaataaggcggcgagtgtccaa
tccaagagtccccatagcctcaggcctgattcggcagcttcagctcactcaggctcaaaa
atgaaagcatcaaaggagattaaatccaattccagaccaagcagcaaagtggagacatct
agtgggagcactctgcatcactctatgtctgctgctgacatgctgaagaaaaccatggct
gctgctgctgctgtacgtccaaacagccaacagtcgaaggccagtaaaaccagtgacaag
tccaggagtaaaaagtctcagaggagcaggaaccagacggatcacgaggaactggaactg
tcacctgcctgtctgcctaacgcttcccccaatgaggttgtcagtgactggctgcggaac
attcccgctaacagctgcatgctcgcacttggtgatgggctgaatgaggaggagcaggag
aaggtggaggaagagaaacctggagaagaggaagcaaaggaggagggaagtccagaagtg
gggaaagtggaagacaaggaggaggatgttgaggctgacgaggaagaacagaaagaggag
gaggctgaatgtgatgcagcagaggaggagaagagttcagatccagctccagttggtggt
gatgcagtggggactcgcccaaaaactctgttgtcaagcagtgacgctctgcccaagagt
tggcattcttcagttgcagtgatgaaagttcttctgagctcctctccgggtcgatgtcag
agcatgcctgaggtgtctccagtttatggtcgtagactgagcacatcagccagggggttt
ctggactgtttggcccagctccagctcattgagcctaaagtgacccctggctttgaccaa
cagaaggaccacaaccagcagtatgaggacattatggccatccttcagtctctctggctc
acttcacccagggacattgaaaccaaggagggcaaggacgttggcacagagcaggtgact
ccaccgaggtcctcatctggggtgggaatgagcagtggctctggcggatcagggaaggag
aatggaactcaaggtggagatgaaacaaatcaaaacaaaacaaaagagtcctctttacat
gaggaggaggaggggggagcggagaaggttggagaagaggaagaggaaggaaatgcagag
gcagaactcaaggaaactgaggcagaaccagaggagacagacgttgcagaggaagaggta
cagagtgaagaacaaagtccaagtctggacagcccaaaagccactgagaatccctcgtca
tcggacaagagctctgccaacgacagctccaaatcccccaccgataacgaacacgagacg
gcggaggactcaggcagctcaggcacgcccccgactgtcctgcgagcaccattgtcaaaa
cgactatcccaagaccctgatccggtgtgggtcctgcaccttctgaagaaactggagaaa
cagttcatggaccactacattgacgccatggcggagttcaaagttcgttgggacctggac
gacagcctcatgttggacaccatgatcggcgagctgagggaagaggtgagcagacgcatc
cagagcagcatccagcgcgaggtgaggaagattcagagtcgcgccggcagaggggggaag
ttgccccggccgccgcaaagtgcgaacctctccagggagtccaccgtaacagagaagagg
cgtcaaatattgaaggtcatgaagaaccagtcagtaaaaaccgctgattgcctgagcgat
ggagagatgacggctgagttcagcgaccagcgaagcgatgacgagttctgcccctgcgac
gcttgtgttcgcaagaaaatggctgcccggcctctcaaagctaacccgcttgcagccgaa
gcaccagtgatgatggagtttgacctccttaagattctgcagctgaagaaaaccccatcg
cctgtgcctgcagttgtgtcgcaatctgcagaggtggaaggtgatagcgaggtagcagac
gaggaggggaggaatttagaggtagtgcaggaggaagaagaggaggaggaaactaaagag
gatattaaagctgatgttgttttagaggagacgatcccagaggaagatgaggaaataggg
aaagaagaagaagatgggggtgaggcaggagatgatgaggaggaagaagctgaaaaggag
gaaagtattgcaggtgttgaggatcaggaagagaaagaaacaggtggtgaggaaactggg
gaagaggagacatcaggaaacggagtggaagaggaagaggcagaatgccaatgccagtgt
gccagaaatgaggaggagagcgacaaagcagaagagggagaggaggaaacagcaggagag
gctgctgaggaaaccagcgacaacgcagctgaggatgagacaggagatgatgaagagaga
gcaggggaggaagagggggagaacgcagaggatgaagaggagccagggggcaatgacgga
gagacagcaaccgagaaagaggaggaggagagtgacaaggagacggtaaaagaggcaaca
gcgggtgaaggagagaccactgaaaatgtcgagggtgaggaggaggaagccgaggtggaa
gagtgtgaggtgtctgaatttaaggaagaagatgaagaaaaggaaggagaagaagaagga
aaggaaggagaagaagaagaagaagtaaaggaagaagtgacaggcaaggaaagcggagaa
gatgaggattctggggaaacggaggatgacagtgctgcaaaaaatgaagaatccacgccg
ctggaggagtttgtggagggtaacgtcagcgcttcggcagaaggggatgatgctgccgga
gagggggagtcacatgaagacgaaaaggaaggagagagtgaagagccagcagacgaggca
tcggaggaggaaagaacctcatcaaagggccagggggtgactgtgaccgagggagaggag
gccgacgccgaagaatcggacaccgacagcaaacgtccaagcaacaccagcgtggcggaa
tcagggcgtgagggggccggagccacagaagacgaggaggggagagagggtggagaagat
ggagatgaggcggatgatgctgttgaagaattcaaaccagaggaagaggaggaggaggat
ggagaggtggacaaaagggagaacggtgctctcttccatcagttcaccaggacctctgtg
gagtcccagcccggctctttggaggacattggcacagagtcaccccataaccttgtcagc
tccatagaagtgcccaaaagggctgcttgtgtatgtggccagaggaggagccgctcgccg
ggcagggtcaaacggtccaaacccaaagagtgtgacgttgaattgaattga
DBGET
integrated database retrieval system
