Sander lucioperca (pikeperch): 116044724
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Entry
116044724 CDS
T07345
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04136
Autophagy - other
sluc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116044724 (atg13)
04136 Autophagy - other
116044724 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116044724 (atg13)
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116044724 (atg13)
Membrane trafficking [BR:
sluc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116044724 (atg13)
Atg1 complex
116044724 (atg13)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116044724 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116044724
NCBI-ProteinID:
XP_031148009
Ensembl:
ENSSLUG00000018288
UniProt:
A0A8C9ZKE0
LinkDB
All DBs
Position
24:complement(8605321..8614233)
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AA seq
535 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTITLSCAYRINLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRANMGHPCNYRAPDEED
GYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLPLPLAPGLVTHTLYAS
RLSYHHPAQAGAAELCHPAANQGLHAGKEHGGVVLVPQPPHGADAHLTVEHAANTPGSSG
GDDGLTHSGERRRDEGRSVSPSDPVESLNAFTRKIGAFVNKSNTPITAASLDLPFAAFAP
RGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSDGSGQQDDFVMVDFRPAFSKDDLLPMD
LGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaaattcattaagttcttt
gccttgaagaccgtccaggtgattgtccaagctcgtctcggagagaagatatgcactcgc
tcgtcctcatcgcctactggctctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcactggctggccaacttccaggcatcggacgctccatg
tgtgtcgagatctccctgaagacatcagagggtgactcaatggagttagagacctggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtttcatatacagtctacaatcgt
ctgtctgtccttctgaagtctctgctggccatcaccagagtaacacctgcttataaactg
tctagaaagcaaggacacgactatgtcatattatacaggatttacttcggggaagtacag
ctgagtggattaggagaaggttttcagacggtgcgtgttggtgtcgttggcacccctgtt
ggcacaatcacactttcatgtgcttatcgcatcaacctggcattcatgtccaacagacag
tttgagcggtcagctccaatcatggggatcatcgtggatcactttgtggatcctccctgc
agcagccagcgtgcaaacatgggacatccctgcaactacagagctccagatgaggaggat
ggatatgcaggggttcaggattcacaggaggtctgcaccacctccttctccacctccccc
ccctcacagtgtgtgtgtacactgagtccttcgccctctaaactgtctaagcccctccct
ctggacagtctgccgcttccattggctcctggacttgtcactcacactctgtatgcttcc
aggttatcatatcatcatccagctcaagcaggagctgctgagctttgtcaccctgctgca
aaccagggtttgcatgctgggaaggagcatggtggggttgtgttggttccccagcctcct
catggagctgatgcccatctgacagtagagcacgccgccaacacacctggcagcagtggc
ggcgatgacggcctgacgcacagcggagaaaggaggagggacgaagggaggagcgtttct
ccctctgaccccgtggagtctctcaacgcgttcacgcggaaaatcggagcttttgtcaat
aaatccaacacaccgataacagcagccagtctggacctgccattcgctgcatttgctcct
cgaggcctggactcagaggagaatgatcccatggtgcagcctccagactctcctccttgc
ccgtcccccctgcaggccagcctccattctcagggctcagacggatcagggcagcaggat
gactttgtcatggttgactttcgtccagccttctctaaagacgacttgttgccgatggat
ctgggcactttctacagagagtttcaaaaccctcctcaactagccagcctctcactacac
atcagctcccagtccatggccgatgacttggactcactgccagagaagctggccgtttat
gagaaaaacattgatgagtttgatgcttttgtggacatgctccaatag
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