Sander lucioperca (pikeperch): 116044815
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Entry
116044815 CDS
T07345
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116044815 (sox1b)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116044815 (sox1b)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116044815
NCBI-ProteinID:
XP_031148163
Ensembl:
ENSSLUG00000018748
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All DBs
Position
24:8854512..8856467
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AA seq
355 aa
AA seq
DB search
MYSIMMETDLHSPVMPQTNPSNPGGHAGGGGGGHGGKVPQDRIKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT
LLKKDKYSLAGGLLGSPAGVGMGGGQRLESPGGGHAGANAGYATHVNGWANGTYSGQVAA
AAAAAHAMMQEAQLAYTQHPGTGAHPHHPHHPHHPHHHPHNPQPVHRYDMSALSYSPISN
STQSYMSASPPGYGGITGYTHQHQSSGISPVSGAIGGTLGSLVKSEPSVSPPVSTARAPP
PCPTGDLRDMISMYLPTGEAAGDSTVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtgatgccccagactaaccca
tccaacccggggggacacgcgggaggaggaggcgggggacacggcggcaaagtcccccag
gacagaatcaagagacccatgaacgcattcatggtctggtcccggggccagaggcggaaa
atggcacaggagaaccccaagatgcacaactcggagatcagcaagcggctgggtgcagag
tggaaggtgatgaccgaggcggagaaaagaccgttcatcgatgaggcaaagcggctccgg
gccatgcacatgaaggaacacccggactacaagtaccggccgcggaggaagaccaagacg
ctgctaaagaaggacaaatactcgctggcaggcgggctcctcggctcacctgcgggtgta
gggatgggtggcgggcagcgactggagagccctggagggggccacgcaggggcaaatgcg
ggctacgccacgcacgttaacggctgggcaaacggcacatactctggccaggtggcggct
gcagcagcagcggctcacgcaatgatgcaagaggcgcagctggcatatacgcaacacccg
ggcaccggagctcacccgcaccacccgcatcacccgcatcacccacatcaccacccccac
aacccgcagcccgtgcacaggtacgacatgagcgccttatcttacagccccatctcaaac
tctacacaaagctacatgagcgcctctccgccgggatatggtggtatcaccggctacact
caccagcaccaaagctccggtatctccccggtgtccggggcgatcggagggactttgggg
tcccttgtgaaatctgagcccagcgtgagccccccagtttccacggctcgcgcgccaccg
ccgtgccctacgggggacctgagggacatgatcagcatgtatctgccgaccggcgaagcg
gcgggggactccacggttcatagcagactgcacgtgctccacccgcagcactaccagagc
agcggctccactccggtaaacgggacggttcctctgactcatatttaa
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