Sander lucioperca (pikeperch): 116044841
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Entry
116044841 CDS
T07345
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116044841
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116044841
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116044841
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116044841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Sec7-like_HUS
Cnd1
Adaptin_N
MMS19_N
HEAT_DAAF5
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
116044841
NCBI-ProteinID:
XP_031148226
Ensembl:
ENSSLUG00000000970
LinkDB
All DBs
Position
24:16541804..16592789
Genome browser
AA seq
1616 aa
AA seq
DB search
MEEEVSMEFLLEQVMQKDLGKRLQVGQEIMELILDEEKCPDMEQDQTVLDRMVDTVASSW
VNSSNFKVVLFGMDILSALVTRLQERFRTQVGTVLPSLIDRLGDAKDQVRDQDQALLLKI
MDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPVS
DKNFEDDDSGDGGRSSSSSKGASLSGKKTVSMGSFRRPASSTKSAGRDGSGAGAVDEEDF
IQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAVEFDGF
PQQLRLMEAAFKLSAKDLRSQVVREACLTLSHLSLVLGSRFDHAAEAIMPTLLNLVPNSA
KVMATSGIATIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTNSLER
HGAVLMETIKKGVHDADAEARSVARKCYWSFHSHFRREAEQLFQGLEASYQKALQAHLRS
GDSLVSLPASDRSSSSSQESLNRPLSVKNTFGSGTTRSKASHTRTPAAASSPGSLQRSRS
DVDVNAAATATARTRMPAVSSAMQSSASPFSSASALPPGSYASLGRVRTRKTSSGNGPSV
TDSRGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRIPRPTMGTALATTNSTSTGLSDKSRP
RGHRSQGCSRETSPTRSGTARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLVTRRHS
RSTSALSSAECYSDRLSHQARISASVNAMKILNTGTDVEAAVADALLLGDSRSKRRPVRR
RFESPGMYSDDDANSDASSACSERSYSSRNGGVAPHYLRQTEDVAEVLNHCASANWSERK
EGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHRDDLQ
DWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFSYEQQFNILMRFIVDQTQTPNLK
VKVAILRYIEALARQMDPADFVNSSETRLAVSRVITWTTEPKSSDVRKTLHSWAGEDFSG
RPSTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHL
RNASANSGISMASPSNSAGRTPPRPPSSRSSPLTSPTNCSHGGLSPSRLWGWSADGLSKL
PPPPFPSPLPPPTAHSSVKAVRRAYSPSMLEYDSENLNSEEIYSSLRGVTEAIQNFSFRS
QEDLMEPLRRDGKRDGMSGVGASSELGGEVVGGGRTALDNKTSLLNTPSPRSFAGPRFRD
YNPYNYTDSISTLDKASLKEALFEDAVEQLRDGSRQECVENKIVNPKSFPAVPAEQLQLV
GELLKELSQGQAGERGPEDRRGTLLELLKVAREDSLVVWEEHFKTMLLLLLETLGDKDHT
IRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAASIQPE
QCIKVLCPIVQTADYPINLAAIKMQTRAIERIAKEPLHQLLSDIIPGLLQGYDNTESSVR
KASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggtgagcatggagtttttgctggagcaggtgatgcagaaggacctgggg
aagaggctccaggtgggccaggagatcatggagctcatcctggacgaggagaagtgcccc
gacatggagcaggaccagaccgtgctggacaggatggtggacacagtggccagctcctgg
gtcaactccagcaacttcaaggtggttttatttgggatggacatcctgtccgctctggtc
acccgactgcaggagagattcaggacgcaggttggaacagttctaccgagcctcatcgat
cggttaggagacgccaaggaccaagttcgagaccaggaccaagcgctgctgctgaagatt
atggaccaggctgctaacccacagtatgtgtgggagcgaatgatgggaggcttcaagcat
aagaacaacaggaccagagaaggactctgcctctgtctcatctcaaccctaaatgtgttt
ggatctcagagtctgacgctcagtaaaatcgttcctcacatctgtaacctcctcggagat
cccacaagtcaggtgcgtgacggagccatgaactgcctcgtagagatataccgccacgtc
ggagaacgagtgagaatggacctgggaaagaagggtctgcctcagtcacggctaaacgtc
atcttcagtaaatttgacgaagttcagaggtcagggaacatggtcctttcacctgtgtca
gacaaaaactttgaggatgatgactcgggggacggcggccgctcctcgtcctcttccaaa
ggagcctcgctatctgggaagaagacggtgagcatgggttcatttcgacgccccgcctcc
agcaccaagtctgcagggagggatgggtctggtgctggagctgtggacgaagaggacttc
attcaggcctttgaggacgtccccacagtgcagatctactccaacagggaggtagaggag
gccatgacgaagatccgagacgtgctgtcagacgataagagggactgggagctcagagtg
gcagctctaaagaaggtgcgttcgctgctcctggccggtgcagtggagtttgatgggttt
ccgcagcagctgcggctcatggaagcagcgttcaaactgtccgccaaggacctccgctct
caggtggtcagagaggcatgcctcactctgagccacctgtcgttggtgctgggcagtcgg
ttcgaccacgcggcagaggccatcatgccaaccctcctcaacctggtccccaacagtgcc
aaagtcatggctacctccggcattgccactatccgcctcatcctccgacacacacactac
ccacgtctcatccccatcatcaccagcaactgtacctccaaatctgtggctgtcagaagg
cgctgcttcgagttcttggacctgctgctgcaggagtggcagacgaactctctggagaga
catggagcagtgttgatggagaccataaagaaaggtgtccatgatgcagatgcagaggct
cgctctgtggcaagaaagtgctactggagttttcacagtcacttcaggcgggaggcggag
cagctgttccagggcctggaggcgtcctatcagaaagctctgcaggctcacttgaggagc
ggagacagcctggtgtcgctgcccgcctcagatcgctcctcctcctcttcccaggagagc
ctcaatcgaccgctgtctgtaaaaaacacctttggaagcgggacaacaagatccaaagct
tcccacaccaggacgcctgctgcagcctcttctccaggctccctccagcgctctcgcagc
gacgtggacgtcaacgcggcggccactgccactgcccgcaccaggatgcccgccgtgtcc
tctgccatgcagtcgtcggcttcacccttcagctcggcctcggcccttccccctggatcc
tacgcttcactgggtcgagtacgaaccagaaaaacgagttcaggaaacggtccgtctgtg
acagacagccggggaagaagcagagggaaagtcgtctcgcagtctcaacccggcagcagg
tcaggttctcccggccgcctgctaagctccacctacggcaggatcccgaggccgaccatg
ggcaccgccctcgccaccaccaacagcacttctactggcctgagcgacaagagccggccc
cgaggtcaccgcagccagggctgcagccgagagaccagccccaccagatcaggaacagcc
cggagccgaatcccccgaccaagcatgagtcagggctgcagccgcgaaaccagtcgcgag
agcagccgcgacaccagccccgccaggggtttctcccccctggtgactcgacgtcactcc
cgttcaaccagcgccctgtcctctgcagagtgctactcagaccggctgtctcatcaggct
cggatctcggcatccgtcaacgccatgaaaatcctcaacactggcaccgatgtcgaggct
gccgtcgctgacgctctgctcttaggagactcgaggagtaagcggaggccggtgaggcgg
cgcttcgagtcaccgggaatgtactcggacgacgacgccaacagcgacgcctccagtgct
tgctccgagcgctcgtacagctcacgcaacggcggcgtggcaccgcactacctgcgtcag
acggaggacgtggccgaggtgctgaaccactgcgccagcgccaactggtctgagaggaag
gagggcctgctgggactgcagaacctgctcaagagccaaaggatgctcagtcgcgtggag
ctgaagaggctttgtgagatcttcaccaggatgtttgcagatcctcacagcaagagagtc
tttagtatgttcctggagactctggtggacttcatcacgctgcacagggacgacctgcag
gactggctctttgtcctgctcactcagctgctgaagaagatgggggccgacctgctgggc
tccgtccaggccaaagtccagaaggccctggacgtcaccagagattctttctcatacgag
cagcagttcaacatcctgatgcgtttcatcgtggatcagacgcagacgcccaacctgaag
gtgaaggtggccatcttgcgctacatcgaggcgctcgcccgtcagatggacccggccgac
ttcgtcaactccagcgagacacgcctcgctgtctctcgcgttatcacctggacgaccgag
cccaagagctccgacgtccgcaagacccttcatagctgggcaggggaggatttctcaggc
cgacccagcaccgtggcctctctgccaggagagggcaacctggaggagaggtgcaagcag
gcggcccaggtggtgctaattgccctgtttgagctgaacacgccggagtttaccatgctg
ctcggtgctttgcccaaaaccttccaggacgggaccaccaaactgctgcacaaccacctg
aggaacgccagcgccaacagtggcatcagcatggcgtctcccagtaactcggcaggccgg
acgcctccgcggccgcccagcagccgcagcagcccgctgacctcgcccaccaactgctcc
catgggggtctttctcccagtcggctgtggggctggagcgcagacgggctctccaagctc
cctcctccacccttcccctcccctcttcctccacccactgcccactcctccgtcaaggca
gtgcggcgagcttactcacccagcatgctggagtacgacagtgaaaacctgaactcagag
gagatctacagctctctccgcggcgtcaccgaggccatccagaacttcagcttccgcagc
caagaggacctgatggagccactgaggcgagacggcaagagggacggcatgtccggagtc
ggggcgtcctcagagctcggcggtgaggtggtggggggaggacgcacagccctagacaac
aagacgtctctgctgaatacgccttcgccgcgctcctttgccggcccgcgcttcagagac
tacaacccgtacaactacacggacagcatcagcacactggacaaagcttccctgaaggag
gcgctgtttgaggacgccgtagagcagctgcgagacggcagcagacaagaatgtgtggaa
aacaagatcgtgaaccccaaaagcttccctgccgtccctgctgagcagctgcagctggtc
ggggagctgctgaaggagctctcccagggccaggcaggggagcggggccccgaggaccga
cgggggactctgctggagctgttgaaagtggcccgagaggacagcctggtggtgtgggag
gaacactttaagacgatgctgctgctactgctcgagacgctgggggacaaagatcacacg
atccgggcgctggccctgcgtgtcctgaaggagatcctgaggaatcagccggcccgcttt
aagaactacgctgagcttaccatcatgaagacgctggaggctcataaagactcccacaaa
gaggtggtgcgtgcggcagaggaagcggcctccacgctggcggcctccatccaaccggag
cagtgcatcaaggtcctctgtcccatcgtgcagactgcagactaccccatcaacctggcc
gccatcaagatgcaaacgagggccattgaacgcatcgccaaggagccgctgcatcagctg
ctgtctgacatcatacctggactcctgcagggctacgacaacacagagagcagcgtgagg
aaggccagcgtcttctgcctggtggccatctactctgtgatcggagaggagctgaagcct
tacctcgctcagctgaccggcagcaagatgaagctgctcaacctgtacatcaagagggcc
cagacctccaccagcaacagcagcagctcctccgacatctcgtcctactaa
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