Sander lucioperca (pikeperch): 116044937
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Entry
116044937 CDS
T07345
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03271
Virion - Rotavirus
sluc04145
Phagosome
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04514
Cell adhesion molecules
sluc04530
Tight junction
sluc04810
Regulation of actin cytoskeleton
sluc04820
Cytoskeleton in muscle cells
sluc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
116044937
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116044937
04514 Cell adhesion molecules
116044937
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116044937
09144 Cellular community - eukaryotes
04510 Focal adhesion
116044937
04530 Tight junction
116044937
09142 Cell motility
04820 Cytoskeleton in muscle cells
116044937
04810 Regulation of actin cytoskeleton
116044937
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116044937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116044937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116044937
04515 Cell adhesion molecules [BR:
sluc04515
]
116044937
04090 CD molecules [BR:
sluc04090
]
116044937
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116044937
Exosome [BR:
sluc04147
]
Exosomal proteins
Proteins found in most exosomes
116044937
Cell adhesion molecules [BR:
sluc04515
]
Integrins
Integrin beta subunits
116044937
CD molecules [BR:
sluc04090
]
Proteins
116044937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
116044937
NCBI-ProteinID:
XP_031148349
Ensembl:
ENSSLUG00000019938
UniProt:
A0A8D0AC23
LinkDB
All DBs
Position
9:complement(17728393..17762788)
Genome browser
AA seq
803 aa
AA seq
DB search
MALWLLLIATLSSVLCGSWAQQEGSICIKANAQSCGECIQVAETCGWCADENFLTVGESK
SARCDDLESLKKRNCAVTKIENPRGSINIDKNNPVTNRKKDGSDKLKPEQITQIQPQKLT
LTLRSGEPQTFELKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMKEMQEITSDF
RIGFGSFVEKTVMPYISTTPARLINPCTGNQNCTSPFSYKNVLKLTDKGDEFNRLVSQQQ
ISGNLDSPEGGFDAIMQVAVCENQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGR
CHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDAYNSLSSEVILENNRLPEGVSITYKSICKNGVEGTGENGRKCSNISI
GDEVSFKISIESQKCPAIGKTEVIKIKPQGFTEEVQIVLNFICDCQCATKGEPNSDKCYE
GNGTFECGACKCNEGRIGRLCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENPAEIYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLETSTC
LAKNGQICNGRGTCECGLCKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCRAFEAGEKKD
TCKRDCSYFHLIKVQDRNSLPQPTDQSFPLTHCKERDANDCWFYYTYAIRNDTKEVYVME
HLDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQG
NPIYKSPINQFQNPSYGNKGASL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtggctacttttaatagccacgttgtcatcggtcctctgtggcagctgggca
cagcaagagggaagcatatgcatcaaggcgaacgcacagtcatgtggggaatgcatccag
gtggccgagacgtgtggctggtgtgcagatgaaaacttcctcactgtgggcgagtccaag
tcggcccgctgtgatgatctggagtccctgaagaagaggaattgtgcagtgaccaaaatt
gagaacccacgcggcagcatcaatatcgacaagaacaaccccgtcaccaaccgcaagaag
gacggatctgacaaactgaagcctgagcagatcacccagatccagccccagaaactcacc
ctgacactcagatctggtgagccccagacttttgagctgaagttcaagcgtgcggaggac
taccccatcgacctgtattaccttatggacctctccttctccatgaaagatgatttggaa
aacgtcaagaaccttggcactgacctcatgaaggaaatgcaggagattacctcagatttc
aggatcggttttggctcctttgtggagaagacagtcatgccttacatcagcaccacgcca
gctaggctcatcaatccgtgcacagggaaccagaactgcaccagtcccttcagctataag
aacgtcctgaagctgacagacaagggggacgagttcaaccgcttggtcagtcagcagcag
atctcagggaacctggactctccggagggcggctttgatgccatcatgcaggtggccgtc
tgtgagaaccaaatcggctggaggaacgtgactcgtctgctggtgttttccactgatgct
ggtttccactttgctggagacggcaaactgggcggcatcgtgctgcccaacgatgggagg
tgtcacctggagaacaacatgtacaccatgagccactactatgactacccctccatcgcc
catttggttcagaaactgagtgataacaacatccagaccatctttgccgtcactgaagag
tttcagcctgtttacaaggagctgaaaaatctcattcctaaatcagctgttggcacgctg
tcctccaactccagcaacgtgatcaaactcattattgatgcttacaattctttgtcgtct
gaggtcattctggagaacaacaggctgccggagggagtctccatcacctacaagtccatc
tgtaagaacggtgtggagggaacgggggagaacggcaggaagtgctccaacatctccatc
ggtgacgaggtgtctttcaagatttccattgaatcccagaagtgtccggcgattggcaag
actgaagtcattaaaatcaaaccgcagggcttcaccgaggaggtgcagatagttctgaac
ttcatctgcgactgtcaatgcgccacaaaaggagagcccaacagcgacaagtgctacgag
ggcaacgggaccttcgagtgcggagcctgcaagtgtaatgaagggcgtatcgggcgtctt
tgcgagtgcagcaaagacgaagtgcggacagaggacctggatgccaactgccgcaaagac
aacggtacggatatctgcagcaacaacggcgactgcgtctgtggcacctgcgaatgcaag
aagcgggagaatcctgcagagatctacagtggcaagtactgcgagtgcgacaacttcaac
tgtgaccgctccaacaacaagctctgcggaggacatgggcgctgtgagtgcaggaagtgc
atctgtgacgccaactacacaggcagcgcttgcgactgctccctggagacgtccacctgc
ctcgccaagaacgggcagatctgtaacggccgtggtacctgcgaatgcggcctctgcaaa
tgcaccaaccccaaattccagggtccaacctgcgagatctgtcccacctgccctggcgtc
tgcgctgagcacaaagactgtgtgcagtgccgagcgttcgaggccggtgagaagaaggac
acgtgcaagcgggactgcagctacttccatctgatcaaggtgcaggatcgcaacagcctg
ccccagcctacagaccagagcttccccctgactcactgcaaagagcgagatgccaacgac
tgctggttctactacacctacgccatccggaatgacaccaaggaagtctacgtgatggag
catctggattgcccggcgggacctgacatcatccccatcgtggcgggcgtggtagcgggc
atcgtgctgatcggcctcgccctgctgctcatctggaagctgctcatgatcatccacgac
cgccgcgagttcgccaagttcgagaaggagaagatgaacgccaagtgggacacgcaaggg
aaccccatttacaagagtcctattaaccagttccagaatcccagctatgggaataaaggc
gcttctctttag
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integrated database retrieval system