Sander lucioperca (pikeperch): 116045449
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Entry
116045449 CDS
T07345
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03083
Polycomb repressive complex
sluc04980
Cobalamin transport and metabolism
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116045449
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
116045449
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116045449
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116045449
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116045449
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116045449
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116045449
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
116045449
HMT complexes
COMPASS/SET1 complex
116045449
MLL-HCF complex
116045449
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116045449
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116045449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
116045449
NCBI-ProteinID:
XP_031148960
LinkDB
All DBs
Position
12:18797128..18831073
Genome browser
AA seq
1561 aa
AA seq
DB search
MASEPAVLNPRWKRILGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPAVRGDVPPGCAAYGFACDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSCCYLFGGLANDSEDPKNNIPRYLNDLYSLELRPGSSVVGW
EIPQTSGLPPPPRESHTAVASSGRSANRLIIYGGMSGCRLGDLWVLHIDSLTWSKPDLNG
SAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMCWETV
LMDSVEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCAPSR
VQLVRANTASLEVSWGPSQTAETYLLQLQKYDIPTTPASSPAPNPVPTATPKSPAPVATA
PANQGVPLSGLTLVQSPAASLAAAKAPAVLKVAAAPGATAGGASIVTVRQATPKPQVALT
TLPAGVRMVVPAQAGQGPPIGSSPQMSGMAALAAAAAATQKMPPSTATMMNVPAGATLVK
TMAVSNPATRMLKTAAAQVGGTSVVSTPGTPGRPIITVHKSGTVTVSQQAQVVTTMVGGV
TKTITLVNSPLSMGGGGTLIGNLGNLGKMMTVVHTKPVQSGALTVQAGSSPVTQILQAKG
GLPAGTILKLVTSADGKQTAVLSTAQAGATTAKPTILGVAPATSKPGTTYIKTIPMSALQ
GGAGGNSPFTILTTKMMTPGTAGKIISTVPKITAAGQQGLTQVVLKGAPGMPGTILRTVP
MSGVRLVSSGAVGTKPAVTTLVVKGTTGMSSLGTGTGSVSTIATLANQVTTATAAAGPKQ
VTLITTPSGAEAQPLVQDLPVTFMASPTSEEPGSSTTATTTAAAAGEAGDTAAATVTQVC
SNPPCETHETGTTNTSTVATATMGGNGRVCSNPPCETHETGTTNTSTVATATMGGNGRVC
SNPPCETHETGTTNTSTVATATMGGNGRVCSNPPCETHETGTTNTSTVASASMSQQLQPA
AQRPAALSGATVCSNPPCETHETGTTNTATTATAQQSGDGPQGDSPDSASSSSDPASSTT
ASQSRAVTTVTQSTPTPGPSIPAISSLVGDDKAESSEAEAVATVMAAAAAEEGEEPMQTA
VLQVHMEDSKAGAQMDGLPQELMSSEGDGSEAVSGATTTTTLMVTGLTADQLAVTAATED
AVQQATIQAVLQAAGHIGGGAVDQSIPIVLTQAELAALVQQQLQDVHNQPDAAEAEPQPS
DVPTEGLAPADSLNDPAAESNGHELASAAVTSAVARLASTFGPAPPLTTGGVAKIQPAAT
EATNGVAAAAGRVQVTSSVKDSQWYDVGIVKVTNMVVTHYYVPYDDHMADDDSGVMPDYT
QMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLT
WEPPAVTSGQITEYSVYLAIQSSQAAASGSGPAQLAFMRVYCGPSPSCLVQSSSLANAHI
DYTTKPAIIFRIAARNQKGYGPATQVRWLQESSKDAKAAVKRPGTSPDAKPVGPKKFKTD
Q
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaacccgcggtgctgaacccccgctggaagcgcatcctgggctggaccggg
ccagttccgcggccccggcacggacaccgagccgtggctatcaaggagctaatggtggtg
ttcggcggagggaacgaggggatcgtggatgagctgcacgtctacaacacagctaccaac
cagtggttcatccccgcagtgcgaggcgacgtcccccccggctgcgcagcgtacggcttt
gcatgtgacgggacgaggctgttggtgtttggagggatggtggagtacggcaaatacagc
agcgacctgtacgagctgcaggcgagtcgttgggagtggaaacgtctgaaggccaaggct
ccaaagaatggcccgcccccctgcccccgcctcggacacagcttctctctgattggcagt
tgctgttacctgtttggaggactggccaatgacagtgaagaccccaagaacaacatcccc
aggtatctgaacgacctgtacagtctggagctgcggccaggctccagcgtggtcggctgg
gagatcccgcagacctcgggtctgccgccgccgcccagagagagtcacacggccgtagcg
tcgagcgggcgctcagccaacagactcatcatctatggagggatgagcggctgccggttg
ggagacctgtgggtgctccacatagactctctgacgtggagtaaaccggaccttaatgga
tctgcacccctcccccgcagcctgcactctgccaccaccatcaacaacaagatgtatgtg
tttggaggttgggttcctctggtgatggatgatgtcaaagtggcgactcacgagaaggag
tggaagtgtaccaacacactggcctgtctcaacctagacaccatgtgttgggagacggtc
ctgatggacagcgtggaggagaacctccccagagcccgagcaggtcactgcagtgtggcc
atcaactccagactctacatctggagcggcagagacggctacagaaaggcctggaacaac
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccctgcgctccctctcgg
gtgcagctggtccgggccaacacggcgtctctggaggtgagctggggaccgtcgcagacc
gccgagacctacctgctgcagctgcagaagtacgacattcccaccacgcctgcctctagc
cccgcccccaaccctgtccccacggccacacccaagagccctgcccccgtcgccacggca
ccggccaaccaaggtgtcccgctgtccggcctcacgctggtccaatcccccgctgcctct
ttagccgccgctaaagcaccagcggtcctgaaggtggcagcagctccgggggcaacagca
ggcggcgcctccatcgtcacagtgagacaggccacgcccaaaccccaggtcgccctgacg
acacttcctgccggcgttcgtatggtggtacctgctcaggccggtcaggggccgccaata
ggaagcagtcctcagatgagcggcatggcggctctggcggcggcagctgcagcgactcag
aagatgcccccgtccacggcgacgatgatgaacgtccctgcaggagcaaccctagtaaag
accatggctgtgagtaacccggccactcggatgctgaagaccgctgccgctcaggtgggc
gggacctctgtggtctccacccccgggacccccggccggccaatcatcacggtgcacaag
tcgggcactgtgacggtgtcccagcaggctcaggtggtcaccacgatggtgggcggagtc
acaaagaccatcacgctcgttaacagtccgctcagcatgggcggaggcgggactctgatc
ggtaaccttggtaacctggggaagatgatgaccgtggttcacaccaagccagtccagagt
ggagcgctcactgttcaggctgggagcagcccagtcacccagatcctccaggcgaagggc
ggcctcccagcaggaaccatcttgaagttggtgacctcagcagacggcaaacagaccgcc
gttctcagcaccgcgcaggccggagccacaacagccaaacccaccatcctgggcgtcgcc
ccggcaacctccaaaccggggaccacctacatcaagaccatcccaatgtcggcgctgcag
gggggggcaggtggcaacagtccgttcaccatcctgaccaccaagatgatgacgccaggt
actgccggcaagatcatctccaccgtccccaaaatcactgcagccggccagcaggggctc
acacaggtggtgctgaaaggcgctccagggatgcctggtacgatcctccggaccgtcccc
atgagcggagtccgactggtgtcatcgggagctgtcggcaccaaaccggccgtcaccacg
ctggtcgtcaagggaaccacaggtatgtccagtctggggacaggaacaggaagcgtctcc
accatcgccacgctcgccaaccaggttaccacagcaaccgcagcagccggaccaaaacag
gtgactctgatcacgactccgagcggtgccgaggctcagccgctggtccaggatctgccc
gtcaccttcatggcttctcctacttcagaagaacctggaagtagtactactgctacaact
actgcagcagcagcgggagaggctggagacacggcagctgctacagtgacgcaggtctgc
tccaacccgccctgtgagacgcacgagacgggcaccaccaacacctccaccgtcgccaca
gcaaccatgggcggcaacggcagagtgtgctccaacccgccctgtgagacgcacgagacg
ggcaccaccaacacctccaccgtcgccacagcaaccatgggcggcaacggcagagtgtgc
tccaacccgccctgtgagacgcacgagacgggcaccaccaacacctccaccgtcgccaca
gcaaccatgggcggcaacggcagagtgtgctccaacccgccctgtgagacgcacgagacc
ggcaccaccaacacctccacggtggcgtccgccagcatgagccaacagctgcagccggca
gctcagcgtcctgccgctctgagcggagcgaccgtctgctccaacccgccatgcgagacc
cacgagacgggaaccaccaacaccgccacaacagccacggctcagcagagtggagacggt
ccgcagggagactcgcctgactccgcctcgtcctcctctgacccggcctcctccaccaca
gccagccagagcagagctgtcaccacggttacacagtccacgcccacgcctgggccctcc
atacctgctatctcctcattggtcggagatgacaaggcggagtcctcagaggcagaggct
gttgccacggtgatggcggcagcagcagcagaggagggggaggagcctatgcagacggca
gtgttacaggttcatatggaggacagcaaggcaggggcacagatggacgggcttcctcag
gagctgatgtcatcagagggggacggaagtgaggcggtctccggggcgacgacgacgacg
accctgatggtgacgggactgaccgcggatcagctggctgttaccgcggcaacggaggac
gcggttcagcaggcgacgatacaggcggtcctgcaggcagcggggcacatcggtggcggg
gcggtggaccagtccatccccatcgttctgacccaggcggagctggccgctctggtccag
cagcagctgcaggacgtccacaaccagccggacgcagccgaggcagaaccgcagcccagc
gacgtgcccacagaaggccttgctccagcagacagcctgaacgacccggcagcagagagt
aacgggcatgagcttgcgtcggcggcggtgacgagcgccgtggcacgactggccagtacg
tttggccccgccccccctctgacgaccgggggcgtggctaagattcaacctgctgccacc
gaggcgaccaatggcgtcgcagcagctgcagggagagtccaggtgacatcatcggtgaaa
gacagccagtggtatgacgtcggcatcgtcaaggttaccaacatggtggtcacacattac
tacgtcccctacgacgaccacatggccgacgatgactcgggcgtgatgccggactacact
cagatgaggaaggtggagctgcagccggggacggcctataagttccgtgtcgcagggatc
aacatctgcggccgcggcgcgttctcggaggtgtcggcgtttaaaacgtgtcttcctggt
ttccccggagcgccgtgcgccatcaagatcagcaagaacctggacggggctcagctcacc
tgggagcctccggccgtcacgtcaggacagatcacggagtactcggtgtacctggccatc
cagtccagccaggcggccgcctccggttctggcccggcccagctggccttcatgagggtg
tactgcggccccagcccgtcctgcctggtccagtcctccagcctcgccaacgcccacatc
gactacaccaccaagcccgccatcatcttccgcatcgccgcccgcaaccagaagggctac
gggccagccacgcaggtccggtggctccaagaaagcagtaaagatgccaaagcagcggtg
aagagacccggaacttctcctgatgctaaacctgtcggaccaaagaagttcaaaaccgac
caatag
DBGET
integrated database retrieval system
