Sander lucioperca (pikeperch): 116045450
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Entry
116045450 CDS
T07345
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc02010
ABC transporters
sluc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116045450 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116045450 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116045450 (abcd1)
Enzymes [BR:
sluc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
116045450 (abcd1)
Transporters [BR:
sluc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
116045450 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
SMC_N
ORC-CDC6-like
Adeno_IVa2
Rad17
AAA_15
AAA_5
AAA_18
NACHT
AAA_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
116045450
NCBI-ProteinID:
XP_031148962
Ensembl:
ENSSLUG00000002614
LinkDB
All DBs
Position
12:18899598..18926664
Genome browser
AA seq
761 aa
AA seq
DB search
MQLSCAELPAQLSRSSRLRKLTAALLAAYAVKKLSPYVWRRMQRSAAGKQLGGDNLPVGV
VSPSSSSVDTGGKKKRGSRSPSVNKEFILRLSRLLKLLFPRLLCPEIGLLALHSVTLICR
TFLSIYVAALDGVIVKCIVQKDPQAFMLQLSKWLLVAVPATFINSTIRFLEGRLALSFRS
RLVDHAYQLYFTNQTYYRVSNMDGRLSNPDQSLTEDIVMFSASVAHLYSNLTKPILDVVV
TCYTLLRTAESKGANTTWPPVIAGLVVALTAKVLRSCSPRFGKLVAEEAKRKGDLRYMHS
RIIANSEEIAFYGGHKVEMAQLQSSYMSLSSQIHQILLKRLWYVMLEQFLMKYVWSASGL
VMVAVPIITATGYSKHDSEEVKQVALDMKEEELVSERSQAFTTARNLLNSAADAVERIMS
SYKEVTELAGYTSRVSEMFDVFEDVNAGVYHRSADREEASAAAAGGAVVQHGQRVCGRLE
MRGQVISVEKGIRCENLPIITPTGDVVVSSLNIQVDEKMNVLITGPNGCGKSSLFRILSG
LWPVYGGVLSRPEPQYMFYIPQRPYMSEGTLRDQVIYPDSVEDMVQRGVTDSDLEEILRT
AHLLYILDREGGWEAVSDWKDVLSGGEKQRMGMARMFYHRPRYALLDECTSAVSIDVEGS
IFQAAKDAGIALLSITHRPSLWKYHSHLLQFDGEGGWRFEPLDASTRLSQQEEKQRLENQ
LSGIPKMQQRLAELRILLGEGGGEGGGEEEERTADEEEALS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagctgtgccgagctgccggctcagctgagtcggagctccagactcaggaag
ctgacggccgcgctgctcgccgcctacgccgtcaaaaagctgtcgccgtacgtctggagg
aggatgcagaggagtgcagcaggtaaacagctgggtggagataatcttcctgtgggcgtg
gtcagcccctcctccagctctgtggacaccggagggaagaagaagagaggcagcaggtct
ccatcagtgaacaaggagttcatcctcagactgtctcgtctgttgaagctcttgtttcca
cggttactgtgtccagagataggcctgctcgctctgcactctgtcaccctgatctgcagg
accttcctgtccatctacgtcgccgctttggacggtgtgatagtgaagtgtatcgtccag
aaggatcctcaggccttcatgctgcagctctctaaatggcttctcgtcgccgtccctgca
accttcatcaacagcaccatccgattcctggaaggtcggctcgccctcagcttcaggagc
cgattggtggaccacgcctaccagctgtacttcaccaaccagacgtactaccgcgtcagt
aacatggacggccgtctgtccaatccggatcagtctctcaccgaggacatcgtcatgttt
tcggcctcagtcgctcatctctactccaacctgaccaaacccatcctggacgtggtggtg
acctgctacacgctgctgcgcaccgccgagtccaaaggagcgaacaccacgtggccgccg
gtcatcgctggcctggtggtggcgctcaccgccaaagtcctgcgctcctgctcgcctcga
tttgggaagctggtggcggaggaggcgaagaggaaaggagacctgagatacatgcactcc
cgcatcatcgccaactccgaggagatcgccttctacggtggacacaaggtggagatggcc
cagctgcagagcagctacatgtctctgtcctctcagatccaccagatcctgctgaagcgt
ctctggtacgtcatgctggaacagttcctcatgaagtacgtatggagcgcctctggcctg
gtgatggtcgctgtgcctatcatcaccgccacaggatactccaaacacgactctgaggag
gtgaagcaggtggctctggatatgaaggaggaggagctggtgagcgagcgatcgcaggcc
ttcaccacggccagaaacctcctcaactctgcagccgacgccgtggagaggatcatgagc
tcatacaaggaggtgacggagctggcaggttacacatctcgggtctctgagatgtttgat
gtgtttgaggatgtgaatgcgggcgtgtaccatcgctctgcagacagagaggaggcgtca
gcagcagcagcaggaggagctgtggtccagcacggccagagagtctgtggtcgtctggag
atgagaggtcaggtgatcagtgtggagaaggggattcgctgtgagaacctgccaatcatc
acaccgaccggagacgtggtggtttctagcctcaacatccaggtggatgagaagatgaat
gtgttgatcacaggtcctaacggttgtgggaagagctctctgttcaggatcctcagtgga
ctgtggcctgtttatggaggagtactgtcccgtccagaacctcagtacatgttctacatc
ccacagagaccctacatgtccgaggggaccctcagagaccaggtgatctacccggactcg
gtggaggacatggttcagagaggagtcaccgattcagatctggaggagatccttcggacc
gcccacctgctctacatcctggacagagagggaggttgggaggcggtcagcgactggaaa
gacgttctatctggaggagagaaacagaggatggggatggctcgcatgttctaccaccgc
cctcggtacgctctgttggatgagtgtacaagtgccgtcagcatcgacgtggagggaagt
atcttccaggctgcaaaggatgctgggatagccctgctgtcaattacacacagaccctcc
ctatggaagtaccactctcacctgcttcagtttgacggggaaggaggatggaggttcgaa
cctctggatgcctccactcgtctttctcagcaggaggagaaacaacgtctggagaatcag
ctgtccgggattcccaagatgcaacagaggctggcagagctgcgcatcctgctgggggag
ggagggggggagggagggggggaggaagaggagagaaccgcagatgaagaggaggctctc
tcctga
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