Sander lucioperca (pikeperch): 116045550
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Entry
116045550 CDS
T07345
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116045550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116045550
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
116045550
Endosome - Golgi transport
Arf GTPase associated proteins
116045550
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
116045550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
PH_11
SAM_2
PH_6
PH_3
PH_8
Motif
Other DBs
NCBI-GeneID:
116045550
NCBI-ProteinID:
XP_031149094
Ensembl:
ENSSLUG00000011180
LinkDB
All DBs
Position
5:37714544..37779397
Genome browser
AA seq
1625 aa
AA seq
DB search
MLHSHTSIMSQTDSCLTVWDWLCVLRLEQYSEAFRSEGLATLGQCRNLTPDQLERMGITL
PGHQRRILASLNKTLGNSDTQSDTHSHLLQSERDQRLEEIGHAKVLQRERPVPIPVEEKP
VPKEREKRDGETLRPTPREREKPVPRERHMAKMKEESGEGGEKKPVPGQRKTADRGGKEE
ERDGGIDGEKERPVPKERTRFRSSAPVDCDLNSLVSPTSDTSLPPVPPRSTPNCPPQRFT
SPLSPSPPARTPASPKLDRHAVKAPAVHSRAISQSSTHDPTHAPLHPPNVPSALTRPQTL
AIQLPAQLLGSDGGRKISPVSPTASHSDDINVPPLPPKAGAVPKGPPPIPHRFPAQSPIT
NSPSPTKTVADEMQKDQTPQVPPRIRTPQTLEDTHQSTQPDAQPALPARRVTQPPYESRL
DSLDYDSDEYEDPDLFFPSVHRMNAPDRDMSLQVPAKKKERSTSLYSDDEQLDEDDPSPW
QDGGIDNQQGSFYLPNTGRLAPAPKDDSSQLAAVIKKGWLDKNPPQGALYYQRRWVKLDV
DYLRYFDNDKEVYSKGIISTAFITNVTSVGELKFEVVTNNRTFIFRAESEGERNDWVTVL
KDCSRGRYWRSTMNPSSPLTPDYQGYLELRGLRSKLYTVVASDKVFLYKTMEDYRLGVGI
TSIEMNVGNVKDTDRRGFDLTTPYRIFSFIAESEQLREQWVDAMREAIDEALSNSEVAER
IWAEPSNSFCADCEAPKPEWAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDKNIWTEE
LIQVFLLLGNKQVNSFWAANVPPSEALTSSSCSEERRRFITNKYRQGKYRKYHPLYGNQR
ELDNALCINVQCSDVLETLSLIFCGADVNCPTGVASCPSALSLANAHSQPLQAELIRHNL
NTELPRSEVGGGMEAVHYSPPPCVSYNGFLFKTASMARAITERKAREEFSRRWCTLNDCT
FSYYESDKNSNPNGALKASEIVCLAVDAPEKHGYDSTFELYSESERLYLFGTDDPDSHKE
WVKSIAKSFIPATAEPLLRLAFERIGRLKCKDGLNLQTSKVGWFALVGSTLHAYLEDSKG
EEIHLRKLNELSIQQDNEVLVLVERGRTLYIEGERKLDFAGWCGAIQAAAGSGGDTLSQQ
QLTETDIPVIVHSCIGYITQCGLTSEGIYRKSGVNSRVAALCERFRRDARSLCLREGEHQ
VDDVSNTLKRFFRELEMGLFTAEDACTWLTTAAIQDESKKISQYQLLFSRLPRVNKATLQ
ALINHLYCVQRFSELNQMNLHNLAIVFGPTLFQTDGKDFSAGRVIEDLIQHYTLIFEVDE
QQLNKQLEEITVIIKVRETLNTKFPSTEPGGHFICTVYLEEKKETAEQHVKIPGSMTAAE
LTCEVLDRRNILAKDKEYWSCWEVSDKEEMERPLHYQERVLPILHSFGTDSHLLIKKHPA
MEMMMVYLASKVDASKHGIMKFREERSILGLGLSSGSFHDRYFILNSSSLRMYKEVRSNR
PERDWSVKNLKVYLGIKKKFRPPTCWGLTVVHESKKQEKPERQQWYLCCDIQSEMREWYA
TFLSIQYDGNVWPQNGLQQTRVSRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDPLAL
FRDVR
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactcacacacatcaatcatgtctcagactgattcctgtttgactgtgtgggac
tggttatgtgttcttcgtctggagcagtattccgaggcatttcggagtgaagggctggca
acgttaggacaatgtcgcaacctcacaccagatcagctggagcggatgggcatcaccctg
ccaggtcaccagagacgcatcctcgctagcctgaacaaaacacttggtaacagtgacaca
caatctgacacacactctcaccttctacagtctgagagagatcagagattggaggaaata
ggacatgccaaggtgttgcagagagagagacctgtgcctataccagtggaagaaaaacct
gtccctaaggaaagggagaaaagagatggagagacattaagacctacacccagggaaaga
gagaaaccagtccccagggagagacacatggccaagatgaaagaggaaagtggagaaggg
ggagagaagaagccagttcctggacaaagaaaaacagcagataggggaggaaaagaggaa
gagagggatggaggaatagatggagagaaggagaggcctgtgcctaaagaaagaactagg
tttcgctctagtgctccagtggactgtgacctcaactcacttgtctctccaacttcagac
acctctttaccccctgtccctccacgaagcacccccaactgccctccacagcgcttcacc
tctcccctgagcccctcacctcctgctcgaacccctgcctcccccaaactggacagacat
gcggttaaagccccagctgtacatagcagagctatatcccagagttccacccatgacccc
acacatgcacctctccaccctcccaacgtcccctctgccctaactcggcctcagacttta
gccattcagctacctgcccaacttttgggtagtgatggaggaagaaaaatctcacctgtt
tcccccacagcttcccacagcgatgacataaatgttccacctctccctccaaaagcaggg
gcagtacctaaaggccctccaccaatcccacaccggtttcctgcacagtctcccataaca
aacagcccctctcccaccaagacggtcgctgatgagatgcagaaagaccaaactccacag
gtcccacctcgcatcaggacaccccaaactctagaagacacacatcagtcaactcaacct
gacgctcagccggctctgcctgcaaggagagtcacccaacctccctatgagtccaggctg
gattcactcgattatgattcagatgaatacgaggatccagacttgtttttccccagcgtt
catcgaatgaacgcaccagacagggatatgtccctgcaagtgcccgccaagaaaaaggaa
cggtccacttctttgtacagtgatgacgagcagttggatgaggatgatcctagcccatgg
caggacgggggcatcgacaatcagcaaggaagtttctacctgccaaacactggcagactg
gctccagcccctaaagacgacagctctcagcttgccgctgtcatcaagaagggctggctg
gacaagaatccacctcagggggccctttattatcagagacgatgggtaaagctggatgtc
gactacctgagatactttgacaatgacaaggaggtgtattctaaggggatcatctctact
gccttcatcactaatgtgaccagtgtgggggagctgaagtttgaggtcgtcacaaacaac
cgaacatttatcttcagggctgaaagtgaaggcgagagaaacgactgggtgactgtactg
aaggactgcagcagggggcgctattggcgcagcaccatgaaccccagctcaccgttgact
ccggattatcagggctatctggagctcagagggttacgctccaaactttatactgttgtc
gcctcagataaagtcttcctctacaaaaccatggaggactatcgtctaggagtgggtatc
acatccatcgagatgaatgtaggaaatgttaaagacacagatcgccgtggctttgatctc
accacaccttaccgcatattcagttttatcgcagagtcagagcaactgcgagagcagtgg
gtggacgccatgcgggaagcgatagatgaggcgctgtcaaatagcgaggtggcagagcgg
atctgggcagagcctagcaacagcttctgtgccgactgtgaggctcccaagccggaatgg
gctgccatcaacttgtgtgtggtggtctgcaaacgatgcgcaggagagcacagaggactg
ggtccaagcatctcaaaggttcgcagtctgaagatggacaagaacatctggacagaggag
ctcatacaggtgttcctgttgctgggcaacaagcaggtaaacagtttttgggcagctaac
gtcccaccaagtgaagctttgacatcctctagctgcagcgaagagcgacggcgcttcatc
accaacaaataccgccagggcaaatacaggaagtaccaccctctgtacggaaaccaaaga
gagctcgataatgctctttgtataaatgtgcagtgcagtgatgtgctggagacgttaagc
ctgattttctgcggtgcagatgtaaattgtccaactggtgtagcaagttgtccctctgct
ctctccctggccaacgcacattcccaacctttacaggctgagttaattcgccacaatctc
aacacagagctaccacgatcagaggtgggcggaggcatggaggcagtacattactcacca
ccaccttgtgtgtcttacaatggcttcctgttcaagactgcatccatggctcgggccatc
acagagcgcaaggccagagaggagttcagtcggcgctggtgcacactgaatgattgcacc
ttcagctactatgagagtgacaagaactcgaaccctaacggagctctgaaggcttcagag
atagtctgtttggctgtcgacgcgcctgagaaacacgggtatgacagcacctttgaactc
tactcagagtcagagcgtctttatctgtttggcactgatgacccagacagccacaaggaa
tgggtcaagtctattgccaagagctttatcccagccactgcagagccactactgaggttg
gcttttgagcggattgggcggctgaagtgtaaagacggcttgaacctgcaaacatccaag
gttggttggtttgctctggtgggctccacacttcacgcctacctggaggacagcaaggga
gaggaaatccacctccgcaaactaaatgaactctcgattcaacaagacaatgaggtgctg
gttctggtggagagaggcagaactctgtacatagaaggagagaggaagttggattttgcc
ggctggtgtggggccatccaggcagcagcagggagtggaggagacacactgagccagcag
cagctgacagagacagacatacctgtcatagtacacagctgcattggctacatcacacag
tgcggcttgacctctgaggggatatatcgtaagagcggtgtgaactcccgtgtggcagcg
ttgtgcgagagatttcgccgtgatgctcgcagtctttgtctgagggaaggagagcaccag
gtggacgatgtctccaacacactcaaacgcttcttcagggagttagaaatgggactattc
acggcagaagatgcctgcacctggctcactactgctgccattcaggatgaaagcaagaaa
atctcccagtaccagctgttgttcagcagactgcctcgtgtaaacaaagctacactacaa
gccctaatcaaccacctctattgcgtgcagcgtttttctgagctgaaccagatgaacctc
cataacctggctatagtgttcggtcccacactcttccagaccgacgggaaggacttctct
gctggccgtgtgatagaggacctcatacagcactacacactcatctttgaggtggatgag
cagcagctaaacaagcagctggaagagatcactgttatcatcaaagtgcgagagacactc
aacacaaagtttcctagtactgaacctggggggcacttcatctgtacagtgtacctggag
gaaaagaaggaaacagcagagcaacatgtcaagatccctggttctatgacagcagcagag
ctgacctgtgaggtcctggaccggcgtaacatcctggctaaagacaaagagtactggagc
tgctgggaggtcagcgacaaggaggaaatggaacgtccactgcactatcaggagcgagtc
ttacccatccttcactcctttggcaccgactcccatctgctcatcaagaaacaccctgct
atggagatgatgatggtctacctggctagtaaagtggatgcatccaaacacggaataatg
aaattcagagaagagcgaagcatcttgggattgggactgtcttctggaagtttccacgac
cgatattttatcctcaattccagctctctcagaatgtacaaggaagtcagaagtaaccgt
ccagaacgtgattggtcagtgaaaaacctaaaggtctacctgggtattaagaagaaattc
cgtcctcctacatgttggggactgacagttgtgcatgagagtaagaaacaagagaagcca
gagagacagcagtggtatctctgctgtgacatccagtcagaaatgagggagtggtatgct
acttttctaagtatccagtatgatggcaatgtgtggcctcagaacggactccagcagaca
cgagtaagccgcgtgttgccggatacgcgtcatggtaatgtgtcactgataccgttgcgt
ggcagtgagaatgagatgcggaacagcgtggcagctttcagccaagacccgcttgctctc
tttagagatgttcgataa
DBGET
integrated database retrieval system
