Sander lucioperca (pikeperch): 116045570
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Entry
116045570 CDS
T07345
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116045570 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116045570 (trip12)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116045570 (trip12)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116045570 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
116045570
NCBI-ProteinID:
XP_031149138
Ensembl:
ENSSLUG00000016910
LinkDB
All DBs
Position
5:38344239..38391690
Genome browser
AA seq
2060 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ANSATGQSRGHSSRSRSGLTLSVASFVLQDEPEAAGTSEQERPGHQSKSEGTRGLKRSEA
PDQISTFGPTPAKKPKSLPPPRDNTSETKKGPAKSKKRSLASEPPASSGRGQSKKSGAAG
ASPIPKRKKADSLPGLSSAAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSSA
STSSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFE
WAARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFR
RSTRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGAS
ASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGA
SSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRM
FSLMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICEL
MPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKED
PELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHI
ASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKA
CPSGTASLCTTTISTASTTSANNATPELGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRT
AGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTAT
EQLNLQVDGGMECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLK
RFLHVFAGCPLPGMEPVSRLDPTENGPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGS
RGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRE
EDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEE
ERESTDDEANPLGRAGIWTKTHTIWYKPVREEEDGSKDAVGGKRGRAQTAPTKTSPRNAK
KQDELWHDGVCPSVINPLETYLTSEPPDTITFDDPSLEVNLLLRVLHSISRYWFYLYDNA
VCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFY
VTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSS
RAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEATKYMFS
SRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMS
ISSHDLVNIDPGVAKSIQHLEDVIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGL
DFTLPGYPNIELKKGGKDFAVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLH
HLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQR
LFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIE
IMREKLLIAAREGQQSFHLS
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcgcaggaaggttgcagtcagagcaagtcaaa
cataaagctaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccaactcagccactggtcagtccagagggcacagctcaagaagcagaagcggtcttact
ctgtccgtggcttcatttgtgttgcaagacgagccagaggctgcagggacatctgaacaa
gagcgaccaggccaccagtcaaagagtgaaggcacccgagggctgaagcgaagcgaagct
cctgaccaaattagtaccttcggaccgacccctgccaagaagcccaaatcgctcccacca
cccagagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagatcactt
gcttcagaaccacctgcatcgtcaggtcgaggccagagcaagaagagcggggccgctggg
gcctcaccaattccgaaacggaagaaagcggactccctccccggtctaagcagcgctgct
gggtccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaa
tcggccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctcatctgcc
tccacctcttcctcgtcctccaccacaggcaccaacagcgccaccacgcagggcgcccga
gttaaacagggaaaagatcagaccaaggcacgacgctctcgctcagcctcaagcccttcc
ccccgccgtagtacccgtgacaaggagcaggccaaaacagccagctcttcaaagtttgag
tgggcagcacgcttcaaccccaaagtcaacctgccaaagcccaaactttccttgcccgga
tcctccaaaactgagacctccaaacctgggccatcaggattacaagctaaactagcaagt
ttgaggaaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcgg
cggagcacacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggc
ctgggcaagcgcggggcagccgacgctcgccggcaggagaaaatggccgactctgacaac
aaccaggatggggccaactcgtcagccgctcgcactgatgaggcatcacaaggggcttca
gcttcaagctcggttgctggagctgtgggcatgaccacctctggagagagtgagtctgat
gactctgaaatgggaaggcttcaagccctactggaggccaggggtctccccccacatctt
tttgggcccctgggaccccgcatgtcacagctgtttcacaggactattggcagtggagcg
agctccaaggctcagcagctactacagggcctccaggccacaggtgatgagtctcagcag
ctccaagctgcgattgagatgtgccagctgctggtgatgggcaatgaggaaacacttgga
ggattccctgtcaagagtgtggtgcccgctttgattacactgttacaaatggagcataac
tttgatattatgaatcatgcctctcgtgcactcacatatatgatggaggcactccctcga
tcctctgctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccag
ttcattgacgtagcagagcaggccctgactgccctggagatgttgtcaaggcgacatagc
aaagccattttgcaggctggtgggcttgctgactgcctcctctacctagagttctttagc
atcaatgctcagaggaatgccttggccattgcagccaactgctgccagagcattactcca
gatgagttccactttgttgctgattctctcccactgttgactcagagactcacacaccag
gataaaaagtcagtcgaaagcacttgcctctgtttcgccagattggtagacaactttcaa
catgaggagaacctgctgcaggaggtggcgtcacgggacctgttgaccaacattcagcag
ctgctggtagtgacccctcctgttctcagctcggggatgtttatcatggttgtgcgcatg
ttttccctgatgtgctctaactgcccctgcctggcagtccagcttatgaaacagaacata
gcagaaactctgcgtttcctcttgtgtggtgcatcaaatggcagctgccaggagcagatt
gagctggtaccccggagcccccaggagctctatgaactgacctccctcatatgcgagctg
atgccctgcctgcctagagagggcatctttgcagttgatgtaatgctgaaaaagggcagt
gcccagacgacagagggagcgatctggcagtggagggatgaccggggactgtggcatcct
tacaaccgcattgacagccgcatcattgagacagcacaccagaacggggaggatgagatc
agcttgtcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagataaat
gaagacacaggaactgcacgtggtatccagaggaaaccaaatcctcttgccaaccctaat
acagggagtcaccaggaggttcgtcgagaagatgcacgagctcagttgatgaaggaggac
cctgagctggcaaagtgcttcatcaaaactctgtttggggtcttgtatgaagtgtacagc
tcatcggccggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctac
tttgctgatgcagagctattgaaggatgtgctgagaaaccatgctgtgtccagtcacatt
gcctcaatgctatccagccaggacctaaagattgtagtgggttctctgcagatggctgag
atcctgatgcagaagctgcctgatgttttcagtgtctatttcagaagagaaggtgtgatg
caccaggtaaagaatctgtcagagtctgagagctttctagtcactagtccgccaaaggct
tgccctagtggcactgccagtttgtgcactaccaccatcagcactgcatccaccacatct
gctaataatgcaactcctgagctgggctcacccagcttccagcacagcatggacgactca
ctggacctcagcccacaggggcggttaagtgatgtcctaaagaggaaacggctacctaaa
agagggcccagaaggcccaaatactctcccccaagagatgatgataaagtagacaatcaa
gccaagagccctactagtacgcagtcacccaaatcatccttcttggccagtcttaatcct
aaaacctggggcaagctgggtgcccagacgaacaatgccaactcagagccctcacgcaca
gcgggggtgagtggcctggcaagggcacctcccaaggactcaatttctaataacagagac
aaaataaaagcctggatcaaagaacaggcaagtaagtttgtggagcgctacttcaactct
gaaaacgtggatggcagcaaccctgcactgaatgtactccagagactttgcacagccact
gagcagctcaacctgcaggtggatggtggtatggagtgcctggtggagatctccagtatt
gtatcggagtctgacgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctc
ctggtctacctgacctccaacaccgacagggacttgctcagccgcgacgtgcggctcaag
aggttccttcatgtgttcgctggctgtccgcttccaggaatggagcctgtaagtcgtctg
gacccaacagagaatggtccgtacctggcactggtgcataaaatgaacagctgtctgagc
caaatggagcagtttcctgtcaaagtgcatgatttccccagtggcaacggcaatggcagc
aggggctctcaggcactgaaattcttcaacacacatcagctcaagtgtcagctgcagaga
cacccagattgcactaatgttaaacagtggaaaggcggccctgtgaagatagaccccctg
gccctggtgcaagccattgaaagatatcttgttgtcagaggatacggccgaatcagagaa
gaggatgaagacagtgatgacgacggttcagatgatgaaatcgatgaatcactggcggca
cagttcctgaactcgggcagtgtacgtcacagactacagttctacattggtgaccacctg
ctaccatacaacatgactgtataccaggctgtacggcagtacagtcttcaggcagaagaa
gaaagggagtcgacggacgatgaggcaaacccacttgggcgagctggcatctggaccaaa
actcacacaatatggtataagcctgtgagagaggaagaggatggcagcaaagatgctgtg
ggtggaaagcggggccgagcccagacggctcccaccaaaacctcacctcgcaacgccaag
aagcaggatgagctgtggcatgatggtgtgtgtcccagtgtcatcaatcccttagagacg
tacctcacttcggagccaccagacaccataacctttgatgacccctcattagaggtcaac
ctgctgctgagggtcctgcactccatcagtagatactggttctacttatatgataatgct
gtgtgtaaggaaatcatccctaccagtgagttcattaacagtaagctgacagccaaagct
aaccgtcagctacaagacccactggtcatcatgacggggaacatccctacttggctcatt
gagctcggaaagacgtgtcctttcttcttcccctttgacacccggcagatgctattctac
gtaactgcctttgatcgcgacagagccatgcaacgcctactggacacaaaccctgagatc
aaccaatcagattctcaggacagcagagttgcaccgcgtcttgacaggaagaagaggacg
ataaaccgcgacgagctgctaaaacaggccgagtctgtgatgcaggacctcggcagctcc
agggcaatgttagagattcagtatgagaacgaggttggcacaggtcttggccccactctg
gagttctacgctctggtgtctcaggagctccagcgggctgatctcggcctgtggaggggc
gaagaggtcacgctggccaatcctaaaggtagccaagaggcaactaagtacatgttcagc
tccaggggactgtttgctgttcccttcggcaggacaaccaaaccagcacacatagccaaa
atcaaaatgaagttccgtttcttaggaaagctaatggcgaaagccattatggacttcaga
ttgctggacctaccgctggggctgcccttttataagtggatgctacggcacgagatgtca
ataagctctcatgacctggtgaacattgaccccggtgtggcaaagtccatccagcacttg
gaggatgttatccgccagaaaaagaggctggaacaggacagatcacagacgagggagacc
ctacagcaggcactggagagcctgaacatgaacggctgctcagtggaggacctgggtttg
gacttcacccttccgggataccccaacattgagctgaaaaagggcggcaaagactttgca
gtcacgatctacaacctggaggagtacctcaggttggtggtgtactggactctaaatgaa
ggagtgtccagacaatttgagtcatttagggaggggtttgagtcagtcttccccttgcat
cacctgcagtatttctatccagaggagcttgaccagttgctgtgtggtagtaaatcagag
acatgggatgtaaagacgctgatggagtgctgtcgaccggaccacggctacacacatgac
agccgcgccgtacggttcctgtttgaggtgttgagcagctttgatgccgagcagcagaga
ctttttctgcagtttgtcacaggaagccccagactgcctgtcggtggttttcggagcctg
aatccccctctgacgattgtgaggaagacattcgagtcaacagagaacccggatgacttc
ctcccctcagttatgacctgtgtcaactacctgaagctgcctgactactccagcatagag
ataatgcgagagaaactgttgattgcggcccgcgagggccagcagtctttccacctttcc
tga
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