Sander lucioperca (pikeperch): 116045601
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Entry
116045601 CDS
T07345
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
sluc
Sander lucioperca (pikeperch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
116045601
NCBI-ProteinID:
XP_031149231
Ensembl:
ENSSLUG00000009488
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Position
8:complement(16655427..16668827)
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AA seq
738 aa
AA seq
DB search
MPPLPVPFFLTLLQLAVLTYVSAGAYYGHKQHPQPYQPMQHIQHMGKESFPQQPYLGKEV
PYMQYPHYRKELPQMPMHKGKENARKGGSYNGGQDKGQTIPSGAEGIPQGDRGPAGPPGP
EGPAGPPGPPGNGQPGPVGRPGPPGPPGGPGVGNPGLPGLAGKPGGNGENGPQGEMGPRG
EEGPAGQPGTQGPPGPPGLPGIGKPGVQGFPGQPGPKGEPGHKGLPGLPGLPGPKGDKGM
GQPGQPGHKGLPGSPGPAGPRGMPGFGKPGLNGAPGPQGPPGEKGHPGELGPAGPPGEGG
QPGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGLPGKPGLPGFGKPGLPGPKGDKGMG
GSPGLPGPKGDKGHGGLPGMLGPPGSNGPSGPPGPMGTPGGLGAPGPKGDCGEGGPKGLD
GAQGEPGPSGIPGKDGLPGENGEPGPRGPPGPSGAKGDSGHKGLPGIPGSTGLPGPKGQG
GLPGEVGPQGPKGIPGMDGTAGPIGPPGLPGTKGDRGLPGQPGIAGEGNLGLPGPIGPPG
KEGPSGPPGQPGQPGLPGPPGPPGLSDDMAGVLSVMGPGVDGVKAGSYGKKGKYGGNGAE
VMGASGLEMPAFTAVVTTPFPPVGTPVVFDKLLYNGRQNYNPETGIFTCDMPGIYYFAYH
VHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYIQLPSDQAAGL
YAGQYVHSSFSGYLLYPM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccttcctgtccccttcttcctgacactgctacagcttgcagtacttacttac
gtgagtgctggggcatactatggacacaagcaacaccctcagccataccagccgatgcag
cacatccaacacatgggcaaagaaagctttccccaacaaccataccttggcaaagaggtg
ccctatatgcagtatccccactacaggaaggagctaccccagatgcccatgcacaagggc
aaagaaaatgctcgtaaagggggtagctataatggtggccaagacaaaggtcagactatc
cctagtggtgctgagggaattcctcaaggagaccgaggcccagctgggccacctggacca
gagggacctgcaggacctcctggacctccaggtaatggacagcctggacctgtgggacga
cccggacctccaggtccaccaggagggcctggagtgggaaacccaggtttaccaggactg
gcaggcaagccaggaggaaatggtgagaatggaccacaaggagaaatgggccctaggggt
gaagaagggccagctgggcagccagggactcagggtcccccaggaccacctgggctacca
ggaataggtaaaccaggggtgcagggatttccaggccaaccagggcccaaaggagagcca
ggtcacaaaggtctgccgggactaccaggattaccggggccaaaaggagacaaagggatg
ggtcagccaggacaacctggtcacaaagggctcccagggtccccaggacctgctggccca
agagggatgcctggttttggaaaacctggcttgaatggggcaccagggccacaaggacca
ccaggagagaaaggacatcctggagagctaggaccagctgggccaccgggtgaaggagga
cagcctggcccaccaggtctacctggtcaaggaaagccaggtcaaaatggcctgccagga
caaccaggcatgccaggtgggaaaggtcatccaggaccgccaggtttgccaggaaagcca
gggcttcctggatttggtaagccaggactcccaggaccaaagggtgataaaggtatgggt
gggtcacctggacttccaggaccaaaaggagataagggccacggaggactacctggtatg
cttggaccccctggatcaaatggtccatcaggtcctccaggccctatgggaaccccagga
ggtttaggtgcacctggtcctaaaggagactgtggagaaggaggacctaaagggcttgac
ggagcacagggtgaacctggtccctctgggatacctggtaaggatggtctgcctggagag
aatggagagccaggaccgagaggtccaccaggaccaagtggtgccaaaggagacagtggg
cataaaggtctacctggtatacctggttctacgggacttcctgggccaaaaggacaaggt
ggattacctggtgaagtgggacctcaaggtcctaaaggaatccctggaatggatggcaca
gcaggaccaatcggacctcctggtcttccagggacaaaaggagatagaggactacctggt
caaccaggcattgcaggtgagggaaatctaggtcttcctggtcccataggacccccaggg
aaagagggcccatcaggaccccctggtcaaccagggcagcctggccttcctggaccacca
ggtccacctggtctgtctgatgacatggctggagtgctctctgtgatgggccctggagta
gatggtgttaaggctggtagttatggtaagaagggcaagtatggaggcaatggggctgaa
gtaatgggtgccagtgggttggagatgccagcatttacagctgtagtaacaactcccttt
ccccctgtgggcactccagttgtttttgacaagctcttgtataatggtcgccaaaactac
aaccccgagacaggtatcttcacctgtgacatgcctggcatttattactttgcctaccac
gttcattgcaaaggagctaatgtgtgggtggctttgatgaggaacaatgagccagtaatg
tatacatatgatgaatacaaaaagggtttcctagatcaagcatcagggagtgcagtacta
cctctacaacctggggacactgtgtatattcagctgccgtcagatcaggccgcaggactt
tatgctggacagtatgtgcactcctccttttctggttatttgttatatccgatgtaa
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