Sander lucioperca (pikeperch): 116045676
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Entry
116045676 CDS
T07345
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116045676 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116045676 (prpf18)
Spliceosome [BR:
sluc03041
]
Complex C
Other components
Step II factors
116045676 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
116045676
NCBI-ProteinID:
XP_031149343
Ensembl:
ENSSLUG00000008776
UniProt:
A0A8C9Y832
LinkDB
All DBs
Position
7:15436859..15443700
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AA seq
350 aa
AA seq
DB search
MDTLKAEILRKRKLIEDKQLVDGSKKFFKRSDLARMEQEDYFIRCGYKVQRETPESQIDK
KEDDEPSTSANPVLELELTEEKLPMTLSRQEVIRRLRERGEPIRLFGESDYDAFQRLRKI
EILTPEVNKGLRNDLKAAMDKIDQQYLNEIVGGTEPGEVDTQHDLKVHEENTTIEELEVL
GKTLGTGDDDGDQELIDKFLRFLLGVWAKDLNSREDHVKRSVQGKLASATHSQTESYLKP
LFRKLRKKSLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHART
GREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFTTVPSKCVEYNAL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatacactgaaagctgagatcttaaggaaaagaaaactcatcgaagacaaacagctt
gttgacggctccaaaaaattcttcaaaaggtctgatcttgcacgcatggaacaagaagat
tacttcataagatgtggatacaaggtacagagagagactcctgagagccagattgataag
aaagaagatgatgagccatccacctcagctaatccagtgttagaactggaactaacagaa
gagaagctgccaatgacactgtcgcgacaggaagtaattcgccggcttagggaacgaggg
gaaccaatccgactgtttggagagtccgattatgatgccttccagagactcaggaagatt
gagattctgacaccggaagtaaacaagggcttgaggaatgacctaaaagcagccatggac
aagattgaccagcagtacctaaatgagattgttggaggaacagagccaggagaagtggac
acacagcacgacctgaaagtgcacgaagaaaacaccactatagaagagttggaagttctt
ggtaaaaccctaggcacaggagatgatgatggagaccaggagcttatcgacaagtttttg
aggtttcttcttggtgtttgggccaaagatctgaacagccgagaggaccacgtgaagcga
agtgttcagggcaagctggccagcgcaactcactcacagactgagtcttacctcaaacct
ctcttcaggaagctcaggaagaagagtttaccagctgacatcaaagagtcaatcacagac
ataattaaattcatgttggagagagaatatgtcaaggcaaatgatgcctacctgcagatg
gccattggtaatgctccctggcctatcggtgtgaccatggtgggtatccacgcccgtact
gggcgagaaaagatcttctccaagcatgtggcccacgtgctcaacgatgagacacagaga
aaatacatccagggactgaagaggctaatgactatctgccagaaacacttcacgactgtg
ccatcaaagtgtgtggagtacaacgctctttaa
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