Sander lucioperca (pikeperch): 116045865
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Entry
116045865 CDS
T07345
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116045865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116045865
Transporters [BR:
sluc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116045865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
116045865
NCBI-ProteinID:
XP_031149668
Ensembl:
ENSSLUG00000013016
LinkDB
All DBs
Position
9:5300908..5341681
Genome browser
AA seq
2412 aa
AA seq
DB search
MDDCCLFFCLPMLSWEIRAIRLGVLLTCCRQRRESGQLGVIQSSFYLAQCFPLLQLVCEP
VSLDVVRLLYHSIRGLSQSDDPLQGQSCGAMKTGSQIRLLLWKNWTLRKRQKVRFLVEIC
WPVLLFVGLVWLRKANPLYQQHECHFPNKAMPSAGILPWIQGIFCNINNPCFRYPTRGES
PGVVSNYNNSVLARFYVDVQELLLNEEEVQQLGQLWHEMSSFSNFMETLRTNPSMVSGRG
LKIDDILKDDEVFTAFLLENANLPESIVYQLVNAEIRLEQFAFGIPELQLKDIACSQALL
ERFIIFPSRMGLHGVRNAMCALSQQRLQKIEDVLYANLDFYKIFKLMPKVMDSSSEGIDL
HFWGRVLNATSDKIRVLMERESSQELLKAVSSLFQAGDPSSFPQLMSTVSSLFCGYPEGG
GSRVLSFNWYEDNNYKVFLGVNGTKNHNYVYDDSASPSCNALMQTLESNPVTKIVWNSVK
PLLMGKILYTPDSPAVHKILKSANTTFEELERLQNMGKAWEELGPQLWTFFHNSVQMHMI
RDTLRNPTVMHFMDNSLEDTDFTTKHILNFLYNGPEEYRDADMPNFDWRNIFNIVDQIIR
TFNKYGECINLDKFVAYTDESQMTHQALYLLEENKFWAGVVFMDMFPWTTSVPPHVKYKI
RMDIDAVERTNKIKDRYWDPGPRADPIEDQKYIWGGFAYLQDMIEHGIIKTHTGKDWPLG
VYVQQMPYPCYVDDLFMITLNRCFPMFMVLAWIYSVSMTVKSIVLEKELRLKQTLKAMGV
NNGVIWYTAFIDSFIMMTASTALLTSIIMGGKVLNYSNPILVFFFLLTFTVATIMQCFLM
SVFFNKANLAAACSGIIYFTLYLPHILCSAWQDRITKNMKLAASLLSPVAFGFGTEYLSR
YEEQGLGLQWNNIMTSPLEKDTYSFLTSILMMVFDAVLYAVLAWYLDNVFPGQYGIGRPF
YFPFQSLYWQTSAPSHTEMADQAPEKPEPDNVEKDVEGRSTPETYTCNGSAGRKACKHQS
KRDQLERERELLRRQEKTPIQEEECQDLGREGQLFFETDPLGLVMGVQIQDLVKVFDGSS
RPAVNCLSINFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYINGSDIRTDMDTVR
SSMGMCPQYNILFKHLTVEEHILFYSLLKGRTQEEAAREVEDMLVDLGLPHKRNDEAQNL
SGGMQRKLSVAMAFVGGSKVVILDEPTSGVDPYSRRSIWDLLLKYRTGRTVILSTHHMDE
ADLLSDRIAIISKGQLHCCGSPLFLKNSFGVGFYLTLVRQMKDLKKKENDCDCASDCSCA
CSICTSYKDQSQNQSQQIDRVLDGDIDSISSLIHHHVPEATLIEMIGQELTYLLPSKGFK
HRAYASLFRELEETLADMGLSSFGISDTSLEEIFIKITADGEAANNASTPEQWMSRIKND
SKVGVEGDEEHNGVMQTNGITHGASDNSAGKGSRQVKGASLTLKQFHALLVKRFHHAIRS
QKDFLAQIVLPASFVLIALIFTKVVPPFGEYPSLTLTPWMYGQQFTFFSNEQPFDPKMKR
FTERLLNRPGLGTRCMEGEPLEMPCSNSTSEWENPDISPVVSNILQSPEWNQRNPSPSCQ
CSTSKKLTMMPICPIGAGGPPPRQRIEATGDTMLDLTNRNISDYLVKTYPSLIRTSLKSK
YWVNEQRYGGLSIGGQLPILDVNPEDIQDAFHQLGQMLNITAGYYSRLALRETGPFLRYM
ESEFNIKVWYNNKGWHAMVAFMNVANNAILRAFLHPSAKPVEFGITAINHPLNLTKEQLS
EVTVLTTSVDAVVAICVIFAMSFIPASFVLYLIQERATKAKHLQFVSGVSPSVYWVANFF
WDMVNYSLSTAMVVGIFMAFDKKCYTSPSNLPALITLLLLYGWSVTPMMYPMSYIFNIPS
TAYVSLSCINLFIGINSSAITFILELFENNQSLLTFNEWLKKGLLVLPHFCLGRGLIDMA
MNQAVTDVYARFGEEYTQNPFRWDFLGKNIAFMAVEGFVYFILNLLIQYRFFLDHWLSDY
KQTSTQDEDGDVAAERQRIYNGGSKTDVLQIRDLSKTYVGRKRAAVDRICVGVSAGECFG
LLGVNGAGKTTTFKMLTGDTDVSSGEATVAGYSIRTEILDVHQNMGYCPQFDAIDELLTG
REHLYLYARLRGVPESEIRRVAEWGIQKLGLTEYAGRCAGTYSGGNKRKLSTAIAMIGCP
ALVLLDEPTTGMDPHSRRFLWNAIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGTFK
CLGTIQQLKYKFGDGYVVTMKIKAVKVGLPPDLEPVESFLESSFPGCVQREKHYNTLQYE
IASSSLARIFQLVVANKERLSIEDYSVSQTTLDQVFVNFAKQQTGEDEDITLHRRTAGGR
KDIKISPVQRKT
NT seq
7239 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgttgtctttttttctgcctgcccatgttgagctgggagattagagcaatc
agattaggagtgctgctgacctgctgcaggcagaggagagagagtgggcagcttggagtt
atacagagctctttctaccttgctcaatgttttccactacttcagcttgtttgtgaacct
gtttccctagatgtcgtacgacttttatatcattccataagaggtttgtcacagtctgat
gaccccctccaggggcaaagttgtggagcaatgaagacaggctctcaaatccgcctgttg
ctgtggaaaaactggaccctccgcaagagacagaaggtccgcttcctggttgagatctgc
tggcctgtgttgttatttgttgggctggtgtggctgaggaaggccaatccactgtaccaa
caacatgaatgtcatttccccaacaaggccatgccttcagcagggattctgccctggatc
cagggcatcttctgcaacatcaacaacccctgcttcagatatccaaccagaggagagtct
ccaggcgttgtctccaactataacaactcagtattggcacggttctatgttgatgtccag
gagcttctgctcaatgaggaagaggtccagcagctcggccagctttggcatgaaatgtcc
tccttctcaaacttcatggaaacgttacgcaccaacccatctatggtgtcaggccgtggg
ctgaagatagatgatattctgaaggatgacgaggttttcacggccttccttttggaaaac
gcaaacctcccggagtctatagtctaccagctcgtcaatgcagaaatacgactcgaacag
tttgcctttggtatcccagagctgcagctgaaagacatagcctgcagccaggccctactg
gagcgcttcatcatcttccccagtcgcatgggactccacggggtccgcaacgccatgtgt
gccctcagccagcaaaggctgcagaagatagaggacgtcctctatgctaatctggacttc
tacaaaatcttcaaactaatgcctaaggttatggacagcagctctgaggggattgaccta
cacttctggggtcgggttctaaatgcgacgtcagacaagatccgagttctgatggagcgg
gagagctctcaggagctcctaaaggcggtttcttctctgtttcaagccggggatccctcc
tcattcccacagctgatgtccactgtgtcgagcctcttctgtggatacccagagggaggt
ggctccagggtcctgtccttcaactggtatgaggacaacaactacaaggtgtttctgggg
gtcaacggcaccaagaaccataactatgtctatgacgactctgccagtccatcctgcaac
gccctgatgcagaccctggagtccaaccctgtcacaaaaattgtgtggaattcagtcaag
cccctgctgatgggaaagattctgtacacccccgactcccctgccgtccacaagatatta
aagagtgccaacacaacatttgaggagttggagaggttgcagaacatgggcaaagcctgg
gaggagttgggacctcagctctggactttcttccacaacagtgtccagatgcacatgatc
agggacacgctgagaaacccgacagtgatgcacttcatggacaatagtctggaggacact
gacttcactaccaaacacattcttaactttctgtacaacggtccagaggaatacagggat
gcggacatgcccaactttgactggaggaacatttttaacattgtcgaccagatcatacgc
acgttcaacaagtatggagagtgcatcaatctggataagtttgtggcttacacggatgag
tcccagatgacccatcaggccttgtacctgctggaggagaacaagttttgggcaggcgtg
gtcttcatggacatgtttccgtggaccacaagtgtacccccgcatgtcaagtacaagatc
cgcatggacattgacgcagtggaacgcaccaacaagatcaaagacaggtactgggaccct
ggccccagagcagaccccatagaagaccagaagtatatctggggaggctttgcctacctg
caggacatgattgaacacggcattatcaagactcacacaggcaaagactggccactcggt
gtctacgtccagcagatgccatatccgtgctatgtagatgacctcttcatgatcacactg
aaccgctgctttcccatgttcatggtgctggcctggatctactctgtgtccatgactgtg
aagagcattgtgctggagaaggagctgcgcctcaaacagactcttaaagccatgggggtg
aacaacggagtcatttggtacacggctttcatcgacagcttcatcatgatgactgcaagt
acggcgctgctcacctctatcatcatgggtggaaaggtgctgaattacagcaatcccatc
ctagtcttctttttcctgctgactttcaccgttgccaccatcatgcagtgttttctgatg
agtgtgttcttcaacaaggccaacctggcagccgcctgcagcggcataatctacttcacc
ctctatctgccgcatatcctctgctctgcctggcaggaccgcatcaccaagaacatgaag
ttggctgctagcttgctgtctccagtggcctttggcttcgggacagagtacctgtcgcgg
tatgaggagcagggtttgggtctgcagtggaacaacatcatgaccagcccgttagagaaa
gacacctactccttcctcacctccatccttatgatggtgtttgatgctgtcctctatgcc
gtcctggcctggtatctggataatgtcttcccaggacagtatggcattggtcgaccattc
tacttcccatttcagtccttatactggcaaacatctgcaccctcacacacagaaatggct
gatcaagctcctgagaaacctgaaccagacaacgttgagaaggacgttgaaggcaggagc
accccagagacatacacctgtaatggttcagccggcaggaaagcctgtaagcaccaaagt
aagagggatcaactggagagagagagggagctgctgagacgacaagagaaaacaccaatc
caggaggaggagtgtcaggatttaggaagggaaggccagttgttctttgagaccgaccca
ttgggcctggtgatgggggtgcagattcaggacctggtgaaggtgtttgatggaagttct
cgtccagctgtcaactgtctcagcatcaatttctatgaaggccagatcacatccttcttg
gggcacaacggcgctggaaaaaccaccactatgtccatcctgactggcctgttccctccg
acatctggcacagcctacattaatggaagtgacataaggactgatatggacaccgtccgc
tcctccatggggatgtgccctcagtacaatatcctcttcaaacatctcacagtggaagag
cacatcctgttctactcactgctgaagggtcggactcaggaggaggcggcgagggaggtc
gaggacatgctggtggacctcgggctgcctcacaagagaaacgacgaggctcagaacctc
tcaggcggtatgcagaggaaactgtcagttgccatggcgttcgttggaggatcaaaggtc
gtgatcctggacgaacccacctcaggagtggacccctattccaggagatcaatttgggac
ctcctactaaaatacaggactggccggacagtgattctgtccactcatcacatggatgag
gctgacctgctgagtgaccgcatcgccatcatctccaaaggacaactccactgttgcgga
tctcccctcttcctcaagaacagttttggagttggtttctatttgacacttgtacggcag
atgaaggatctcaagaagaaggagaatgattgcgactgtgcctcagactgctcctgtgcc
tgctccatctgtaccagttacaaagatcagtctcagaaccagtcccagcaaatagacaga
gttctggatggagatatagatagcatctctagcctcatccaccaccacgtccctgaagcc
acattgatcgagatgattggccaggagttgacctacctgctccctagtaaaggcttcaaa
catcgagcgtatgccagcctgtttagggagctggaggagacgcttgctgacatgggcctc
agcagctttggcatctctgatacatcactagaggagatcttcataaagatcactgctgat
ggagaagcagcgaataatgcctccactcctgaacagtggatgtcacggataaaaaacgac
agcaaagttggtgtagagggagatgaagaacataatggtgtgatgcagactaatggcatt
acccatggtgcatcagacaacagtgcaggaaagggctccaggcaggtgaaaggggcctct
ctgaccttaaagcagttccatgcgctgctagtgaagaggtttcaccatgccataagaagc
cagaaagacttcctggcacagatcgtccttcctgccagttttgtcctaatagctctgatc
ttcacgaaagtcgttcctccattcggagaatatccaagtctgactctgaccccctggatg
tacggacaacagttcaccttcttcagtaacgagcaaccgtttgaccccaaaatgaaacgc
ttcaccgagcgcttactgaacagaccagggctggggacacgctgcatggaaggagagcca
ctagaaatgccctgtagtaacagcacatcagaatgggagaatcctgacatatctcctgtg
gtcagcaacatcttacagagtcctgagtggaaccagagaaacccgtctccttcctgccag
tgcagcaccagtaagaagctcaccatgatgcccatctgtcccatcggagcaggaggcccg
ccccctcgccaacggatcgaggccacgggagacacaatgctggacttgacaaacaggaac
atctctgactacctggttaaaacctaccccagtctcatcagaaccagtttgaagagcaaa
tactgggtgaatgaacaaagatatggaggtctgtcaataggaggacagcttcccatcctg
gatgttaaccccgaagacatccaggatgctttccatcaactgggacaaatgctcaacatc
acagcgggttactattctcgacttgcactgagggagactggtcctttcttacgatacatg
gaaagtgaattcaatataaaggtatggtataataacaaaggctggcacgccatggtagcc
ttcatgaatgtggccaataacgccattctgcgggccttcctacatccatccgccaaacct
gtggagtttggcatcactgccatcaaccaccccctaaacctcaccaaagagcagctttct
gaggtcacagtgttgaccacttcagtagacgccgtggtggcgatctgtgttattttcgcc
atgtccttcatccctgccagcttcgtcctctacctcatccaggagcgtgcgaccaaggcc
aagcatctgcagtttgtcagcggggtcagcccttcagtgtactgggtagccaacttcttc
tgggacatggttaactactctctcagcactgccatggtggttggcattttcatggctttt
gataaaaagtgttacacatcaccatccaacctgccagcattgataacactgcttctactg
tatgggtggtcggtgacgcccatgatgtaccccatgtcctatatattcaacatcccaagt
actgcgtatgtgtctctgtcctgcatcaacctgttcataggcatcaatagcagcgccatc
accttcatcctggagctttttgaaaacaatcagtctttgctgacattcaatgagtggcta
aagaaaggcctgctggtgctacctcacttctgcctggggcgaggactgatagacatggcc
atgaaccaggctgtgactgatgtttatgccagatttggcgaagagtacacacagaaccct
ttccggtgggactttttggggaaaaatattgctttcatggcagtggaaggctttgtctac
tttattctcaatcttctcatccaataccggttcttcttggaccactggttatcagactac
aagcagacttcaacacaagatgaggatggtgacgtggcagcagagaggcagagaatttat
aatggagggagcaagacagacgtcctgcagatcagagacctctctaagacgtatgtgggc
aggaagagggcagctgtggaccggatatgtgtgggagtctctgcaggagagtgctttggt
cttttgggagttaatggagctggaaagacgacaaccttcaaaatgctgactggtgacaca
gatgtcagctccggtgaggctactgtggctggttacagcatccggacagagattctggac
gtgcaccagaacatgggctactgcccacagtttgatgccatcgatgagctcctaaccggc
agggagcatctgtacctttacgctcgtctcagaggggtacctgagtctgagatccgcaga
gtggcagagtggggtatccagaagctgggtctgacagagtatgccggccgctgtgcaggg
acatacagtggcggcaacaagcgcaaactctccacagctattgcaatgattggttgccca
gcactggtgctgctggatgagcccacgacggggatggacccccactctcgacgcttcctg
tggaatgccatcatgagtgtcatccaggacggcagggccgtggtgctaacatcacacagt
atggaggagtgtgaggccctctgcactcgactggccatcatggtcaatgggactttcaag
tgtctgggtaccatccagcaactcaaatacaaatttggtgacggctacgtagtgaccatg
aaaatcaaggcagttaaagtgggcttgcccccagatctggagcctgtcgagagcttcttg
gagagcagcttccccggctgcgttcagagagagaagcactacaacacgctgcagtacgag
atcgcctcctcctccctggccaggatatttcagctggtggtggccaataaagaaaggctc
agcatcgaagactactctgtttcccagacaacgctggaccaggtgtttgtcaactttgcc
aagcaacagacaggcgaggacgaagacattacattacacagacgaacagcgggtggaaga
aaagacatcaagatctctccagtgcagaggaaaacatga
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integrated database retrieval system
