KEGG   Sander lucioperca (pikeperch): 116045875
Entry
116045875         CDS       T07345                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116045875 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116045875 (ndc1)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116045875 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup TPP_enzyme_C
Other DBs
NCBI-GeneID: 116045875
NCBI-ProteinID: XP_031149684
Ensembl: ENSSLUG00000013606
UniProt: A0A8D0D3G4
LinkDB
Position
9:complement(5703185..5727862)
AA seq 669 aa
MLSAEQSCWFVRKVIFWRAVASIAWAVLLLPPITAVFVIISRFSLLHPIQAVSECLSFLT
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFVNSLGHCIMGI
IVAWCCAITVGGRYETIADPCAQGDGSPQMCLNEYHLILLLAGAFVGFSHSLLGVIYNMN
YVSFHTVQQYKYLRFKGSLSLVLKCSATQALYSVRNYIVVYFFLGYIPKAWICKTLNLHL
NSSVHPLDSIAGLLDLSLLYHLWISASFLLFTWHLTLLLFRVFVTEVYSFPVQSSFTEDA
HQCLPTVLTDKQPMILKFLALLDLALLSQHSPSRRSEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLIAYHDTVATNGRAKSLSTGSERKTSSESSVTSGTEDLMSPRPTLLMKTPAS
VFARSIVGCPQSPLTAPFTPDLDSPFASPALRRLTAPMDQCSPWFGTVQSPHIMRRVPKL
WSTSTDSQVNGSPLASPASVPSPKQEPSKPSLLAQFLQNRKEQVKNVLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQSSFSEDQFGVVQTALPSILSCMLGLQEAVDRH
FKLPHASSKPVRSASSMGDSTHKTLRFALRATLKTSIYRITTTFGNHLNAVKMSAEHRKR
LQQFLEYKE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgctttctgcagagcaaagttgttggttcgtccgcaaggtgatattctggagagctgtg
gccagtattgcttgggctgtcctgttgttgccacccatcacagccgtttttgtaatcatc
agcaggttcagtctgctccaccccatccaggcggtatcagaatgcctgtccttcttaacg
agtgcaagtgccatcttctccttcattctgctgtgtggagtgatcatcatggtagggttc
ctgaacctggagtattatacagtcatcccaaccattgcatgctcaaaaattgccctgttg
ggtcagctgctccaccctcgtcagtttgtcaactccctgggccactgtatcatgggaata
atcgtggcttggtgttgtgccatcaccgtcgggggcagatatgagacaatcgctgaccct
tgcgcacagggtgatggttccccccagatgtgcctgaatgagtatcacctcatccttctg
ctggctggagcctttgttggattctctcacagtctgctgggtgtgatctacaacatgaac
tatgtttcttttcacactgttcagcaatacaaataccttcgctttaagggatccctatct
ttggtgctgaagtgtagcgccactcaagcactttactctgtcaggaactacattgttgtg
tatttctttttgggatacattccaaaagcatggatttgtaagacactgaatcttcatttg
aacagctctgtccaccctcttgacagcatagctggactgctggacctgtccctgctctac
cacctgtggatcagcgccagcttcctcctcttcacatggcacctcacgctgctgctcttt
agggtctttgtcactgaggtgtacagctttcctgtgcagtcatcgtttactgaggatgcc
caccagtgtcttcctacagttctgactgacaagcagccaatgatattaaagtttctagct
ctgctggacttggctctgctgtctcaacactccccatcaagacgcagtgaggtcttcagt
ctgagtcagccaggtggccatccccataactggaacgccatcagtaaggagtgtctgtct
ctgctggctgatctgactcagagactcatagcctatcatgacactgtagcaaccaatggc
agggctaaatcactgtccactgggagtgagaggaagacttcatctgagtcatcagttacc
tcgggtacagaagatcttatgagcccgaggcctactttactgatgaaaactccagcttcg
gtctttgcacgctccattgttggctgcccacagagccctctgacggcaccattcactcct
gacctggacagcccctttgcttcccctgccctgcgtcgtcttactgctcctatggaccag
tgctcgccgtggttcggcacagtgcagagcccacacatcatgaggagagtcccaaaactc
tggtccacctccacagattcacaggtcaatggcagtcccctggcttcccctgcctcagtt
cccagtcccaagcaggaaccgtccaaaccaagtctcctggctcagttcctccagaacaga
aaagaacaggttaaaaatgtcttggcaaagcgcgtgctgataatgtatttgtttaacaag
cttccagaggcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaagggctgtcttaccttgttcaatcctccttctcagaagaccagtttggggttgtacag
acagcattacccagcattctcagttgcatgctgggcttacaagaggcagtagatcgtcac
ttcaagctgcctcatgcctccagtaagccggtcaggtcggccagcagcatgggagactct
actcacaaaacactgcgctttgctctcagggccactctcaagacttccatctacaggata
acaactacttttggaaatcacttaaatgctgttaagatgtctgcagagcaccggaaaaga
ttgcagcagtttctggagtacaaggaataa

DBGET integrated database retrieval system