Sander lucioperca (pikeperch): 116045875
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Entry
116045875 CDS
T07345
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116045875 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116045875 (ndc1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116045875 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
116045875
NCBI-ProteinID:
XP_031149684
Ensembl:
ENSSLUG00000013606
UniProt:
A0A8D0D3G4
LinkDB
All DBs
Position
9:complement(5703185..5727862)
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AA seq
669 aa
AA seq
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MLSAEQSCWFVRKVIFWRAVASIAWAVLLLPPITAVFVIISRFSLLHPIQAVSECLSFLT
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFVNSLGHCIMGI
IVAWCCAITVGGRYETIADPCAQGDGSPQMCLNEYHLILLLAGAFVGFSHSLLGVIYNMN
YVSFHTVQQYKYLRFKGSLSLVLKCSATQALYSVRNYIVVYFFLGYIPKAWICKTLNLHL
NSSVHPLDSIAGLLDLSLLYHLWISASFLLFTWHLTLLLFRVFVTEVYSFPVQSSFTEDA
HQCLPTVLTDKQPMILKFLALLDLALLSQHSPSRRSEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLIAYHDTVATNGRAKSLSTGSERKTSSESSVTSGTEDLMSPRPTLLMKTPAS
VFARSIVGCPQSPLTAPFTPDLDSPFASPALRRLTAPMDQCSPWFGTVQSPHIMRRVPKL
WSTSTDSQVNGSPLASPASVPSPKQEPSKPSLLAQFLQNRKEQVKNVLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQSSFSEDQFGVVQTALPSILSCMLGLQEAVDRH
FKLPHASSKPVRSASSMGDSTHKTLRFALRATLKTSIYRITTTFGNHLNAVKMSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcagagcaaagttgttggttcgtccgcaaggtgatattctggagagctgtg
gccagtattgcttgggctgtcctgttgttgccacccatcacagccgtttttgtaatcatc
agcaggttcagtctgctccaccccatccaggcggtatcagaatgcctgtccttcttaacg
agtgcaagtgccatcttctccttcattctgctgtgtggagtgatcatcatggtagggttc
ctgaacctggagtattatacagtcatcccaaccattgcatgctcaaaaattgccctgttg
ggtcagctgctccaccctcgtcagtttgtcaactccctgggccactgtatcatgggaata
atcgtggcttggtgttgtgccatcaccgtcgggggcagatatgagacaatcgctgaccct
tgcgcacagggtgatggttccccccagatgtgcctgaatgagtatcacctcatccttctg
ctggctggagcctttgttggattctctcacagtctgctgggtgtgatctacaacatgaac
tatgtttcttttcacactgttcagcaatacaaataccttcgctttaagggatccctatct
ttggtgctgaagtgtagcgccactcaagcactttactctgtcaggaactacattgttgtg
tatttctttttgggatacattccaaaagcatggatttgtaagacactgaatcttcatttg
aacagctctgtccaccctcttgacagcatagctggactgctggacctgtccctgctctac
cacctgtggatcagcgccagcttcctcctcttcacatggcacctcacgctgctgctcttt
agggtctttgtcactgaggtgtacagctttcctgtgcagtcatcgtttactgaggatgcc
caccagtgtcttcctacagttctgactgacaagcagccaatgatattaaagtttctagct
ctgctggacttggctctgctgtctcaacactccccatcaagacgcagtgaggtcttcagt
ctgagtcagccaggtggccatccccataactggaacgccatcagtaaggagtgtctgtct
ctgctggctgatctgactcagagactcatagcctatcatgacactgtagcaaccaatggc
agggctaaatcactgtccactgggagtgagaggaagacttcatctgagtcatcagttacc
tcgggtacagaagatcttatgagcccgaggcctactttactgatgaaaactccagcttcg
gtctttgcacgctccattgttggctgcccacagagccctctgacggcaccattcactcct
gacctggacagcccctttgcttcccctgccctgcgtcgtcttactgctcctatggaccag
tgctcgccgtggttcggcacagtgcagagcccacacatcatgaggagagtcccaaaactc
tggtccacctccacagattcacaggtcaatggcagtcccctggcttcccctgcctcagtt
cccagtcccaagcaggaaccgtccaaaccaagtctcctggctcagttcctccagaacaga
aaagaacaggttaaaaatgtcttggcaaagcgcgtgctgataatgtatttgtttaacaag
cttccagaggcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaagggctgtcttaccttgttcaatcctccttctcagaagaccagtttggggttgtacag
acagcattacccagcattctcagttgcatgctgggcttacaagaggcagtagatcgtcac
ttcaagctgcctcatgcctccagtaagccggtcaggtcggccagcagcatgggagactct
actcacaaaacactgcgctttgctctcagggccactctcaagacttccatctacaggata
acaactacttttggaaatcacttaaatgctgttaagatgtctgcagagcaccggaaaaga
ttgcagcagtttctggagtacaaggaataa
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