Sander lucioperca (pikeperch): 116045915
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Entry
116045915 CDS
T07345
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116045915 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116045915 (arhgef18a)
Membrane trafficking [BR:
sluc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116045915 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
COG3_N
Motif
Other DBs
NCBI-GeneID:
116045915
NCBI-ProteinID:
XP_031149776
Ensembl:
ENSSLUG00000024303
LinkDB
All DBs
Position
9:6622037..6643954
Genome browser
AA seq
993 aa
AA seq
DB search
MTVTPKKHSAQPGSSSYNDTSPRSDMDEVEGLRLKLSSEDSVSLAEPINLEDSHYALLQG
ELESDQQNLEAESWNVAVDQNYLKALNKEAVKRQDVIYELIQTEMHHVRTLKILLRVYLH
ELRQSLLIEEARLERLFAGVETLLNLHQHFLNCLKLRQKTSQEEGSPSNYQITHLGDILI
SQFSGPLGEGMMECYSVFCGHHNEAIAFYKEQLQNNKKLQVLARKIGQLPLVRRLGVPEC
FLLVTQRITKYPVLVERIIQNTEADTDEYKSLVQGLVLIKDTINQVNAQVSEYEKAARLK
DIGLRLEPKSQGRLKDGRQLRKEDLLQGNRTLLHEGTVTWKASGRQKDIHAVLLSDVLLL
LQEKDHKLVFAAVDNKPPVISLQRLIVREVAHEDKAMYLICACTTSMPEMYEIHTRSIEE
RITWTRLIREAVNCYPEEEQYRELTAKLQQFQDILKVRDDQIKQILTEKQQIFAALYETT
TEQETPHKGLLLRGDATDLQQGATLLKGAIDEAENLQTLLFLWIRDPNLLDEGKMQGGLR
RAETFGVADGNPGASAMKNGDGDAGGSEGSPSTSDPQLQESYSSESLEQLADDNTQMPDC
SLSSSHFPEVEVCDRVILLAQRLYSLEAIITHQDSQIELQHAFQTKSKQPARHYSSVLLE
QEKQRNWEKQKEELASLHKLQAQFQEEQQRWEKERERQRIQIETLEARLQQREEDCREWE
EKLKEEKAELERLKDDYQQDLERLRESTQSVDKNKERLNQERERLEQLQEKIKKYIPVHI
NYDDPTQHWPLSSYQSFRGSIVNGGGTLDLKHHILPTNSNSMETPPKVPPRRESINPLPA
KPELPVHLISTTNQVHKPAAVQQKIPTKLAAQSKGKEKGFKKKGSHQRTHSAAGIDVNQV
LPIRVTGKEGGSLRAKRNGSPQRIYLSGAFNPPGSMRSIKTSQSFSTHKRSSNESPPPPL
PPPFPKDVLKTSTPPPPFPKDVPKTSKDKEIFL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacccctaaaaaacacagtgctcagcctggttcctcctcttacaacgacaca
agtcccagatctgatatggatgaggtcgagggcctgcggttgaagctctcctctgaggac
tctgtgtcgctggctgagcccatcaacctagaagattcccattatgctctgctgcaaggc
gagctggagtccgaccagcaaaacctggaggcggagtcgtggaacgtggctgtggaccag
aactacctgaaggcccttaataaagaggctgttaaaaggcaggacgtcatctatgagttg
atccagacggagatgcaccatgtacgcaccttaaaaatccttctccgtgtctacttgcac
gagttaaggcagtctttgctgatagaggaggccaggctggagcgactctttgctggggtg
gaaaccctgctcaacctccaccagcacttccttaactgcctcaaactgcgccaaaagaca
agtcaggaggaaggaagcccaagcaactaccagatcacacatctgggggatattctcatt
tctcagttttcaggaccactgggagaaggaatgatggagtgttacagtgttttttgcggt
catcacaatgaagctatcgccttctacaaagagcagttgcagaataacaagaaactgcag
gtccttgctaggaaaataggacagctgcccctggtgcgaaggttgggagttcctgagtgt
tttctgttggtgactcaacgcatcacaaaatatcccgtcctggtagagcgaatcatacag
aacactgaagctgacacagacgagtacaagtctctggtacagggtctggtgctgatcaaa
gacaccatcaaccaggtgaacgctcaggtcagtgaatatgagaaagccgctcgtctgaaa
gacatcggcctgcgtctggagccaaaatctcagggccggctgaaggacggccggcagctc
cgcaaggaggatctgctccagggaaacaggacgctgctgcacgaaggcaccgtcacctgg
aaggcctccggtagacaaaaagacatccatgctgtgctgctgtcagacgtgctccttctc
ttacaagagaaagatcataagcttgtatttgctgctgtggataacaaaccaccagtgatc
tcccttcaaaggctgatcgttagggaagtggctcatgaggacaaagccatgtaccttatc
tgtgcatgcactactagcatgccggagatgtacgagatccacacacgctccatagaggaa
cgcatcacatggacgaggctgatacgggaagctgtgaactgttatcctgaagaggaacag
taccgtgaactgactgcgaaacttcaacaatttcaagatattctaaaggtaagggatgac
cagataaagcaaattctgacagagaagcagcagatctttgctgctctctacgagacgacg
acggagcaggaaaccccccacaaagggctgctgctccgaggagatgccactgacctccag
cagggggcgacactgctcaaaggagccatcgatgaggcggaaaacctgcagaccctgctc
ttcttatggataagagacccaaaccttttggatgagggtaagatgcagggggggctcagg
agggccgagacctttggagtggctgatggtaacccgggtgcaagcgccatgaaaaatgga
gatggagatgcaggtggcagcgagggtagtccctccactagtgaccctcagctccaggaa
agttacagctctgagagcctggaacagttggctgatgacaacacacagatgccagactgc
agtttatcctccagtcattttcctgaggtggaggtgtgtgacagggtgatactgctcgca
cagaggctgtacagcttggaagcaatcatcacccatcaggacagccagattgagctgcag
catgcttttcagacaaagagcaagcagcccgctcgtcattacagcagtgtgctgctcgag
caggagaagcagcgcaactgggagaagcaaaaggaggaacttgccagcttgcacaagctg
caggcccagtttcaagaggagcagcagcgctgggagaaggagagggagcggcagaggata
cagattgagactctggaggctcggctgcaacagagggaggaggactgccgagagtgggag
gagaagctcaaggaagagaaggctgagctggagaggttgaaggacgactatcagcaagac
ctggagaggctgagggaatccacacaatcggtagacaagaacaaggagcgtctgaatcag
gagagggagcgcctagagcagctgcaggagaaaataaagaagtacatcccagtacacatc
aactatgatgatcctacacaacactggcctctttccagttaccagtcgttcaggggaagc
atagtgaacggaggtgggaccttggatctaaagcaccacatcttgcccaccaactccaac
tccatggaaactcctccaaaggttccaccgcgcagggagagcatcaatcctctgccagcc
aagcccgagctgccagtccacctgatcagcaccaccaaccaggtgcacaaacctgctgcc
gtgcaacagaagatccccaccaagctggctgctcagtccaagggaaaggagaaaggtttc
aagaagaaagggtcccaccagagaacgcacagtgcagctggtatagacgtgaaccaggtg
ctgcccatccgagtgaccgggaaagaaggaggcagtctgagagccaaaaggaacggcagt
ccccaaagaatctacctgtcaggtgccttcaacccaccaggatctatgcgcagtataaaa
acgtctcagtcctttagcacacacaagaggagcagcaacgagtctccaccaccgccgctg
cctcctccttttcccaaagatgttctcaaaacaagcacgccgcctcctccttttcccaaa
gatgttcccaaaacgagcaaagacaaggaaatattcctttaa
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