Sander lucioperca (pikeperch): 116045948
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Entry
116045948 CDS
T07345
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116045948 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116045948 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116045948 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_3
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
116045948
NCBI-ProteinID:
XP_031149843
Ensembl:
ENSSLUG00000002190
LinkDB
All DBs
Position
9:complement(7631029..7655293)
Genome browser
AA seq
1509 aa
AA seq
DB search
MSGSVQVTQKLQHQQHQQQQQQQQHHYESSCHLSTKSSVSQQSFSTYKTSSRRLQTTVKT
EKGKEVVKLSPLPKRAKRTYLAMDTDKEVIGYVIPVFRASHEVVRGLTEAQEEDVTEEGI
NYVAMRNLFVREAREAMEVKVEKRTRTTHIRESAERMELGKTMEEWAEFRKKMNPDSLTH
RPEFIVKPRGQTVWEGKTVKLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYAVESNYNMH
SLEIKNCDFIDTAQYHVSALNVKGEVSSVATIVVKRFQEGKEAGPLDPKPHGFCAEHGVT
FETTIIDKFEVAFGREGETLSLGCTVIVYPTVKKYQPEVVWYRNSVPLKPSKWVHTHWSG
ERATVTLVHLNKEDEGMYTLRVNTKSGFDTYSAYVFVRDADVEVEGVPVAPLDVRCHDAN
KDYVVVTWKQPAVEGSSSILGYYIDRCEVGTHHWAQCNDSPVKYARFPVTGLVEGRSYIF
RVRALNKEGVSRPSRVSEAVVAMDPSDRARLRAGPSAPFTGMIKFTEEDPTVGVVPGEPC
DVVVTEATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTDIWQRVNTGMPVKSPRFALFDL
AEGKSYSFRVRCCNSAGVGEASVSTGEITVGDKLELPSAPGNPVATRNTDTSVVVIWGAS
QVKHLVGYYIEYTVVGTDKWMPCNNKPVKQTRFVCHGLTTGTNCVFRVKAVNAAGYSQSS
PDSDAVVVQAAISVPGKPTGVSLVEAVKDYMVLFWTAPASTGGADIRGYFVDYRTVKGDV
VGKWHEMNHKALTTTSYKAENLKENVFYQFQVRAMNMAGVSKASLASAALECKEWTITVA
GAPVGLHVLEVRDTSVVVLWEPPAFNGRTPVNGYYLDVKKASAGEEGWKAAHEKANKMKY
MKVTGLKAGTSYVFRVRAQNLAGVGKPSAVLGPILAQTHPGTKEIYVDVDDDGVISMIFE
CSEMKEGSEFVWSKNYQTITDTSRLTIITEQGKSRAIFNSPSLEDLGIFSCVVTNTDGIS
SSYTLTEEGLKRLLDISHDHKFPVIPFKSEMAMDLLEKGRVRFWTQVEKCTSACQVEYIF
NDVIITEGQKYTMNFDKSTGIIEMFMDSLEITDEGTFTFNLVDGKAKGTTSLVLIGDEFR
ELQKKSEFERAEWVRKQGPHFVEYLDFTVTPECNVLLKCKIGNVRPETEITWSKDSIEIA
EDDEDAQKIERKDVDLTFNIGKWVIKQEKPKEKGKKPTAEDVPPPPRPKISKADAGIYEV
FLRDDRGKDKSTFNLTDAGYQAVMNELFRVIANSSSEITVVSTEHGIILSSMVTYYNEEL
RVGWLQKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVFDLTG
KAWEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPVPEVSWTK
NDRELVSDERYKLKFEHGKFASITIAAVTTTDSGKYALLVKNKYGTEAGEFTVSVYNPEE
EENKEEKKG
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtacaagtgacgcagaagctgcagcatcagcagcatcagcagcagcag
cagcagcagcagcatcactatgagagcagctgtcacctaagcaccaagtcgtctgttagc
cagcagtcgttctccacttacaagacctccagccgtcgcctgcagaccactgtgaagaca
gagaaggggaaggaggtggttaaactgagcccgctacccaagagagccaaacgcacctac
ctggcaatggacacagacaaggaagttatcggctatgtcattcccgtatttagagccagt
catgaagttgtccgtggtctgacggaggcccaggaggaggacgttactgaggaggggatt
aactatgtggccatgaggaacctgtttgtcagggaggccagggaggctatggaggttaaa
gtggagaagagaacaagaacaacgcatatcagggaatctgccgaacgcatggaactaggc
aagacgatggaggagtgggcagagttccgtaagaaaatgaacccagacagcctgacacac
cgtccagagtttatcgtaaagccccgtggacagactgtctgggagggcaagactgtcaag
ctgcactgcacagtggctggatggcctaaacccaggattgcctggtacaaaaacaatgtg
ctcattgatgccaaggctcaccccgagaagtacgcagtcgagagcaattacaacatgcac
tccctggagatcaagaactgtgatttcatcgacactgctcagtatcacgtctctgccctc
aacgtgaaaggggaagtttcctctgtggctactattgttgtcaaaaggttccaggagggc
aaggaagcaggcccactcgatccaaaaccacatggtttctgcgctgagcatggtgtcacc
tttgaaacaaccatcattgacaaatttgaagtggcttttggccgtgaaggcgagacattg
agtctgggctgcactgtcatcgtttatcccaccgtgaaaaaataccagcctgaagtcgtc
tggtacagaaactctgtccccttgaagccctctaaatgggtacacacacactggtctggc
gaacgtgccacagtaacacttgtccacctcaacaaggaagatgagggcatgtacaccctg
cgcgtcaacaccaaatctggctttgacacctactctgcttatgtgtttgtcagagatgcc
gatgtggaggtggagggggttcctgtggcccccctggatgtgcgctgtcatgatgccaac
aaggactatgtggtggtgacctggaagcagccagcggtggagggcagcagctccatcctg
ggatactacattgacaggtgcgaggtgggcactcaccactgggctcagtgtaatgactcc
ccagtgaagtatgcgcgcttccctgtcacaggactggttgaggggcgttcttacatcttt
agggtgcgggccttgaacaaggaaggagtcagccgtccgtcccgtgtctccgaggccgtg
gttgccatggatccctccgacagagcccgtctacgagctggcccctcagctccttttact
gggatgatcaagtttacagaggaggatcccactgtgggtgttgtccccggagaaccctgt
gatgttgtggttaccgaggcaaccaagagctacgtggtgcttgcctggaagcctccagtt
caaaggggtcatgaaggagtcatgtattacattgagaagtgtatttcagggacagacatc
tggcagagggtgaacactggtatgccagtcaagtctccccgctttgccctgtttgacctg
gcagaggggaaatcttacagcttccgtgtgcgctgctgcaactccgctggcgttggcgaa
gcctctgtatccacaggagagatcacggtcggtgataaactggaactgccctcagctcca
ggcaatccagtggccaccaggaacactgacacctcagtggtggtcatctggggggcctct
caggtcaaacacctggtcggctactatattgaatataccgtggtgggcactgataagtgg
atgccttgtaacaacaaacctgtcaagcagaccaggtttgtgtgccacggcctgactacc
ggaacaaactgcgtgtttagggtcaaggcagtcaacgctgcaggttacagccagagctcc
cccgattctgatgctgtggttgtgcaggctgccatctccgtcccgggaaagcccactggt
gtgagcctggtggaggctgtaaaggactacatggtgctgttctggactgcgcctgctagc
actggaggagccgatatcaggggatattttgtggactacaggaccgtgaagggagacgtt
gttggaaaatggcatgaaatgaaccacaaggctttgactactacctcctataaagctgaa
aacctgaaggagaacgtcttctaccagttccaggtccgcgctatgaacatggccggcgtg
agtaaagcctctctggccagtgcagctctggagtgcaaggagtggaccattactgtggca
ggtgctcctgttggtcttcatgtgctggaggtccgtgacacctctgtcgtggtcctgtgg
gagccacctgcatttaatggccgcactcctgtcaatggctactatttggatgtcaagaag
gcctctgctggagaggaaggctggaaggctgctcatgagaaggccaacaagatgaaatac
atgaaggtgacagggctgaaggctggtacatcctacgtcttccgtgtgcgtgctcaaaat
cttgctggagttggaaagccctcagcagtcttaggtccaatcctggcccagactcaccct
ggcaccaaagagatttatgtggatgtcgatgatgatggtgtgatctctatgatctttgag
tgctctgaaatgaaggagggctctgagtttgtttggtccaagaattaccagactataaca
gacacctctcgcttgactattatcactgagcagggcaagtccagagctatcttcaacagt
ccctccctggaggatctgggcatattctcctgtgtggtcaccaacactgacggcatctcc
tccagctacacactcactgaggagggtctcaagcgtcttctggacatcagccatgaccac
aagttccctgttattccctttaagagtgaaatggccatggacttgctcgagaagggtcgc
gtgcgattctggactcaggtggagaaatgcacttccgcctgccaagtggagtatatcttt
aatgatgtcatcattactgagggacagaaatacacaatgaactttgacaagtccaccggc
atcattgaaatgttcatggactctctggagatcacagatgagggaacgttcacctttaac
ctggtggatggcaaggctaagggtacaaccagtctggtgctcattggagatgagttcagg
gagcttcaaaagaaatccgaatttgaaagggcagaatgggtcaggaaacaaggtcctcac
tttgtcgagtacctcgacttcactgttactccagaatgtaatgtgctgttgaaatgcaag
ataggaaatgtcagaccagaaactgagatcacctggtctaaggacagcattgagattgca
gaggatgatgaggacgctcagaaaattgagagaaaggacgtggatctgacctttaatatc
ggaaagtgggttattaagcaggagaaaccgaaagaaaaaggaaaaaagccaactgcagag
gacgttcccccaccaccaagacccaaaatctccaaggcggatgcaggtatttacgaggtc
ttcctgagggacgacagaggcaaagataagagcaccttcaatctgacagatgcaggatac
caagctgtaatgaatgagctgttcagggttattgccaactcctcctctgaaatcacagtc
gtcagtactgaacatggcatcatcctctcctctatggtcacatattacaatgaggaactg
cgtgttggttggctccaaaaagatgctaagattgccgcctcagagagagttaagtctgga
gtcacaggagagcagctttggcttaaaatcaatgagcccactgagaaggacaagggcaaa
tacaccatggacatctttgatggcaaggacggtgtaaagagagtctttgatctgactggc
aaggcatgggaagaggcatttgaagaattccaaaggctcaaggcggcagcaatcgcagag
agaaatcgcgctcgtgttgttggaggcttgccagatgtggttgcgatccaagagggcaag
tccctgaacctgactggcaatgtctggggcgagccggtacctgaggtaagctggacgaag
aacgatagagagctggtatctgacgagcgctacaaactcaagttcgagcacggcaagttt
gccagcatcacaatcgccgccgtcaccacgactgactcaggcaaatacgccctcctggtc
aagaacaagtacggcacagaagctggcgagttcaccgtcagtgtctacaacccagaagag
gaggagaacaaggaggagaagaaaggctaa
DBGET
integrated database retrieval system
